BLASTX nr result
ID: Zingiber25_contig00037544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00037544
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK38771.1| unknown [Medicago truncatula] 67 3e-09
gb|AFK35050.1| unknown [Medicago truncatula] 67 3e-09
ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago tru... 67 3e-09
ref|XP_004251818.1| PREDICTED: ras-related protein RABB1c-like [... 66 4e-09
dbj|BAO02541.1| predicted Rab2 GTPase ortholog, partial [Nicotia... 66 5e-09
gb|EOY29042.1| RAB GTPase B1C isoform 1 [Theobroma cacao] 66 5e-09
gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum] 66 5e-09
ref|XP_006360009.1| PREDICTED: ras-related protein RABB1c-like [... 65 1e-08
ref|XP_004293420.1| PREDICTED: ras-related protein RABB1c-like [... 65 1e-08
ref|XP_004248216.1| PREDICTED: ras-related protein RABB1c-like [... 65 1e-08
ref|XP_004243219.1| PREDICTED: ras-related protein RABB1c-like [... 65 1e-08
gb|AFK45102.1| unknown [Lotus japonicus] 65 1e-08
gb|AFK35655.1| unknown [Lotus japonicus] 65 1e-08
ref|XP_002525225.1| protein with unknown function [Ricinus commu... 65 1e-08
ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis... 65 1e-08
ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [... 65 1e-08
ref|NP_001238167.1| guanine nucleotide regulatory protein [Glyci... 65 1e-08
gb|ESW19562.1| hypothetical protein PHAVU_006G135400g [Phaseolus... 64 2e-08
ref|XP_006414265.1| hypothetical protein EUTSA_v10025789mg [Eutr... 64 2e-08
ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana] g... 64 2e-08
>gb|AFK38771.1| unknown [Medicago truncatula]
Length = 211
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ G CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ G CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor,
interaction region [Medicago truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago
truncatula] gi|355483401|gb|AES64604.1| Small GTP
binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ G CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>ref|XP_004251818.1| PREDICTED: ras-related protein RABB1c-like [Solanum lycopersicum]
gi|565366669|ref|XP_006350009.1| PREDICTED: ras-related
protein RABB1c-like [Solanum tuberosum]
Length = 211
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGACCS 211
>dbj|BAO02541.1| predicted Rab2 GTPase ortholog, partial [Nicotiana alata]
Length = 48
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CCS
Sbjct: 12 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCS 48
>gb|EOY29042.1| RAB GTPase B1C isoform 1 [Theobroma cacao]
Length = 211
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG SSQG CC+
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGSSSQGGGCCN 211
>gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCS 211
>ref|XP_006360009.1| PREDICTED: ras-related protein RABB1c-like [Solanum tuberosum]
Length = 165
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CC+
Sbjct: 129 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCT 165
>ref|XP_004293420.1| PREDICTED: ras-related protein RABB1c-like [Fragaria vesca subsp.
vesca] gi|568825727|ref|XP_006467229.1| PREDICTED:
ras-related protein RABB1c-like [Citrus sinensis]
gi|462407914|gb|EMJ13248.1| hypothetical protein
PRUPE_ppa011412mg [Prunus persica]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG SSQ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
>ref|XP_004248216.1| PREDICTED: ras-related protein RABB1c-like [Solanum lycopersicum]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CC+
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCT 211
>ref|XP_004243219.1| PREDICTED: ras-related protein RABB1c-like [Solanum lycopersicum]
gi|565402587|ref|XP_006366756.1| PREDICTED: ras-related
protein RABB1c-like [Solanum tuberosum]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG +SQG CC+
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCT 211
>gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>ref|XP_002525225.1| protein with unknown function [Ricinus communis]
gi|223535522|gb|EEF37191.1| protein with unknown
function [Ricinus communis]
Length = 164
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG SSQ CCS
Sbjct: 128 VFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 164
>ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product
[Vitis vinifera]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDG SSQ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
>ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory
protein [Glycine max]
Length = 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gb|ESW19562.1| hypothetical protein PHAVU_006G135400g [Phaseolus vulgaris]
Length = 211
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCCS 112
VFDVSNESYGIK+GYGG GPS GRDGPS+ CCS
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGPSAAAGGCCS 211
>ref|XP_006414265.1| hypothetical protein EUTSA_v10025789mg [Eutrema salsugineum]
gi|557115435|gb|ESQ55718.1| hypothetical protein
EUTSA_v10025789mg [Eutrema salsugineum]
Length = 310
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCC 109
VFDVSNESYGIK+GYGG GPS GRDG +SQG CC
Sbjct: 274 VFDVSNESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 309
>ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein
ARALYDRAFT_493160 [Arabidopsis lyrata subsp. lyrata]
gi|565445912|ref|XP_006284528.1| hypothetical protein
CARUB_v10005730mg [Capsella rubella]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName:
Full=Ras-related protein RABB1c; Short=AtRABB1c;
AltName: Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein
[Arabidopsis thaliana] gi|5281023|emb|CAB45962.1|
GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like
protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like
protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis
thaliana] gi|297313917|gb|EFH44340.1| hypothetical
protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata] gi|332658457|gb|AEE83857.1| RAB GTPase homolog
B1C [Arabidopsis thaliana] gi|482553233|gb|EOA17426.1|
hypothetical protein CARUB_v10005730mg [Capsella
rubella]
Length = 211
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 2 VFDVSNESYGIKIGYGGNTGPSDGRDGPSSQGAPCC 109
VFDVSNESYGIK+GYGG GPS GRDG +SQG CC
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210