BLASTX nr result

ID: Zingiber25_contig00037778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037778
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair a...   195   5e-48
ref|XP_004954012.1| PREDICTED: DNA repair and recombination prot...   194   1e-47
dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa ...   193   2e-47
ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] g...   193   2e-47
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo...   193   2e-47
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi...   193   2e-47
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati...   193   2e-47
gb|EMT17728.1| putative DNA repair and recombination RAD54-like ...   192   5e-47
ref|XP_003573054.1| PREDICTED: DNA repair and recombination prot...   192   5e-47
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   191   9e-47
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              191   9e-47
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   191   1e-46
ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Popu...   188   7e-46
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   187   9e-46
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   186   2e-45
ref|XP_006350409.1| PREDICTED: DNA repair and recombination prot...   186   4e-45
ref|XP_004237378.1| PREDICTED: DNA repair and recombination prot...   186   4e-45
ref|XP_006573913.1| PREDICTED: DNA repair and recombination prot...   185   6e-45
ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citr...   184   1e-44
ref|XP_004511286.1| PREDICTED: DNA repair and recombination prot...   184   1e-44

>ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
           protein RAD54-like [Oryza brachyantha]
          Length = 974

 Score =  195 bits (496), Expect = 5e-48
 Identities = 93/102 (91%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLIISYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RRVLLSGTP
Sbjct: 343 QVLIISYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRVLLSGTP 402

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDASYFRRYYEAPII GREPTA
Sbjct: 403 MQNDLEEFFSMVNFTNPGVLGDASYFRRYYEAPIICGREPTA 444


>ref|XP_004954012.1| PREDICTED: DNA repair and recombination protein RAD54-like [Setaria
           italica]
          Length = 972

 Score =  194 bits (492), Expect = 1e-47
 Identities = 91/102 (89%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLIISYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 342 QVLIISYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 401

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEF++MVNFTNPG+LGDASYFRRYYEAPII GREPTA
Sbjct: 402 MQNDLEEFYSMVNFTNPGVLGDASYFRRYYEAPIICGREPTA 443


>dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
          Length = 912

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 349 QVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 408

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 409 MQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA 450


>ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
           gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa
           Japonica Group]
          Length = 879

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 349 QVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 408

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 409 MQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA 450


>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
          Length = 952

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 349 QVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 408

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 409 MQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA 450


>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
          Length = 952

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 349 QVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 408

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 409 MQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA 450


>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
           Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
           [Oryza sativa Japonica Group]
          Length = 980

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF++ GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 349 QVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTP 408

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 409 MQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA 450


>gb|EMT17728.1| putative DNA repair and recombination RAD54-like protein [Aegilops
           tauschii]
          Length = 902

 Score =  192 bits (487), Expect = 5e-47
 Identities = 90/102 (88%), Positives = 97/102 (95%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF+  GSCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 264 QVLIVSYETFRMHSSKFEIPGSCDLLICDEAHRLKNDQTLTNKALAALPCTRRILLSGTP 323

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 324 MQNDLEEFFSMVNFTNPGVLGDAAYFRRYYEAPIIRGREPTA 365


>ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
           [Brachypodium distachyon]
          Length = 965

 Score =  192 bits (487), Expect = 5e-47
 Identities = 90/102 (88%), Positives = 97/102 (95%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLIISYETFRMHSSKF++  SCDLLICDEAHRLKNDQTLTN+AL ALPC RR+LLSGTP
Sbjct: 335 QVLIISYETFRMHSSKFERPASCDLLICDEAHRLKNDQTLTNKALAALPCTRRILLSGTP 394

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFF+MVNFTNPG+LGDA+YFRRYYEAPII GREPTA
Sbjct: 395 MQNDLEEFFSMVNFTNPGVLGDAAYFRRYYEAPIICGREPTA 436


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  191 bits (485), Expect = 9e-47
 Identities = 92/102 (90%), Positives = 95/102 (93%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQTLTNRAL AL C RRVLLSGTP
Sbjct: 296 QVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGTP 355

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFFAMVNFTNPGILGDA+YFRRYYE PII GREPTA
Sbjct: 356 MQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTA 397


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  191 bits (485), Expect = 9e-47
 Identities = 92/102 (90%), Positives = 95/102 (93%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQTLTNRAL AL C RRVLLSGTP
Sbjct: 290 QVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGTP 349

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFFAMVNFTNPGILGDA+YFRRYYE PII GREPTA
Sbjct: 350 MQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTA 391


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  191 bits (484), Expect = 1e-46
 Identities = 91/102 (89%), Positives = 95/102 (93%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQTLTNRAL AL C RR+LLSGTP
Sbjct: 296 QVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRILLSGTP 355

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFFAMVNFTNPGILGDA+YFRRYYE PII GREPTA
Sbjct: 356 MQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTA 397


>ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Populus trichocarpa]
           gi|550341033|gb|ERP62212.1| hypothetical protein
           POPTR_0004s14870g [Populus trichocarpa]
          Length = 932

 Score =  188 bits (477), Expect = 7e-46
 Identities = 88/103 (85%), Positives = 95/103 (92%)
 Frame = +1

Query: 4   FQVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGT 183
           FQVLI+SYETFRMHSSKF  + SCDLLICDEAHRLKNDQT+TNRAL +L C RR+LLSGT
Sbjct: 296 FQVLIVSYETFRMHSSKFSNSESCDLLICDEAHRLKNDQTITNRALASLSCKRRILLSGT 355

Query: 184 PMQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           PMQNDLEEFFAMVNFTNPG+LGDA+YFRRYYE PII GREPTA
Sbjct: 356 PMQNDLEEFFAMVNFTNPGVLGDAAYFRRYYETPIICGREPTA 398


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
           communis] gi|223542157|gb|EEF43701.1| DNA repair and
           recombination protein RAD54B, putative [Ricinus
           communis]
          Length = 940

 Score =  187 bits (476), Expect = 9e-46
 Identities = 90/102 (88%), Positives = 94/102 (92%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  + SCDLLICDEAHRLKNDQTLTNRAL AL C RR+LLSGTP
Sbjct: 304 QVLIVSYETFRMHSSKFSHDESCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTP 363

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEFFAMVNFTNPGILGDA+YFRRYYE PII GREPTA
Sbjct: 364 MQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTA 405


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/104 (87%), Positives = 95/104 (91%)
 Frame = +1

Query: 1   AFQVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSG 180
           + QVLIISYETFRMHSSKF ++ SCDLLICDEAHRLKNDQTLTNRAL AL C RRVLLSG
Sbjct: 293 SLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSG 352

Query: 181 TPMQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           TPMQNDLEEFFAMVNFTNPGILGD S+FRRYYEAPII GREP A
Sbjct: 353 TPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIA 396


>ref|XP_006350409.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
           tuberosum]
          Length = 952

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/102 (86%), Positives = 95/102 (93%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQTLTNRAL +L C RRVLLSGTP
Sbjct: 298 QVLIVSYETFRMHSSKFSNSGSCDLLICDEAHRLKNDQTLTNRALASLACKRRVLLSGTP 357

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEF+AMVNFTNPGILGDA++FRRY+E PII GREPTA
Sbjct: 358 MQNDLEEFYAMVNFTNPGILGDAAHFRRYFETPIICGREPTA 399


>ref|XP_004237378.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
           lycopersicum]
          Length = 956

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/102 (86%), Positives = 95/102 (93%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQTLTNRAL +L C RRVLLSGTP
Sbjct: 300 QVLIVSYETFRMHSSKFSNSGSCDLLICDEAHRLKNDQTLTNRALASLACKRRVLLSGTP 359

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           MQNDLEEF+AMVNFTNPGILGDA++FRRY+E PII GREPTA
Sbjct: 360 MQNDLEEFYAMVNFTNPGILGDAAHFRRYFETPIICGREPTA 401


>ref|XP_006573913.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
           max]
          Length = 890

 Score =  185 bits (469), Expect = 6e-45
 Identities = 87/102 (85%), Positives = 93/102 (91%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF    SCDLLICDEAHRLKNDQT+TNRAL ALPC RR+LLSGTP
Sbjct: 282 QVLIVSYETFRMHSSKFSSTDSCDLLICDEAHRLKNDQTITNRALAALPCKRRILLSGTP 341

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           +QNDLEEFFAMVNFTNPGILGD ++FRRYYEAPII GREP A
Sbjct: 342 LQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAA 383


>ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citrus clementina]
           gi|557524966|gb|ESR36272.1| hypothetical protein
           CICLE_v10027772mg [Citrus clementina]
          Length = 930

 Score =  184 bits (467), Expect = 1e-44
 Identities = 89/104 (85%), Positives = 94/104 (90%)
 Frame = +1

Query: 1   AFQVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSG 180
           + QVLI+SYETFRMHSSKF  + SCDLLICDEAHRLKNDQTLTNRAL AL C RR+LLSG
Sbjct: 296 SLQVLIVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSG 355

Query: 181 TPMQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           TPMQNDLEEFFAMVNFTNPGILGDA+YFRRYYE  II GREPTA
Sbjct: 356 TPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTA 399


>ref|XP_004511286.1| PREDICTED: DNA repair and recombination protein RAD54-like isoform
           X3 [Cicer arietinum]
          Length = 809

 Score =  184 bits (467), Expect = 1e-44
 Identities = 86/102 (84%), Positives = 94/102 (92%)
 Frame = +1

Query: 7   QVLIISYETFRMHSSKFDKNGSCDLLICDEAHRLKNDQTLTNRALGALPCLRRVLLSGTP 186
           QVLI+SYETFRMHSSKF  +GSCDLLICDEAHRLKNDQT+TNRAL ALPC RR+LLSGTP
Sbjct: 133 QVLIVSYETFRMHSSKFSSSGSCDLLICDEAHRLKNDQTITNRALAALPCKRRILLSGTP 192

Query: 187 MQNDLEEFFAMVNFTNPGILGDASYFRRYYEAPIISGREPTA 312
           +QNDLEEFFAMVNFTNPGIL D ++FRRY+EAPII GREP A
Sbjct: 193 LQNDLEEFFAMVNFTNPGILSDIAHFRRYFEAPIICGREPAA 234


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