BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037313
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   216   3e-54
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   216   3e-54
gb|ESW03326.1| hypothetical protein PHAVU_011G004900g [Phaseolus...   214   8e-54
gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein...   214   1e-53
gb|AHB18407.1| pentatricopeptide repeat-containing protein [Goss...   211   6e-53
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   211   6e-53
gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus pe...   207   1e-51
ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Popu...   207   2e-51
ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containi...   204   1e-50
ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, part...   202   5e-50
ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutr...   199   3e-49
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
gb|ACU21163.1| unknown [Glycine max]                                  199   3e-49
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   199   4e-49
ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containi...   198   6e-49
ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citr...   198   6e-49
ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,...   197   1e-48
ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabido...   197   2e-48

>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  216 bits (550), Expect = 3e-54
 Identities = 107/177 (60%), Positives = 131/177 (74%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           ++ +ALD +LTDLE ++D G+  DP + SSLLE C Q++++  G R+HRLIP        
Sbjct: 30  SKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNV 89

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+ G +E AH+VFD+M  RN S AF WNSL+SGY ELG++EDA+ALY QM
Sbjct: 90  GISSKLLRLYASFGYMEDAHQVFDEMGNRNFS-AFAWNSLISGYAELGLYEDALALYFQM 148

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD +TFPRVLKAC GIGSI+ GEAVHRH+VRSGF  D FVLNALVDMYSKC
Sbjct: 149 EEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKC 205



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/160 (28%), Positives = 79/160 (49%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  + S+  G  +HR +                  Y+ CG I 
Sbjct: 150 EEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIV 209

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           +A +VFDQ+  ++      WNS+L+GY   G+H +A+ ++ QM +EG EPD      +L 
Sbjct: 210 RARKVFDQIEYKD---IVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLL- 265

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
             + I S++    +H  ++R G   +  + N+L+ MY+KC
Sbjct: 266 --SNISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKC 303



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
 Frame = +3

Query: 213 YAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDE 392
           YA CG++ +A  +F QMPQ++      WNS++S +       +A+  +  ME  GV PD 
Sbjct: 300 YAKCGKLNRAKWLFQQMPQKDM---VSWNSIISAHFNSA---EALTYFEVMESLGVSPDG 353

Query: 393 YTFPRVLKACAGIGSIRHGEAVH-----RHLVRSGFGHDAFVLN 509
            TF  +L  CA +G ++ G  ++     ++ +R    H A ++N
Sbjct: 354 VTFVSLLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVN 397


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  216 bits (550), Expect = 3e-54
 Identities = 107/177 (60%), Positives = 131/177 (74%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           ++ +ALD +LTDLE ++D G+  DP + SSLLE C Q++++  G R+HRLIP        
Sbjct: 30  SKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNV 89

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+ G +E AH+VFD+M  RN S AF WNSL+SGY ELG++EDA+ALY QM
Sbjct: 90  GISSKLLRLYASFGYMEDAHQVFDEMGNRNFS-AFAWNSLISGYAELGLYEDALALYFQM 148

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD +TFPRVLKAC GIGSI+ GEAVHRH+VRSGF  D FVLNALVDMYSKC
Sbjct: 149 EEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKC 205



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/160 (28%), Positives = 79/160 (49%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  + S+  G  +HR +                  Y+ CG I 
Sbjct: 150 EEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIV 209

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           +A +VFDQ+  ++      WNS+L+GY   G+H +A+ ++ QM +EG EPD      +L 
Sbjct: 210 RARKVFDQIEYKD---IVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLL- 265

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
             + I S++    +H  ++R G   +  + N+L+ MY+KC
Sbjct: 266 --SNISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKC 303



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
 Frame = +3

Query: 213 YAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDE 392
           YA CG++ +A  +F QMPQ++      WNS++S +       +A+  +  ME  GV PD 
Sbjct: 300 YAKCGKLNRAKWLFQQMPQKDM---VSWNSIISAHFNSA---EALTYFEVMESLGVSPDG 353

Query: 393 YTFPRVLKACAGIGSIRHGEAVH-----RHLVRSGFGHDAFVLN 509
            TF  +L  CA +G ++ G  ++     ++ +R    H A ++N
Sbjct: 354 VTFVSLLSTCAHLGLVKEGGKLYFLMKGKYGIRPTIEHYACMVN 397


>gb|ESW03326.1| hypothetical protein PHAVU_011G004900g [Phaseolus vulgaris]
          Length = 522

 Score =  214 bits (546), Expect = 8e-54
 Identities = 102/177 (57%), Positives = 134/177 (75%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T++EAL++++TDLE +L++G+  DP + +SLLE C +++++  G RLHRLIP        
Sbjct: 62  TQSEALEQVITDLEDSLEKGIRIDPEIYASLLEICYRLQAIRPGIRLHRLIPTSLLHRNF 121

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YAACG ++ AH +FDQM +R+ S AFPWNSL+SGY ++G+++DA+ALY QM
Sbjct: 122 GISSKLLRLYAACGLVDDAHELFDQMAKRDTS-AFPWNSLISGYAQMGLYDDAIALYFQM 180

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
            EEGVEPD +TFPRVLK CAGIGS+R GE VHRHLVR+GF  D FVLNALVDMYSKC
Sbjct: 181 VEEGVEPDLFTFPRVLKVCAGIGSVRVGEEVHRHLVRAGFATDGFVLNALVDMYSKC 237



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/159 (28%), Positives = 77/159 (48%)
 Frame = +3

Query: 54  LDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQI 233
           ++ GV  D      +L+ C  + S+  G  +HR +                  Y+ CG I
Sbjct: 181 VEEGVEPDLFTFPRVLKVCAGIGSVRVGEEVHRHLVRAGFATDGFVLNALVDMYSKCGDI 240

Query: 234 EKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVL 413
            KA ++FD+MP R+   +  WNS+L+ YV  G+   A+ ++ QM  +G EPD  +   +L
Sbjct: 241 VKAQKIFDKMPHRD---SISWNSMLTAYVHHGLEVGAVNIFRQMILDGCEPDSVSVSTIL 297

Query: 414 KACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
               G+ S   G  +H  ++R G   +  + N+L+ MYS
Sbjct: 298 ---TGVSSPCLGVQIHGWVIRRGLDWNLSIANSLMVMYS 333



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/138 (31%), Positives = 71/138 (51%)
 Frame = +3

Query: 45  EVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAAC 224
           ++ LD   P   S+S+ L    T + S   G ++H  +                  Y++ 
Sbjct: 280 QMILDGCEPDSVSVSTIL----TGVSSPCLGVQIHGWVIRRGLDWNLSIANSLMVMYSSH 335

Query: 225 GQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFP 404
           G++EKA  +F+ MP+R+      WNS++S + +     +A+  + QMEE GVEPD+ TF 
Sbjct: 336 GRLEKARWIFNLMPERD---VVSWNSIISAHCK---RREALEFFEQMEEAGVEPDKITFV 389

Query: 405 RVLKACAGIGSIRHGEAV 458
            VL ACA +G ++ GE V
Sbjct: 390 SVLSACAYLGLVKEGERV 407


>gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 773

 Score =  214 bits (544), Expect = 1e-53
 Identities = 102/177 (57%), Positives = 130/177 (73%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +ALD ++ DLE ++  G+     + SSLLETC Q++S+ QG ++H L+P        
Sbjct: 316 TKLQALDAVVKDLEASVKNGMNITSEIFSSLLETCYQLKSIDQGIKIHNLVPKTLLRKNT 375

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+CG IE AH+VFD+M +RN+S AFPWNSL+SGY ELG +EDA+A+Y QM
Sbjct: 376 GISSKLLRLYASCGHIESAHQVFDEMSKRNES-AFPWNSLISGYAELGQYEDALAIYFQM 434

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD YTFPR LKACAGIG I+ GEAVHR +VR GFG+D FVLNAL+DMY+KC
Sbjct: 435 EEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGNDGFVLNALIDMYAKC 491



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 45/158 (28%), Positives = 74/158 (46%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D       L+ C  +  +  G  +HR +                  YA CG I 
Sbjct: 436 EEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGNDGFVLNALIDMYAKCGDIV 495

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA RVFD +  ++      WNS+L+GY+  G+  +A+ ++  M  EG EPD      +L 
Sbjct: 496 KARRVFDNIACKD---TVSWNSMLTGYIRHGLLVEALEVFRGMIREGYEPDPVAMSTIL- 551

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
             +G+ S++    +H  ++R G   +  V+NAL+ +YS
Sbjct: 552 --SGVWSLKIALQIHGWILRRGNEWNLSVVNALIVVYS 587


>gb|AHB18407.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 522

 Score =  211 bits (538), Expect = 6e-53
 Identities = 100/177 (56%), Positives = 130/177 (73%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +A+D ++ DLE ++ +G+  D  + SSLLETC Q++S+  G  +HRL+P        
Sbjct: 65  TKLQAVDSIVKDLEASVKKGIIIDSEIFSSLLETCYQLKSIDHGIAIHRLVPQNLLRKNT 124

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA  G++E AH+VFDQM +RN+ +AFPWNSL+SGY ELG +EDA+ALY QM
Sbjct: 125 GISSKLLRLYATAGRMESAHQVFDQMSKRNE-YAFPWNSLISGYAELGQYEDALALYFQM 183

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD +TFPR LKACAGIGSI  G+AVHR +VR GFG+D FVLNAL+DMY+KC
Sbjct: 184 EEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDVFVLNALIDMYAKC 240



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/158 (29%), Positives = 74/158 (46%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D       L+ C  + S+  G  +HR +                  YA CG I 
Sbjct: 185 EEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDVFVLNALIDMYAKCGDIV 244

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA RVFD +  ++      WNS+L+GY+  G+   A+ ++  M +EG EPD  T   +L 
Sbjct: 245 KARRVFDSIACKDN---ISWNSMLTGYIRHGLLAGALQVFRGMIQEGFEPDSVTISTILS 301

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
           +     S++    +H  ++R G   D  V+NA++ +YS
Sbjct: 302 SFC---SLKTAAQIHGWVLRRGIEWDTSVVNAMIVVYS 336



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/142 (26%), Positives = 67/142 (47%)
 Frame = +3

Query: 69  PFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHR 248
           P   ++S+ L   C    SL   A++H  +                  Y+  G+++ A  
Sbjct: 291 PDSVTISTILSSFC----SLKTAAQIHGWVLRRGIEWDTSVVNAMIVVYSNLGKLDGASW 346

Query: 249 VFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAG 428
           +F +MP+R+      WNS++SG+ +   + +A+  + QM      PD  TF  +L ACA 
Sbjct: 347 LFQRMPERD---IVSWNSIISGHSK---NPEALLYFEQMVRSCTSPDSITFVAILSACAH 400

Query: 429 IGSIRHGEAVHRHLVRSGFGHD 494
           +G ++ GE +   L+R  +G D
Sbjct: 401 LGLVKDGERLF-WLMRKKYGID 421


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  211 bits (538), Expect = 6e-53
 Identities = 104/177 (58%), Positives = 128/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +AL+ LL DL+ ++  G+  D  + SSLLETC Q+++   G R+HRLIP        
Sbjct: 55  TKLQALEALLRDLQASIQDGITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSV 114

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+ G+IE+AHR+FDQM +RN+S AF WNSL+SGY ELG++EDAMALY QM
Sbjct: 115 ALSSKLLRLYASIGRIEEAHRLFDQMSRRNRS-AFAWNSLISGYAELGLYEDAMALYFQM 173

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGV PD +TFPRVLKAC GIGSI  GE VHRH+VR GF  D FVLNALVDMY+KC
Sbjct: 174 EEEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKC 230



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/158 (27%), Positives = 78/158 (49%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  + S+S G  +HR +                  YA CG I 
Sbjct: 175 EEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIV 234

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA +VFD++  R+   +  WNS+L+GY+  G+   A++++ +M + G EPD      V+ 
Sbjct: 235 KARKVFDKIVCRD---SVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVV- 290

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
              G+ S++    +H  ++R G   +  + N+L+ +YS
Sbjct: 291 --TGVPSLKLAGQIHGWVLRRGVQWNLSIANSLIVLYS 326


>gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score =  207 bits (527), Expect = 1e-51
 Identities = 103/177 (58%), Positives = 129/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +ALD ++ DLE A+ +G+  D    +SLLETC Q +++  G R+HRLIP        
Sbjct: 60  TKLQALDAVVNDLEAAIGKGINVDTETFASLLETCYQFQAMDYGLRVHRLIPRSVLRRNV 119

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+ G IE+AH+VFD+MP+R+ S AF WNSL+SGY ELG++EDAMALY QM
Sbjct: 120 GISSKLLRLYASHGYIEEAHQVFDEMPKRDVS-AFAWNSLISGYAELGLYEDAMALYFQM 178

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD +TFPRVLKAC GIG I+ GEAVHRH+VR G  +D FVLNALVDMY+KC
Sbjct: 179 EEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKC 235



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/158 (26%), Positives = 70/158 (44%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  +  +  G  +HR I                  YA CG I 
Sbjct: 180 EEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIV 239

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA +VFD++  R+      WN++L+ Y+  G+   A+ ++H+M  EG + D      +L 
Sbjct: 240 KARKVFDKITSRDH---VSWNTMLTSYMRHGLLSQALDIFHEMLHEGHQADSVAISTILG 296

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
           A     S+     +H  ++R G   +  + NAL+  YS
Sbjct: 297 AAE--SSLEIVIQIHGWVIRQGVEWNLSIANALIAAYS 332


>ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Populus trichocarpa]
           gi|550322722|gb|EEF06534.2| hypothetical protein
           POPTR_0015s14630g [Populus trichocarpa]
          Length = 529

 Score =  207 bits (526), Expect = 2e-51
 Identities = 99/177 (55%), Positives = 131/177 (74%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ EAL+ ++ DL+ ++++G+  D  + SSLLETC ++ ++  G ++HRLIP        
Sbjct: 72  TQLEALENVIKDLQSSMEKGIRIDTQIFSSLLETCYRLNAIELGVKIHRLIPINLLRRNA 131

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    Y++CG +E AH+VFD+M +R +S AFPWNSL++GY E G++EDAMALY QM
Sbjct: 132 GISSKLVRLYSSCGDVEVAHQVFDEMFKRGES-AFPWNSLIAGYTESGLYEDAMALYFQM 190

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD++TFPRVLKAC GIG IR GEAVHR LVR GF +D FVLNALVDMY+KC
Sbjct: 191 EEEGVEPDQFTFPRVLKACGGIGLIRIGEAVHRDLVRLGFVNDGFVLNALVDMYAKC 247



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/158 (27%), Positives = 73/158 (46%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  +  +  G  +HR +                  YA CG I 
Sbjct: 192 EEGVEPDQFTFPRVLKACGGIGLIRIGEAVHRDLVRLGFVNDGFVLNALVDMYAKCGDIV 251

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA R+FD++  ++   +  WNS+L+GY+  G+  +A+  +H M  +G+E D      +L 
Sbjct: 252 KARRIFDKIDCKD---SISWNSMLTGYIRHGLIAEALHTFHSMVHDGMELDSVAVSTIL- 307

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
             A + S      +H  +VR G   D  + N+L+ +YS
Sbjct: 308 --ANVSSFEVAVQIHGWIVRRGMEWDFSIANSLIAVYS 343


>ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cicer arietinum]
          Length = 520

 Score =  204 bits (518), Expect = 1e-50
 Identities = 96/177 (54%), Positives = 131/177 (74%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ + L+++L DLE ++++G+  D  + +SLLETC + ++++ G RLHRLIP        
Sbjct: 61  TKFQVLEQVLNDLEGSIEKGITIDTEIYASLLETCYRFQAINHGIRLHRLIPPTLLHRNV 120

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+ G ++ AH +FDQM +R+  +AFPWNSL+SGY +LG+++DA+ALY QM
Sbjct: 121 GISSKLVRLYASFGHMDDAHDLFDQMTKRDM-YAFPWNSLISGYAQLGLYDDAIALYFQM 179

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
            EEGVEPD +TFPRVLK C GIGS++ GE VHRH+VRSGFG+D FVLNALVDMYSKC
Sbjct: 180 VEEGVEPDLFTFPRVLKVCGGIGSVQVGEEVHRHIVRSGFGNDGFVLNALVDMYSKC 236



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/159 (28%), Positives = 79/159 (49%)
 Frame = +3

Query: 54  LDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQI 233
           ++ GV  D      +L+ C  + S+  G  +HR I                  Y+ CG I
Sbjct: 180 VEEGVEPDLFTFPRVLKVCGGIGSVQVGEEVHRHIVRSGFGNDGFVLNALVDMYSKCGDI 239

Query: 234 EKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVL 413
            KA +VF+++P R+   +  WNS+L+ YV  G+  +A+ ++ QM  EG  PD ++   +L
Sbjct: 240 VKARKVFNKIPFRD---SVSWNSMLAAYVHHGLEVEAINIFRQMLLEGKRPDFFSISVIL 296

Query: 414 KACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
               G+ S+  G  +H  ++R G   +  + N+L+ +YS
Sbjct: 297 ---TGVSSLDVGVQIHGWVIRRGVEWNLSIANSLIVVYS 332



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/114 (29%), Positives = 59/114 (51%)
 Frame = +3

Query: 111 TQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAF 290
           T + SL  G ++H  +                  Y+  G+++KA  +F+ MP+R+     
Sbjct: 297 TGVSSLDVGVQIHGWVIRRGVEWNLSIANSLIVVYSNHGRLDKARSIFNLMPERD---VV 353

Query: 291 PWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIGSIRHGE 452
            WNS++S + +   H +A+  + +MEE G  PD+ TF  +L ACA +G ++ GE
Sbjct: 354 SWNSIISAHCK---HPEAIGYFEKMEEAGEVPDKITFVSLLSACAHLGLVKDGE 404


>ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 522

 Score =  202 bits (515), Expect = 3e-50
 Identities = 99/177 (55%), Positives = 128/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +AL+ ++ +LE + + G+  D    +SLLETC ++ ++    R+HRLIP        
Sbjct: 63  TKLQALEAIIKELETSSENGIDVDTETFASLLETCYKLDAMDYCLRVHRLIPRNLLRRNV 122

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+CG +E+AH+VFD+MP+R+ S AF WNSL+SGY ELG++EDAMALY QM
Sbjct: 123 GLSSKLLRLYASCGFVEEAHQVFDEMPKRDVS-AFAWNSLISGYAELGLYEDAMALYFQM 181

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD +TFPRVLKAC GIG ++ GEAVHRHLVR GF  D FVLNALVDMY+KC
Sbjct: 182 EEEGVEPDRFTFPRVLKACGGIGFVQVGEAVHRHLVRLGFVGDRFVLNALVDMYAKC 238



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 41/158 (25%), Positives = 72/158 (45%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  +  +  G  +HR +                  YA CG I 
Sbjct: 183 EEGVEPDRFTFPRVLKACGGIGFVQVGEAVHRHLVRLGFVGDRFVLNALVDMYAKCGDIG 242

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA +VFD++  R+K     WN++L+ Y+  G+   A+ ++HQM +E  +PD      +L 
Sbjct: 243 KARKVFDKIGSRDK---VSWNTMLTAYMRHGLLLQALDIFHQMVKERFQPDSVAISAIL- 298

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
             + + S+     +H   +R G   +   +N+L+  YS
Sbjct: 299 --SEVPSLELVVQIHGWAIRQGVEWNLSTVNSLIAAYS 334


>ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, partial [Capsella rubella]
           gi|482551489|gb|EOA15682.1| hypothetical protein
           CARUB_v10006372mg, partial [Capsella rubella]
          Length = 533

 Score =  202 bits (513), Expect = 5e-50
 Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPF-DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXX 182
           T+ EALD ++TDLE +  +G+ F +P + +SLLETC  +R++  G R+H LIP       
Sbjct: 73  TKLEALDSVITDLETSAQKGISFSEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 132

Query: 183 XXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQ 362
                     YA+CG  E AH VFD+M +R  S  F WNSL+SGY ELG +EDA+ALY Q
Sbjct: 133 LGISSKLVRLYASCGYTEVAHEVFDRMSKRELS-PFAWNSLISGYAELGQYEDALALYFQ 191

Query: 363 MEEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           M E+GV+PD +TFPRVLKACAGIGSI+ G+A+HR LV++GFG+D +VLNALVDMY+KC
Sbjct: 192 MAEDGVKPDRFTFPRVLKACAGIGSIQIGDAIHRDLVKAGFGYDVYVLNALVDMYAKC 249



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 52/170 (30%), Positives = 82/170 (48%)
 Frame = +3

Query: 24  DRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXX 203
           D L    ++A D GV  D      +L+ C  + S+  G  +HR +               
Sbjct: 184 DALALYFQMAED-GVKPDRFTFPRVLKACAGIGSIQIGDAIHRDLVKAGFGYDVYVLNAL 242

Query: 204 XXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVE 383
              YA CG I K   VFD +P ++      WNS+L+GY+  G+  +A+ ++  M ++G+E
Sbjct: 243 VDMYAKCGDIVKGRNVFDMIPHKDY---VSWNSMLTGYLHHGLLLEALDIFRLMVQDGIE 299

Query: 384 PDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
           PD+     VL   A + S +HG  +H  ++R G   +  V NAL+  YSK
Sbjct: 300 PDKVAISSVL---ARVLSFKHGRQLHGWVIRRGIEWELSVANALIVFYSK 346


>ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutrema salsugineum]
           gi|557114493|gb|ESQ54776.1| hypothetical protein
           EUTSA_v10024921mg [Eutrema salsugineum]
          Length = 523

 Score =  199 bits (507), Expect = 3e-49
 Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPF-DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXX 182
           T+ EAL  ++TDLE +  +G+   +P + +SLLETC  +R++  G R+HRLIP       
Sbjct: 63  TQLEALSSVITDLETSARKGITISEPEIFASLLETCYSLRAIDLGVRVHRLIPVHLLRNN 122

Query: 183 XXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQ 362
                     YA+CG  E AH VFD+M +R KS AF WNSL+SGY E G +EDAMALY Q
Sbjct: 123 LGISSKLVRLYASCGYAEVAHEVFDRMSKR-KSSAFAWNSLISGYAESGQYEDAMALYFQ 181

Query: 363 MEEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           M EEGV+PD +TFPRVLKAC GIGSI+ GEA+HR LV+ G+G+D +VLNALVDMY+KC
Sbjct: 182 MAEEGVKPDRFTFPRVLKACGGIGSIQIGEAIHRDLVKQGYGYDVYVLNALVDMYAKC 239



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/159 (31%), Positives = 79/159 (49%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  + S+  G  +HR +                  YA CG I 
Sbjct: 184 EEGVKPDRFTFPRVLKACGGIGSIQIGEAIHRDLVKQGYGYDVYVLNALVDMYAKCGDIV 243

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           K   VFD +P  NK +   WNS+L+ Y+  G+ ++AM ++  M ++G+EPD+     VL 
Sbjct: 244 KGRNVFDMIP--NKDYV-SWNSMLTSYLHHGLLQEAMHIFRLMVQDGIEPDKVAISSVL- 299

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
             A + S +HG  +H   +R G   +  V+NAL+ +YSK
Sbjct: 300 --ARVLSFKHGRQLHGWAIRRGMECELSVVNALIVLYSK 336


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  199 bits (506), Expect = 3e-49
 Identities = 93/177 (52%), Positives = 129/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ EAL++++ DLE ++++G+  DP + +SLLETC + +++  G R+HRLIP        
Sbjct: 66  TKLEALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNV 125

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+CG ++ AH +FDQM +R+ S AFPWNSL+SGY ++G +++A+ALY QM
Sbjct: 126 GISSKLLRLYASCGYLDDAHDLFDQMAKRDTS-AFPWNSLISGYAQVGHYDEAIALYFQM 184

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
            EEGVE D +TFPRVLK CAGIGS++ GE VHRH +R+GF  D F+LNALVDMYSKC
Sbjct: 185 VEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKC 241



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 49/159 (30%), Positives = 75/159 (47%)
 Frame = +3

Query: 54  LDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQI 233
           ++ GV  D      +L+ C  + S+  G  +HR                    Y+ CG I
Sbjct: 185 VEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDI 244

Query: 234 EKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVL 413
            KA +VFD+MP R+      WNS+L+ YV  G+   AM ++ QM  EG EPD  +   VL
Sbjct: 245 VKARKVFDKMPHRDP---VSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVL 301

Query: 414 KACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
               G+ S+  G  +H  ++  G   +  + N+L+ MYS
Sbjct: 302 ---TGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYS 337



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/122 (31%), Positives = 63/122 (51%)
 Frame = +3

Query: 87  SSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVFDQMP 266
           S S+    T + SL  G ++H  +                  Y+  G++EKA  VF+ MP
Sbjct: 294 SVSISTVLTGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMP 353

Query: 267 QRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIGSIRH 446
           +R+      WNS++S + +     +A+A + QME  GV+PD+ TF  +L ACA +G ++ 
Sbjct: 354 ERD---VVSWNSIISAHCK---RREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKD 407

Query: 447 GE 452
           GE
Sbjct: 408 GE 409


>gb|ACU21163.1| unknown [Glycine max]
          Length = 481

 Score =  199 bits (506), Expect = 3e-49
 Identities = 93/177 (52%), Positives = 129/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ EAL++++ DLE ++++G+  DP + +SLLETC + +++  G R+HRLIP        
Sbjct: 66  TKLEALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNV 125

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+CG ++ AH +FDQM +R+ S AFPWNSL+SGY ++G +++A+ALY QM
Sbjct: 126 GISSKLLRLYASCGYLDDAHDLFDQMAKRDTS-AFPWNSLISGYAQVGHYDEAIALYFQM 184

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
            EEGVE D +TFPRVLK CAGIGS++ GE VHRH +R+GF  D F+LNALVDMYSKC
Sbjct: 185 VEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKC 241



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 49/159 (30%), Positives = 75/159 (47%)
 Frame = +3

Query: 54  LDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQI 233
           ++ GV  D      +L+ C  + S+  G  +HR                    Y+ CG I
Sbjct: 185 VEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDI 244

Query: 234 EKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVL 413
            KA +VFD+MP R+      WNS+L+ YV  G+   AM ++ QM  EG EPD  +   VL
Sbjct: 245 VKARKVFDKMPHRDP---VSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVL 301

Query: 414 KACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
               G+ S+  G  +H  ++  G   +  + N+L+ MYS
Sbjct: 302 ---TGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYS 337



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/122 (31%), Positives = 63/122 (51%)
 Frame = +3

Query: 87  SSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVFDQMP 266
           S S+    T + SL  G ++H  +                  Y+  G++EKA  VF+ MP
Sbjct: 294 SVSISTVLTGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMP 353

Query: 267 QRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIGSIRH 446
           +R+      WNS++S + +     +A+A + QME  GV+PD+ TF  +L ACA +G ++ 
Sbjct: 354 ERD---VVSWNSIISAHCK---RREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKD 407

Query: 447 GE 452
           GE
Sbjct: 408 GE 409


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
           ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  199 bits (505), Expect = 4e-49
 Identities = 97/178 (54%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPF-DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXX 182
           T+ EALD ++TDLE +  +G+   +P + +SLLETC  +R++  G R+H LIP       
Sbjct: 298 TQLEALDSVITDLEASAQKGISITEPEIFASLLETCYNLRAIDHGVRVHHLIPPYLLRNN 357

Query: 183 XXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQ 362
                     YA+CG  E AH VFD+M +R  S  F WNSL+SGY ELG +EDAMALY Q
Sbjct: 358 VGISSKLVRLYASCGYAEVAHEVFDRMSKRESS-PFAWNSLISGYAELGQYEDAMALYFQ 416

Query: 363 MEEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           M E+GV+PD +TFPRVLKAC GIGS++ GEA+HR LV++GFG+D  VLNALVDMY+KC
Sbjct: 417 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAKC 474



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 50/157 (31%), Positives = 78/157 (49%)
 Frame = +3

Query: 63  GVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKA 242
           GV  D      +L+ C  + S+  G  +HR +                  YA CG I KA
Sbjct: 421 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKA 480

Query: 243 HRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKAC 422
             VFD +P  NK +   WNS+L+GY+  G+  +A+ ++  M + G++PD+     VL   
Sbjct: 481 RNVFDMIP--NKDYV-SWNSMLTGYLHHGLLHEALDIFRLMVQNGIDPDKVAISSVL--- 534

Query: 423 AGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
           A + S +HG  +H  ++R G   +  V NAL+ +YSK
Sbjct: 535 ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 571


>ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Citrus sinensis]
          Length = 526

 Score =  198 bits (504), Expect = 6e-49
 Identities = 99/177 (55%), Positives = 123/177 (69%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +ALD ++ DLE ++  G+       +SLLETC Q++++  G +LHRLIP        
Sbjct: 67  TKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNK 126

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA  G I++AH+VFDQM  R  + AFPWNSL+SGY ELG +EDA+ALY QM
Sbjct: 127 GISSKLLRLYATFGLIDEAHQVFDQMSNRT-AFAFPWNSLISGYAELGEYEDAIALYFQM 185

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD++TFPRVLKACAG+G IR GE VH   VR GFG D FVLNALVDMY+KC
Sbjct: 186 EEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKC 242



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/159 (26%), Positives = 70/159 (44%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  +  +  G ++H                     YA CG I 
Sbjct: 187 EEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIV 246

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA  VFD++  ++      +NS+L+GY+  G+  +A  ++  M   G +PD      +L 
Sbjct: 247 KARTVFDRIGNKD---LISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL- 302

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
             A    +R G  VH  ++R G   D  + N+L+ +YSK
Sbjct: 303 --ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSK 339



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/133 (29%), Positives = 67/133 (50%)
 Frame = +3

Query: 75  DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVF 254
           DP   SS+L   + +R    GA++H  +                  Y+  G++++A  +F
Sbjct: 294 DPVAISSILANASLLRI---GAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLF 350

Query: 255 DQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIG 434
           D MPQ++      WNS++  + +     +A+  + QME +GV PD  TF  +L ACA +G
Sbjct: 351 DHMPQKD---VVSWNSIIHAHSK---DHEALIYFEQMERDGVLPDHLTFVSLLSACAHLG 404

Query: 435 SIRHGEAVHRHLV 473
           S++ GE +   +V
Sbjct: 405 SVKVGERLFSVMV 417


>ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citrus clementina]
           gi|557523589|gb|ESR34956.1| hypothetical protein
           CICLE_v10004726mg [Citrus clementina]
          Length = 526

 Score =  198 bits (504), Expect = 6e-49
 Identities = 99/177 (55%), Positives = 123/177 (69%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +ALD ++ DLE ++  G+       +SLLETC Q++++  G +LHRLIP        
Sbjct: 67  TKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNK 126

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA  G I++AH+VFDQM  R  + AFPWNSL+SGY ELG +EDA+ALY QM
Sbjct: 127 GISSKLLRLYATFGLIDEAHQVFDQMSNRT-AFAFPWNSLISGYAELGEYEDAIALYFQM 185

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           EEEGVEPD++TFPRVLKACAG+G IR GE VH   VR GFG D FVLNALVDMY+KC
Sbjct: 186 EEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKC 242



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/159 (26%), Positives = 70/159 (44%)
 Frame = +3

Query: 57  DRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIE 236
           + GV  D      +L+ C  +  +  G ++H                     YA CG I 
Sbjct: 187 EEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIV 246

Query: 237 KAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLK 416
           KA  VFD++  ++      +NS+L+GY+  G+  +A  ++  M   G +PD      +L 
Sbjct: 247 KARTVFDRIGNKD---LISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL- 302

Query: 417 ACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
             A    +R G  VH  ++R G   D  + N+L+ +YSK
Sbjct: 303 --ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSK 339



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/133 (28%), Positives = 66/133 (49%)
 Frame = +3

Query: 75  DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVF 254
           DP   SS+L   + +R    GA++H  +                  Y+  G++++A  +F
Sbjct: 294 DPVAISSILANASLLRI---GAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLF 350

Query: 255 DQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIG 434
           D MPQ++      WNS++  + +     + +  + QME +GV PD  TF  +L ACA +G
Sbjct: 351 DHMPQKD---VVSWNSIIHAHSK---DHEVLIYFEQMERDGVLPDHITFVSLLSACAHLG 404

Query: 435 SIRHGEAVHRHLV 473
           S++ GE +   +V
Sbjct: 405 SVKDGERLFSVMV 417


>ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Solanum lycopersicum]
          Length = 539

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVP-FDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXX 182
           T+ +AL+ ++ +LE+ +  G   +DP + +SLLETC Q++++  G R+H LIP       
Sbjct: 72  TKLQALETVIRNLEMTVKNGTDIYDPQIFASLLETCFQLQAIDHGVRVHELIPEKLLRKN 131

Query: 183 XXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQ 362
                     YA  GQ +KAH++FD+MP+RN S AFPWNS++SGY E G+ EDA+A+Y Q
Sbjct: 132 VGISSKLIRLYACSGQTQKAHQLFDKMPKRNTS-AFPWNSIISGYAEKGLFEDALAMYFQ 190

Query: 363 MEEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           M EEGVEPD YTFPR LKAC G+G I  GE VHRH++R GFG + F+LNALVDMYSKC
Sbjct: 191 MVEEGVEPDCYTFPRALKACGGVGLIHVGEEVHRHVIRRGFGSNGFILNALVDMYSKC 248



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/159 (25%), Positives = 71/159 (44%)
 Frame = +3

Query: 54  LDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQI 233
           ++ GV  D       L+ C  +  +  G  +HR +                  Y+ CG I
Sbjct: 192 VEEGVEPDCYTFPRALKACGGVGLIHVGEEVHRHVIRRGFGSNGFILNALVDMYSKCGDI 251

Query: 234 EKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVL 413
            KA ++FDQ+  ++      WNS+L GY+   +   A+ L+  M  +G+EPD  +   +L
Sbjct: 252 VKAQKLFDQIGTKD---LVSWNSMLIGYMRHELVTKALNLFRLMIRDGIEPDSVSISALL 308

Query: 414 KACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYS 530
            A         G+ +H  + R G   +  ++N+LVD Y+
Sbjct: 309 VARIPFSI---GKQIHGWVHRRGTNQELSIVNSLVDFYA 344


>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/177 (53%), Positives = 128/177 (72%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXX 185
           T+ +ALD ++ DLE ++ +G+  D  + SSLLETC ++ S+  G R+HRLIP        
Sbjct: 69  TKLQALDDVIKDLESSIGKGIKIDTQIISSLLETCYRLNSIDHGMRIHRLIPTSILRKNT 128

Query: 186 XXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQM 365
                    YA+CG +++AH++FD+M  R++S AF WNSL++GY ELG++EDA+ALY QM
Sbjct: 129 GVSSKLLRLYASCGYMDEAHQMFDEMSNRDES-AFAWNSLIAGYSELGLYEDAIALYFQM 187

Query: 366 EEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           +EE VEPDE+TFPRVLKAC G+G I+ GEAVHR L+R GF +D F  NALVDMY+KC
Sbjct: 188 DEEYVEPDEFTFPRVLKACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKC 244



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/145 (27%), Positives = 69/145 (47%)
 Frame = +3

Query: 96  LLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKAHRVFDQMPQRN 275
           +L+ C  +  +  G  +HR +                  YA CG I KA  +F++M  ++
Sbjct: 202 VLKACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKD 261

Query: 276 KSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKACAGIGSIRHGEA 455
              +  WNS+L+GYV  G+  +A     +M ++G+E D      +L   A + S + G  
Sbjct: 262 ---SVSWNSMLTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLL---ANVSSFKLGVQ 315

Query: 456 VHRHLVRSGFGHDAFVLNALVDMYS 530
           +H  ++R G   D  + N+L+ MYS
Sbjct: 316 IHGWILRRGMQWDLSIANSLIVMYS 340


>ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat protein OTP70 [Arabidopsis
           thaliana]
          Length = 527

 Score =  197 bits (500), Expect = 2e-48
 Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   TRTEALDRLLTDLEVALDRGVPF-DPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXX 182
           T+ EALD ++TDLE +  +G+   +P + +SLLETC  +R++  G R+H LIP       
Sbjct: 67  TQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 126

Query: 183 XXXXXXXXXFYAACGQIEKAHRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQ 362
                     YA+CG  E AH VFD+M +R+ S  F WNSL+SGY ELG +EDAMALY Q
Sbjct: 127 LGISSKLVRLYASCGYAEVAHEVFDRMSKRDSS-PFAWNSLISGYAELGQYEDAMALYFQ 185

Query: 363 MEEEGVEPDEYTFPRVLKACAGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSKC 536
           M E+GV+PD +TFPRVLKAC GIGS++ GEA+HR LV+ GFG+D +VLNALV MY+KC
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 49/157 (31%), Positives = 77/157 (49%)
 Frame = +3

Query: 63  GVPFDPSLSSSLLETCTQMRSLSQGARLHRLIPXXXXXXXXXXXXXXXXFYAACGQIEKA 242
           GV  D      +L+ C  + S+  G  +HR +                  YA CG I KA
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249

Query: 243 HRVFDQMPQRNKSHAFPWNSLLSGYVELGIHEDAMALYHQMEEEGVEPDEYTFPRVLKAC 422
             VFD +P ++      WNS+L+GY+  G+  +A+ ++  M + G+EPD+     VL   
Sbjct: 250 RNVFDMIPHKDY---VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL--- 303

Query: 423 AGIGSIRHGEAVHRHLVRSGFGHDAFVLNALVDMYSK 533
           A + S +HG  +H  ++R G   +  V NAL+ +YSK
Sbjct: 304 ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340