BLASTX nr result

ID: Zingiber25_contig00037615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037615
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA30522.1| ORF 143 [Glycine max]                                 157   2e-39
gb|AFK49064.1| unknown [Lotus japonicus]                              157   3e-39
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m...   106   3e-21
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]        100   3e-19
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm...   100   3e-19
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]      80   3e-13
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr...    63   8e-13
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic...    76   5e-12
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB...    72   8e-11
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun...    40   5e-10
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re...    39   1e-08

>emb|CAA30522.1| ORF 143 [Glycine max]
          Length = 143

 Score =  157 bits (398), Expect(2) = 2e-39
 Identities = 76/84 (90%), Positives = 79/84 (94%)
 Frame = +1

Query: 52  TLHYFGNLRTRPYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDES 231
           TLHYFGN RT+ YGYVKYRISNPSRKR  TDTQF+VSKQNSILD+IDTYRILWKAVFDES
Sbjct: 59  TLHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDES 118

Query: 232 RMYGLEGDLSYLSRSTLQYGVKKP 303
           RMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 119 RMYGLEGDLSYLSRSTLQYGAKKP 142



 Score = 30.4 bits (67), Expect(2) = 2e-39
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +3

Query: 3  FRTGPSQIAMIRSTSFY 53
          FR GPSQIAMIRST  Y
Sbjct: 46 FRIGPSQIAMIRSTLHY 62


>gb|AFK49064.1| unknown [Lotus japonicus]
          Length = 128

 Score =  157 bits (396), Expect(2) = 3e-39
 Identities = 77/84 (91%), Positives = 80/84 (95%)
 Frame = +1

Query: 52  TLHYFGNLRTRPYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDES 231
           TLHYF NLRT+ YGYVKYRISNPS+KRRETDTQF+VSKQNSILDLIDTYRIL KAVFDES
Sbjct: 44  TLHYFENLRTQSYGYVKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDES 103

Query: 232 RMYGLEGDLSYLSRSTLQYGVKKP 303
           RMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 104 RMYGLEGDLSYLSRSTLQYGAKKP 127



 Score = 30.8 bits (68), Expect(2) = 3e-39
 Identities = 15/22 (68%), Positives = 15/22 (68%)
 Frame = +3

Query: 3  FRTGPSQIAMIRSTSFYITLFR 68
          FR GPSQIAMIRST  Y    R
Sbjct: 31 FRLGPSQIAMIRSTLHYFENLR 52


>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
          Length = 57

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +1

Query: 142 DTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 303
           DTQFKVSKQNSILDLID YRILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2   DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55


>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
          Length = 53

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/52 (92%), Positives = 48/52 (92%)
 Frame = -3

Query: 231 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRSSP 76
           TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPFPAR GNPVF ISIRSSP
Sbjct: 2   TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53


>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
           gi|223541020|gb|EEF42577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -3

Query: 222 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRSSP*VSEIV 58
           EYGF QNSICIYEIEYGILFTHFKLSI  PPFPARIGNPVFYISIR SP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286


>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
          Length = 40

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +1

Query: 187 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 303
           IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1   IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39


>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
           gi|134093268|ref|YP_001109569.1| hypothetical protein
           Poptr_cp092 [Populus trichocarpa]
           gi|133712111|gb|ABO36754.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712130|gb|ABO36773.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 65

 Score = 63.2 bits (152), Expect(2) = 8e-13
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +2

Query: 56  YTISET*GLDRMDM*NTGFPILAGKGGKRILNLK 157
           YTISET GL+RMDM NTGFPILAGKGGKRILNLK
Sbjct: 32  YTISETQGLNRMDMENTGFPILAGKGGKRILNLK 65



 Score = 35.8 bits (81), Expect(2) = 8e-13
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 3  FRTGPSQIAMIRSTSFY 53
          FR GPSQIAMIRSTSFY
Sbjct: 16 FRAGPSQIAMIRSTSFY 32


>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
           gi|575882162|emb|CDL78835.1| ribosomal protein S12
           (chloroplast) [Pinguicula ehlersiae]
          Length = 156

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +1

Query: 184 LIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 303
           +IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155


>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
           koraiensis]
          Length = 40

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 191 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 304
           + IE CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1   MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38


>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
           gi|150251552|ref|YP_001312284.1| hypothetical protein
           CYtaCp120 [Cycas taitungensis]
           gi|149941571|dbj|BAF64995.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941602|dbj|BAF65026.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
          Length = 64

 Score = 39.7 bits (91), Expect(3) = 5e-10
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = -2

Query: 139 FPSFSC*DWKSCILHIHTVESLGFRNSVM*KEV 41
           F  FSC DWKS ILHI T++SLG + SV  K V
Sbjct: 15  FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSV 47



 Score = 36.2 bits (82), Expect(3) = 5e-10
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 50 KRSASNHCYLTRTCSK 3
          K+S SNHCYLTRTCSK
Sbjct: 44 KKSVSNHCYLTRTCSK 59



 Score = 33.1 bits (74), Expect(3) = 5e-10
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -3

Query: 177 YGILFTHFKLSIRFPPF 127
           Y ILFTHFKLSIRF PF
Sbjct: 2   YIILFTHFKLSIRFLPF 18


>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
           gi|372863084|gb|AEX99157.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 60

 Score = 38.5 bits (88), Expect(3) = 1e-08
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 139 FPSFSC*DWKSCILHIHTVESLGFRNSVM 53
           F  FSC DWKS ILHI T++SLG + SV+
Sbjct: 15  FLPFSCYDWKSRILHICTIKSLGSQKSVV 43



 Score = 33.1 bits (74), Expect(3) = 1e-08
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -3

Query: 177 YGILFTHFKLSIRFPPF 127
           Y ILFTHFKLSIRF PF
Sbjct: 2   YIILFTHFKLSIRFLPF 18



 Score = 32.7 bits (73), Expect(3) = 1e-08
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -1

Query: 50 KRSASNHCYLTRTCSK 3
          K   SNHCYLTRTCSK
Sbjct: 40 KSVVSNHCYLTRTCSK 55


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