BLASTX nr result

ID: Zingiber25_contig00036959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036959
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006662298.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
gb|EMT26433.1| hypothetical protein F775_16328 [Aegilops tauschii]     55   8e-06
ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [S...    55   8e-06

>ref|XP_006662298.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Oryza brachyantha]
          Length = 544

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = -3

Query: 536 HCKARKLDDADMLLKRAVNNGIVPNALTWDIMLNNFISESILTVPEQ 396
           HCKAR LDDA MLL RAV  GI PN  TW IM+ NF  +S+  + +Q
Sbjct: 494 HCKARLLDDAAMLLNRAVGGGIAPNERTWSIMVQNFARKSLSILADQ 540


>ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -3

Query: 536 HCKARKLDDADMLLKRAVNNGIVPNALTWDIMLNNFISES 417
           HCKAR L DA MLL RAV +GI PN  TW IM+ NF+ +S
Sbjct: 633 HCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gb|EMT26433.1| hypothetical protein F775_16328 [Aegilops tauschii]
          Length = 776

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -3

Query: 536 HCKARKLDDADMLLKRAVNNGIVPNALTWDIMLNNFISESI 414
           HCKAR LDDA+MLL R+V  GI PN  TW IM+ NF+ + +
Sbjct: 726 HCKARLLDDANMLLNRSVTVGITPNERTWGIMVQNFVRQPL 766


>ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
           gi|241922813|gb|EER95957.1| hypothetical protein
           SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = -3

Query: 536 HCKARKLDDADMLLKRAVNNGIVPNALTWDIMLNNFISESI 414
           HCK R LDDA MLL +AV+ GIVPN  TW +M+ NF+ + +
Sbjct: 641 HCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQPV 681


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