BLASTX nr result

ID: Zingiber25_contig00037388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037388
         (293 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT26479.1| hypothetical protein F775_02917 [Aegilops tauschii]     56   6e-06
ref|XP_004977992.1| PREDICTED: protein SET DOMAIN GROUP 41-like ...    55   1e-05

>gb|EMT26479.1| hypothetical protein F775_02917 [Aegilops tauschii]
          Length = 898

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
 Frame = -3

Query: 282 AMEMQARKEVGXXXXXXXXXXXXXXXLHRRFFSSHCAGCFRPLE----FPFPCAGCRGVT 115
           AMEM+AR+ VG               LH  F  SHC+ CFR L     +   C  C  V 
Sbjct: 2   AMEMRARESVGMSEDLTRAISPYATALHDAFLHSHCSSCFRKLPSQPPYAMSCMLCCSV- 60

Query: 114 HYCDASCCAADFPAHYSSGECHFLRLHHEGDS--------SDIRAA 1
            YC + C ++D   H SSGEC F   H +  S        SD+RA+
Sbjct: 61  QYCCSDCLSSDREMHSSSGECCFFADHLKKASPSYITEGTSDVRAS 106


>ref|XP_004977992.1| PREDICTED: protein SET DOMAIN GROUP 41-like [Setaria italica]
          Length = 678

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/106 (36%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
 Frame = -3

Query: 282 AMEMQARKEVGXXXXXXXXXXXXXXXLHRRFFSSHCAGCFRPLEFPFPCA----GCRGVT 115
           AMEM+AR+ V                LH  F  SHC+ CF  L    PC      C  V 
Sbjct: 2   AMEMRARESVNMSEDLTGAIAPYAIALHDVFLHSHCSSCFSELPPQSPCVMSCTTCCSV- 60

Query: 114 HYCDASCCAADFPAHYSSGECHFLRLHHEGDS--------SDIRAA 1
            YC + C ++D   HYSSGEC F   H +  S        SD+RAA
Sbjct: 61  RYCCSECLSSDSLVHYSSGECCFFVEHLKRASPNYVTEGTSDLRAA 106


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