BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036956
         (483 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   214   1e-53
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              209   3e-52
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi...   209   4e-52
ref|XP_002301860.2| pentatricopeptide repeat-containing family p...   159   3e-37
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   159   5e-37
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   159   5e-37
ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Caps...   158   6e-37
ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citr...   158   8e-37
ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containi...   158   8e-37
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   158   8e-37
gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily pr...   157   1e-36
sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c...   157   2e-36
ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thali...   157   2e-36
dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]           157   2e-36
ref|XP_006586001.1| PREDICTED: putative pentatricopeptide repeat...   156   2e-36
ref|XP_006586000.1| PREDICTED: putative pentatricopeptide repeat...   156   2e-36
ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat...   156   2e-36
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   156   2e-36
ref|XP_002532374.1| basic helix-loop-helix-containing protein, p...   156   2e-36
ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [S...   156   3e-36

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  214 bits (545), Expect = 1e-53
 Identities = 103/157 (65%), Positives = 123/157 (78%)
 Frame = -2

Query: 473 MGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHM 294
           MG+ +++VTWNT+IS Y    EFG AI+MFQ MQ ENVKPTE+TM SLLSACAHLGAL M
Sbjct: 164 MGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDM 223

Query: 293 GRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGT 114
           G WIH YI+  RLKID+VLGNAL+ MY KCG +E A+ VF G+  +NIFCWNS+I GLG 
Sbjct: 224 GEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGM 283

Query: 113 NGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           NG G++AI  F+ M + E IKPDGVTFV +LS CSHS
Sbjct: 284 NGRGEEAIAAFIVMEK-EGIKPDGVTFVGILSGCSHS 319



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 54/102 (52%)
 Frame = -2

Query: 377 MQMENVKPTEITMASLLSACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGD 198
           M   +V P++ + + +L +CA  G   +G   H  I     + D++L   L+  Y K GD
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 197 VETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQQAIETFLEM 72
           ++ A  VF GMP R++   N++I+ L  +GY ++A   F  M
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM 102


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  209 bits (532), Expect = 3e-52
 Identities = 101/152 (66%), Positives = 119/152 (78%)
 Frame = -2

Query: 458 DAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIH 279
           ++VTWNT+IS Y    EFG AI+MFQ MQ ENVKPTE+TM SLLSACAHLGAL MG WIH
Sbjct: 97  NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 156

Query: 278 AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQ 99
            YI+  RLKID+VLGNAL+ MY KCG +E A+ VF G+  +NIFCWNS+I GLG NG G+
Sbjct: 157 GYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGE 216

Query: 98  QAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           +AI  F+ M + E IKPDGVTFV +LS CSHS
Sbjct: 217 EAIAAFIVMEK-EGIKPDGVTFVGILSGCSHS 247


>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Solanum tuberosum]
          Length = 536

 Score =  209 bits (531), Expect = 4e-52
 Identities = 100/160 (62%), Positives = 122/160 (76%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F +M  +K+ VTWNT+I+GY    EF  AI +FQ M  E VKPTE+TM SLLSACAHLGA
Sbjct: 123 FVEMEFMKNVVTWNTMIAGYVQCGEFVRAINLFQRMLREEVKPTEVTMVSLLSACAHLGA 182

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L MG WIH YI+  ++ ID +LGNAL+ MYFKCG+VE A+ VF G+  RNIFCWNSVI G
Sbjct: 183 LDMGEWIHGYIRTKKIMIDFILGNALIDMYFKCGNVEAAIQVFHGLHDRNIFCWNSVIIG 242

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           LG +GYG++A++ F+ M R E IKPDGVTFV LL +CSHS
Sbjct: 243 LGMHGYGKEAVDAFIAMER-EGIKPDGVTFVGLLCSCSHS 281


>ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345843|gb|EEE81133.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 933

 Score =  159 bits (403), Expect = 3e-37
 Identities = 75/160 (46%), Positives = 114/160 (71%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F+QM A +D ++W T+I+ YS ++ F  A+ +F  M    + P E+TMA+++SACAHLGA
Sbjct: 200 FNQMPA-RDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGA 258

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G+ IH YI  H   +D+ +G+AL+ MY KCG ++ +L +F  +  +N+FCWNSVI G
Sbjct: 259 LDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEG 318

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  +GY ++A+  F +M R E+IKP+GVTFV +LSAC+H+
Sbjct: 319 LAVHGYAEEALAMFDKMER-EKIKPNGVTFVSVLSACNHA 357



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/115 (26%), Positives = 57/115 (49%)
 Frame = -2

Query: 464 LKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRW 285
           + +   +N +I G+    +   A+ ++  M   NV PT  T  SL+ AC  +  L     
Sbjct: 42  IPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEA 101

Query: 284 IHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGL 120
           +H ++  +     + +  +LV  Y   G +E ++ VF  MP R++F W ++++GL
Sbjct: 102 VHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGL 156



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
           K+   WN++I G + H     A+ MF  M+ E +KP  +T  S+LSAC H G +  GR  
Sbjct: 307 KNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKR 366

Query: 281 HAYI-QNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAG 123
            A + ++H +   +     +V +  K G +E AL + R M +  N   W ++++G
Sbjct: 367 FASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  159 bits (401), Expect = 5e-37
 Identities = 77/160 (48%), Positives = 108/160 (67%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   KD V+W  +I GY     F  A+ +F+ MQ  NVKP E TM S+L+ACAHLGA
Sbjct: 329 FDKMPE-KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G WI  YI  +++K DL + NAL+ MYFKCGDV+ A S+FR M  R+ F W ++I G
Sbjct: 388 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  NG+G++A++ F  M +   I PD +T++ +LSAC+H+
Sbjct: 448 LAVNGHGEKALDMFSNMLKAS-ILPDEITYIGVLSACTHT 486



 Score =  104 bits (259), Expect = 1e-20
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 31/182 (17%)
 Frame = -2

Query: 458 DAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIH 279
           D +TWN +IS Y+   +F  +  +F +M+ + V PT +T+  +LSAC+ L  L  G+ +H
Sbjct: 204 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 263

Query: 278 AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG---LG--- 117
           +Y++N +++ +LVL NA++ MY  CG++++AL +FR M  R+I  W ++++G   LG   
Sbjct: 264 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 323

Query: 116 --------------------TNGY-----GQQAIETFLEMNRLERIKPDGVTFVWLLSAC 12
                                +GY      ++A+E F  M +   +KPD  T V +L+AC
Sbjct: 324 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM-QATNVKPDEFTMVSVLTAC 382

Query: 11  SH 6
           +H
Sbjct: 383 AH 384



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/146 (32%), Positives = 74/146 (50%)
 Frame = -2

Query: 446 WNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIHAYIQ 267
           WNT+I GYS      + ++++  M    VKP   T   L        AL  GR +H ++ 
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166

Query: 266 NHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQQAIE 87
            H L+ ++ +  ALV MY  CG ++TA  VF   P  ++  WN +I+     G  +++  
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226

Query: 86  TFLEMNRLERIKPDGVTFVWLLSACS 9
            FL M   +++ P  VT V +LSACS
Sbjct: 227 LFLVMED-KQVLPTTVTLVLVLSACS 251



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGR-W 285
           +D  TW  +I G + +     A+ MF  M   ++ P EIT   +LSAC H G +  GR +
Sbjct: 436 RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKY 495

Query: 284 IHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
                  H ++ ++     LV +  + G ++ A  V   MPI+ N   W +++AG     
Sbjct: 496 FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRV-- 553

Query: 107 YGQQAIETFLEMNRLERIKPDGVTFVWL 24
           Y +  +   +    LE    +G  +V L
Sbjct: 554 YRESDMAEMVVKQILELEPDNGAVYVLL 581


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  159 bits (401), Expect = 5e-37
 Identities = 77/160 (48%), Positives = 108/160 (67%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   KD V+W  +I GY     F  A+ +F+ MQ  NVKP E TM S+L+ACAHLGA
Sbjct: 308 FDKMPE-KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G WI  YI  +++K DL + NAL+ MYFKCGDV+ A S+FR M  R+ F W ++I G
Sbjct: 367 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 426

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  NG+G++A++ F  M +   I PD +T++ +LSAC+H+
Sbjct: 427 LAVNGHGEKALDMFSNMLKAS-ILPDEITYIGVLSACTHT 465



 Score =  104 bits (259), Expect = 1e-20
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 31/182 (17%)
 Frame = -2

Query: 458 DAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIH 279
           D +TWN +IS Y+   +F  +  +F +M+ + V PT +T+  +LSAC+ L  L  G+ +H
Sbjct: 183 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 242

Query: 278 AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG---LG--- 117
           +Y++N +++ +LVL NA++ MY  CG++++AL +FR M  R+I  W ++++G   LG   
Sbjct: 243 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 302

Query: 116 --------------------TNGY-----GQQAIETFLEMNRLERIKPDGVTFVWLLSAC 12
                                +GY      ++A+E F  M +   +KPD  T V +L+AC
Sbjct: 303 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM-QATNVKPDEFTMVSVLTAC 361

Query: 11  SH 6
           +H
Sbjct: 362 AH 363



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/146 (32%), Positives = 74/146 (50%)
 Frame = -2

Query: 446 WNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIHAYIQ 267
           WNT+I GYS      + ++++  M    VKP   T   L        AL  GR +H ++ 
Sbjct: 86  WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145

Query: 266 NHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQQAIE 87
            H L+ ++ +  ALV MY  CG ++TA  VF   P  ++  WN +I+     G  +++  
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205

Query: 86  TFLEMNRLERIKPDGVTFVWLLSACS 9
            FL M   +++ P  VT V +LSACS
Sbjct: 206 LFLVMED-KQVLPTTVTLVLVLSACS 230



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGR-W 285
           +D  TW  +I G + +     A+ MF  M   ++ P EIT   +LSAC H G +  GR +
Sbjct: 415 RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKY 474

Query: 284 IHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
                  H ++ ++     LV +  + G ++ A  V   MPI+ N   W +++AG     
Sbjct: 475 FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRV-- 532

Query: 107 YGQQAIETFLEMNRLERIKPDGVTFVWL 24
           Y +  +   +    LE    +G  +V L
Sbjct: 533 YRESDMAEMVVKQILELEPDNGAVYVLL 560


>ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Capsella rubella]
            gi|482574855|gb|EOA39042.1| hypothetical protein
            CARUB_v10011638mg [Capsella rubella]
          Length = 1308

 Score =  158 bits (400), Expect = 6e-37
 Identities = 71/160 (44%), Positives = 114/160 (71%)
 Frame = -2

Query: 482  FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
            F+QM  +KD ++W T+I+GYSH++ +  A+ +F  M  E + P E+TM++++SACAHLG 
Sbjct: 973  FNQM-PVKDTISWTTMINGYSHNKRYSEAVAVFYRMTEEGIIPDEVTMSTVVSACAHLGV 1031

Query: 302  LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
            L +G+ +H Y   +   +D+ +G+ALV MY KCG +E AL +F  +P +N+FCWNS+I G
Sbjct: 1032 LEIGKEVHKYTTQNGFVLDVYIGSALVDMYSKCGSLERALLIFFNLPKKNLFCWNSIIEG 1091

Query: 122  LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
            L  +G  Q+A++ F +M + E +KP+ VTFV +L+AC+H+
Sbjct: 1092 LAAHGCAQEALKMFAKM-KSESVKPNTVTFVSVLTACTHA 1130



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
 Frame = -2

Query: 461  KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
            K+   WN++I G + H     A+ MF  M+ E+VKP  +T  S+L+AC H G +  GR I
Sbjct: 1080 KNLFCWNSIIEGLAAHGCAQEALKMFAKMKSESVKPNTVTFVSVLTACTHAGLVEEGRRI 1139

Query: 281  H-AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
            + + I ++ +  ++     +V +  K G +  AL +   M    N   W +++ G   + 
Sbjct: 1140 YDSMIDDYSIVFNVEHYGCMVHLLSKAGLIYEALEIIGNMEFEPNAVIWGALLDGCRIHK 1199

Query: 107  YGQQAIETFLEMNRLERIKPDGVTFVWLL 21
              + A   F   N+L  ++P    + +LL
Sbjct: 1200 NLEIAEIAF---NKLMVLEPTNSGYYFLL 1225



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/159 (27%), Positives = 67/159 (42%)
 Frame = -2

Query: 482  FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
            FD+M   +D +TW T++S Y             Q+M ME+                    
Sbjct: 911  FDEMPE-RDDITWTTMVSAYR------------QVMDMESASS----------------- 940

Query: 302  LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
                      + N   K ++   N L+  Y K G++E A S+F  MP+++   W ++I G
Sbjct: 941  ----------LANQMPKKNVATSNCLIDGYTKLGNLEIAESLFNQMPVKDTISWTTMING 990

Query: 122  LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSH 6
               N    +A+  F  M   E I PD VT   ++SAC+H
Sbjct: 991  YSHNKRYSEAVAVFYRMTE-EGIIPDEVTMSTVVSACAH 1028


>ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citrus clementina]
           gi|557542184|gb|ESR53162.1| hypothetical protein
           CICLE_v10024603mg [Citrus clementina]
          Length = 695

 Score =  158 bits (399), Expect = 8e-37
 Identities = 76/159 (47%), Positives = 110/159 (69%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F+QM  +KD V W+ +ISGYS  R    A+ +F  MQM NV P E+TM S+LS CA LGA
Sbjct: 280 FEQMN-IKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGA 338

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L  G+W+H Y++  R+++ + LG AL+  Y KCG +E A+ VF+ MP++N+F W  +I  
Sbjct: 339 LETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQC 398

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSH 6
           L +NG G++A+ET+  M R + I+P+ VTF+ +LSACSH
Sbjct: 399 LASNGQGERALETYYIM-REKNIEPNDVTFIAVLSACSH 436



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 50/158 (31%), Positives = 89/158 (56%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   +D  +WN++ SGY     +   + +F  M+   VK  E+T+ ++L AC  L  
Sbjct: 179 FDRMSN-RDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLAD 237

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           + +G WI  Y++   L  ++ L  A+V MY KCG V+ A  +F  M I+++  W+++I+G
Sbjct: 238 IELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISG 297

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACS 9
                  ++A+  F +M ++  + P+ VT V +LS C+
Sbjct: 298 YSQARRCKEALGVFHDM-QMANVVPNEVTMVSVLSCCA 334



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/149 (28%), Positives = 76/149 (51%)
 Frame = -2

Query: 458 DAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIH 279
           D+  +N +I  ++  +    A+ +++ M   +++P   T A  L AC+ + AL  G  IH
Sbjct: 85  DSSAYNIMIRAFTLKQSPQEAVMLYKTMLENSLEPDRFTFACTLKACSRIRALEEGEQIH 144

Query: 278 AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQ 99
           A I         ++ N L+ +Y  CG ++ A  +F  M  R++F WNS+ +G       +
Sbjct: 145 AQILKSGFGCRQLVTNTLIHLYAICGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204

Query: 98  QAIETFLEMNRLERIKPDGVTFVWLLSAC 12
           + ++ F EM  L  +K D VT + +L AC
Sbjct: 205 EIVDLFNEMRDL-GVKFDEVTLINVLMAC 232


>ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Setaria italica]
          Length = 478

 Score =  158 bits (399), Expect = 8e-37
 Identities = 85/176 (48%), Positives = 113/176 (64%), Gaps = 16/176 (9%)
 Frame = -2

Query: 482 FDQMGA-LKDAVTWNTLISGYSHHREFGMAITMF----------QLMQMENVKPTEITMA 336
           FD+MG+ L D VTWNT+++GY H  +   AI +F          Q  +   +KPT +TMA
Sbjct: 157 FDRMGSSLPDVVTWNTVMAGYLHRGDPATAIAIFHRLMHVYQQQQRQEEHKLKPTTVTMA 216

Query: 335 SLLSACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR 156
           + ++AC  +G   +GR IH  I++   + D VL NAL+ MYFKCG V+ AL VFR MP R
Sbjct: 217 TAVTACTQVGDFALGRRIHLQIRHQGTRTDAVLSNALMDMYFKCGSVDGALDVFRTMPCR 276

Query: 155 -NIFCWNSVIAGLGTNGYGQQAIETFLEM----NRLERIKPDGVTFVWLLSACSHS 3
            N+FCWN+VIAGLG NG G+ A+  F +M       + +KPDGVTFV +LSACSHS
Sbjct: 277 PNLFCWNTVIAGLGMNGRGEDAVAAFHDMVEGRPNGDNVKPDGVTFVAVLSACSHS 332


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  158 bits (399), Expect = 8e-37
 Identities = 76/160 (47%), Positives = 106/160 (66%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   +D V+W  +I GY     F   +++F+ MQ  N+KP E TM S+L+ACAHLGA
Sbjct: 309 FDKMPE-RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G WI AYI  + +KID  +GNAL+ MYF CG+VE A+ +F  MP R+   W +VI G
Sbjct: 368 LELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  NGYG++A++ F +M +   I PD VT + +L AC+HS
Sbjct: 428 LAINGYGEEALDMFSQMLKAS-ITPDEVTCIGVLCACTHS 466



 Score =  112 bits (281), Expect = 4e-23
 Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 30/181 (16%)
 Frame = -2

Query: 458 DAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIH 279
           D VTWN +ISGY+  ++F  ++ +F  M+   V P+ IT+ S+LSAC+ L  L++G+ +H
Sbjct: 184 DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243

Query: 278 AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG---LGTNG 108
            Y+++ +++   VL NAL+ MY  CGD++TAL +F  M  R++  W +++ G   LG  G
Sbjct: 244 RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVG 303

Query: 107 YGQQ---------------AIETFLEMNRLE------------RIKPDGVTFVWLLSACS 9
             +                 I+ +L++NR +             IKPD  T V +L+AC+
Sbjct: 304 LARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACA 363

Query: 8   H 6
           H
Sbjct: 364 H 364



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 46/146 (31%), Positives = 72/146 (49%)
 Frame = -2

Query: 446 WNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIHAYIQ 267
           WN +I GYS       A++M+  M    V P E T   LL       A+  GR +H +I 
Sbjct: 87  WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIV 146

Query: 266 NHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQQAIE 87
                 ++ + NAL+ +Y   G+V  A  VF      ++  WN +I+G   +    ++++
Sbjct: 147 KLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMK 206

Query: 86  TFLEMNRLERIKPDGVTFVWLLSACS 9
            F EM R+ R+ P  +T V +LSACS
Sbjct: 207 LFDEMERM-RVLPSSITLVSVLSACS 231


>gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao]
          Length = 600

 Score =  157 bits (397), Expect = 1e-36
 Identities = 75/160 (46%), Positives = 113/160 (70%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F+QM  +KD ++W ++I+ YS +++F  A+ +F+ M+   V P E+TMAS++SACAHLGA
Sbjct: 266 FNQM-PVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVSPDEVTMASVISACAHLGA 324

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L+ G+ IH Y+  +   +D+ +G+ALV MY KCG +E +L  F  +  +N+FCWNSVI G
Sbjct: 325 LNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEG 384

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  +GY Q+A+  F  M R   +KP+GVTFV +LSAC+H+
Sbjct: 385 LAVHGYAQEALAMFDSMER-HHVKPNGVTFVSVLSACTHA 423



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRW- 285
           K+   WN++I G + H     A+ MF  M+  +VKP  +T  S+LSAC H G + +GR  
Sbjct: 373 KNLFCWNSVIEGLAVHGYAQEALAMFDSMERHHVKPNGVTFVSVLSACTHAGLVEVGRQR 432

Query: 284 IHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAG 123
             +  +++ +  ++     +V +  K G +E AL + R M +  N   W +++ G
Sbjct: 433 FLSMTRDYSIPPEVEHYGCMVDLLSKAGLLEDALFLIRSMKLEPNPVIWGALLGG 487



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/108 (28%), Positives = 50/108 (46%)
 Frame = -2

Query: 446 WNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWIHAYIQ 267
           +N LI G  H      A+   + M    V P+  T +SL+ AC  +  L  G  +H  + 
Sbjct: 114 YNALIKGLVHCHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVW 173

Query: 266 NHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
            H  +  + +  ALV  Y   G    +  VF  MP R++F W ++++G
Sbjct: 174 KHGFESHVFVQTALVDFYANVGKFAESKRVFDEMPDRDVFAWTTMVSG 221



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 45/76 (59%)
 Frame = -2

Query: 233 NALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQQAIETFLEMNRLERI 54
           NA++  Y + GDVE+A   F  MP+++I  W S+I     N   ++A+  F EM R  ++
Sbjct: 247 NAMIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRR-NKV 305

Query: 53  KPDGVTFVWLLSACSH 6
            PD VT   ++SAC+H
Sbjct: 306 SPDEVTMASVISACAH 321


>sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
          Length = 577

 Score =  157 bits (396), Expect = 2e-36
 Identities = 71/160 (44%), Positives = 112/160 (70%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F+QM  +KD ++W T+I GYS ++ +  AI +F  M  E + P E+TM++++SACAHLG 
Sbjct: 244 FNQM-PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 302

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G+ +H Y   +   +D+ +G+ALV MY KCG +E AL VF  +P +N+FCWNS+I G
Sbjct: 303 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 362

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  +G+ Q+A++ F +M  +E +KP+ VTFV + +AC+H+
Sbjct: 363 LAAHGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHA 401



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
           K+   WN++I G + H     A+ MF  M+ME+VKP  +T  S+ +AC H G +  GR I
Sbjct: 351 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 410

Query: 281 H-AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
           + + I ++ +  ++     +V ++ K G +  AL +   M    N   W +++ G   + 
Sbjct: 411 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH- 469

Query: 107 YGQQAIETFLEMNRLERIKPDGVTFVWLL 21
             +  +   +  N+L  ++P    + +LL
Sbjct: 470 --KNLVIAEIAFNKLMVLEPMNSGYYFLL 496


>ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thaliana]
            gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity
            to an unknown protein T5J8.5 gi|4263522 from Arabidopsis
            thaliana BAC T5J8 gb|AC004044 and contains multiple PPR
            PF|01535 repeats. ESTs gb|AV565358, gb|AV558710,
            gb|AV524184 come from this gene [Arabidopsis thaliana]
            gi|332189826|gb|AEE27947.1| bHLH transcription factor
            LHL1 [Arabidopsis thaliana]
          Length = 1322

 Score =  157 bits (396), Expect = 2e-36
 Identities = 71/160 (44%), Positives = 112/160 (70%)
 Frame = -2

Query: 482  FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
            F+QM  +KD ++W T+I GYS ++ +  AI +F  M  E + P E+TM++++SACAHLG 
Sbjct: 989  FNQM-PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047

Query: 302  LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
            L +G+ +H Y   +   +D+ +G+ALV MY KCG +E AL VF  +P +N+FCWNS+I G
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107

Query: 122  LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
            L  +G+ Q+A++ F +M  +E +KP+ VTFV + +AC+H+
Sbjct: 1108 LAAHGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHA 1146



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
 Frame = -2

Query: 461  KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
            K+   WN++I G + H     A+ MF  M+ME+VKP  +T  S+ +AC H G +  GR I
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 1155

Query: 281  H-AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
            + + I ++ +  ++     +V ++ K G +  AL +   M    N   W +++ G   + 
Sbjct: 1156 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH- 1214

Query: 107  YGQQAIETFLEMNRLERIKPDGVTFVWLL 21
              +  +   +  N+L  ++P    + +LL
Sbjct: 1215 --KNLVIAEIAFNKLMVLEPMNSGYYFLL 1241


>dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
          Length = 577

 Score =  157 bits (396), Expect = 2e-36
 Identities = 71/160 (44%), Positives = 112/160 (70%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F+QM  +KD ++W T+I GYS ++ +  AI +F  M  E + P E+TM++++SACAHLG 
Sbjct: 244 FNQM-PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 302

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G+ +H Y   +   +D+ +G+ALV MY KCG +E AL VF  +P +N+FCWNS+I G
Sbjct: 303 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 362

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  +G+ Q+A++ F +M  +E +KP+ VTFV + +AC+H+
Sbjct: 363 LAAHGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHA 401



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
 Frame = -2

Query: 461 KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
           K+   WN++I G + H     A+ MF  M+ME+VKP  +T  S+ +AC H G +  GR I
Sbjct: 351 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 410

Query: 281 H-AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAGLGTNG 108
           + + I ++ +  ++     +V ++ K G +  AL +   M    N   W +++ G   + 
Sbjct: 411 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH- 469

Query: 107 YGQQAIETFLEMNRLERIKPDGVTFVWLL 21
             +  +   +  N+L  ++P    + +LL
Sbjct: 470 --KNLVIAEIAFNKLMVLEPMNSGYYFLL 496


>ref|XP_006586001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like isoform X3 [Glycine max]
          Length = 553

 Score =  156 bits (395), Expect = 2e-36
 Identities = 72/158 (45%), Positives = 110/158 (69%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   +D VTWN +I+GY+       A+ +F LMQME VK  E++M  +LSAC HL  
Sbjct: 201 FDEMPE-RDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQV 259

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L  GRW+HAY++ +++++ + LG ALV MY KCG+V+ A+ VF GM  RN++ W+S I G
Sbjct: 260 LDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGG 319

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACS 9
           L  NG+G+++++ F +M R E ++P+G+TF+ +L  CS
Sbjct: 320 LAMNGFGEESLDLFNDMKR-EGVQPNGITFISVLKGCS 356



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
 Frame = -2

Query: 365 NVKPTEITMASLLSACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYF-------- 210
           N+ P   T   L+  CA L A   G  +H  +  H  ++D  +   LV MY         
Sbjct: 107 NLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSC 166

Query: 209 -----------------------KCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQ 99
                                  KCGD++ A  +F  MP R+   WN++IAG    G  +
Sbjct: 167 HNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR 226

Query: 98  QAIETFLEMNRLERIKPDGVTFVWLLSACSH 6
           +A++ F  + ++E +K + V+ V +LSAC+H
Sbjct: 227 EALDVF-HLMQMEGVKLNEVSMVLVLSACTH 256


>ref|XP_006586000.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like isoform X2 [Glycine max]
          Length = 634

 Score =  156 bits (395), Expect = 2e-36
 Identities = 72/158 (45%), Positives = 110/158 (69%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   +D VTWN +I+GY+       A+ +F LMQME VK  E++M  +LSAC HL  
Sbjct: 201 FDEMPE-RDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQV 259

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L  GRW+HAY++ +++++ + LG ALV MY KCG+V+ A+ VF GM  RN++ W+S I G
Sbjct: 260 LDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGG 319

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACS 9
           L  NG+G+++++ F +M R E ++P+G+TF+ +L  CS
Sbjct: 320 LAMNGFGEESLDLFNDMKR-EGVQPNGITFISVLKGCS 356



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
 Frame = -2

Query: 365 NVKPTEITMASLLSACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYF-------- 210
           N+ P   T   L+  CA L A   G  +H  +  H  ++D  +   LV MY         
Sbjct: 107 NLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSC 166

Query: 209 -----------------------KCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQ 99
                                  KCGD++ A  +F  MP R+   WN++IAG    G  +
Sbjct: 167 HNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR 226

Query: 98  QAIETFLEMNRLERIKPDGVTFVWLLSACSH 6
           +A++ F  + ++E +K + V+ V +LSAC+H
Sbjct: 227 EALDVF-HLMQMEGVKLNEVSMVLVLSACTH 256


>ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like isoform X1 [Glycine max]
          Length = 616

 Score =  156 bits (395), Expect = 2e-36
 Identities = 72/158 (45%), Positives = 110/158 (69%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           FD+M   +D VTWN +I+GY+       A+ +F LMQME VK  E++M  +LSAC HL  
Sbjct: 201 FDEMPE-RDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQV 259

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L  GRW+HAY++ +++++ + LG ALV MY KCG+V+ A+ VF GM  RN++ W+S I G
Sbjct: 260 LDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGG 319

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACS 9
           L  NG+G+++++ F +M R E ++P+G+TF+ +L  CS
Sbjct: 320 LAMNGFGEESLDLFNDMKR-EGVQPNGITFISVLKGCS 356



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
 Frame = -2

Query: 365 NVKPTEITMASLLSACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYF-------- 210
           N+ P   T   L+  CA L A   G  +H  +  H  ++D  +   LV MY         
Sbjct: 107 NLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSC 166

Query: 209 -----------------------KCGDVETALSVFRGMPIRNIFCWNSVIAGLGTNGYGQ 99
                                  KCGD++ A  +F  MP R+   WN++IAG    G  +
Sbjct: 167 HNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR 226

Query: 98  QAIETFLEMNRLERIKPDGVTFVWLLSACSH 6
           +A++ F  + ++E +K + V+ V +LSAC+H
Sbjct: 227 EALDVF-HLMQMEGVKLNEVSMVLVLSACTH 256


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  156 bits (395), Expect = 2e-36
 Identities = 71/160 (44%), Positives = 113/160 (70%)
 Frame = -2

Query: 482  FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
            F+QM  +KD ++W T+I+GYS ++ +  AI +F  M  E + P E+TM++++SACAHLG 
Sbjct: 996  FNQM-PVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1054

Query: 302  LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
            L +G+ +H Y   +   +D+ +G+ALV MY KCG +E AL VF  +P +N+FCWNS+I G
Sbjct: 1055 LEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1114

Query: 122  LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
            L  +G+ Q+A++ F +M  +E +KP+ VTFV + +AC+H+
Sbjct: 1115 LAAHGFAQEALKMFAKM-EMESVKPNTVTFVSVFTACTHA 1153



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -2

Query: 461  KDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGALHMGRWI 282
            K+   WN++I G + H     A+ MF  M+ME+VKP  +T  S+ +AC H G +  GR I
Sbjct: 1103 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRI 1162

Query: 281  H-AYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIR-NIFCWNSVIAG 123
            + + I ++ +  ++     +V ++ K G +  AL +   M    N   W +++ G
Sbjct: 1163 YRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDG 1217


>ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527930|gb|EEF30017.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 310

 Score =  156 bits (395), Expect = 2e-36
 Identities = 70/160 (43%), Positives = 115/160 (71%)
 Frame = -2

Query: 482 FDQMGALKDAVTWNTLISGYSHHREFGMAITMFQLMQMENVKPTEITMASLLSACAHLGA 303
           F QM   +D ++W T+++ Y+ +++FG A+ +F  M    + P E+TMA+++SACAHLGA
Sbjct: 130 FSQMHE-RDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEVTMATVISACAHLGA 188

Query: 302 LHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMPIRNIFCWNSVIAG 123
           L +G+ IH Y+  +   +D+ +G++L+ MY KCG ++ +L VF  +  +N+FCWNSVI G
Sbjct: 189 LDLGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCGSLDRSLLVFFKLQEKNLFCWNSVIEG 248

Query: 122 LGTNGYGQQAIETFLEMNRLERIKPDGVTFVWLLSACSHS 3
           L  +GY ++A+E F +M R E+IKP+GVTF+ +L+AC+H+
Sbjct: 249 LAAHGYAKEALEMFRKMGR-EKIKPNGVTFISVLNACAHA 287


>ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [Sorghum bicolor]
           gi|241916278|gb|EER89422.1| hypothetical protein
           SORBIDRAFT_10g007350 [Sorghum bicolor]
          Length = 587

 Score =  156 bits (394), Expect = 3e-36
 Identities = 88/176 (50%), Positives = 115/176 (65%), Gaps = 16/176 (9%)
 Frame = -2

Query: 482 FDQMGA-LKDAVTWNTLISGYSHHREFGMAITMFQLMQM------ENVKPTEITMASLLS 324
           FD+MG+ L D +TWNT+++GY    +   AI MF L+        + ++PT  TMA++++
Sbjct: 161 FDRMGSSLPDVITWNTMMAGYLRGGDPASAIAMFHLLMRTQREGEQRLRPTNGTMATVVA 220

Query: 323 ACAHLGALHMGRWIHAYIQNHRLKIDLVLGNALVVMYFKCGDVETALSVFRGMP---IRN 153
           ACA +G L +GR IH  IQ   + ID VL NAL+ MYFK G V+ AL VFR MP     N
Sbjct: 221 ACAQVGNLALGRQIHHLIQQKGIWIDTVLSNALMDMYFKSGSVDCALDVFRAMPRPRSPN 280

Query: 152 IFCWNSVIAGLGTNGYGQQAIETFLEM----NRL--ERIKPDGVTFVWLLSACSHS 3
           +FCWN+VI+GLG NG+G+ AI  F +M     RL    +KPDGVTFV LLSACSHS
Sbjct: 281 LFCWNTVISGLGMNGHGEDAIAAFHDMVEGRGRLNGNSVKPDGVTFVALLSACSHS 336