BLASTX nr result
ID: Zingiber25_contig00036618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00036618
(812 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao] 236 9e-60
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao] 218 2e-54
dbj|BAA22288.1| polyprotein [Oryza australiensis] 213 5e-53
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 203 5e-50
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 203 5e-50
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part... 201 3e-49
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 200 6e-49
ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759... 198 2e-48
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 197 5e-48
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group] 194 3e-47
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 193 5e-47
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 193 7e-47
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 192 9e-47
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 192 9e-47
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-... 188 2e-45
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 187 4e-45
gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group] 176 9e-42
ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662... 176 1e-41
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap... 174 4e-41
ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Popu... 172 1e-40
>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 289
Score = 236 bits (601), Expect = 9e-60
Identities = 127/265 (47%), Positives = 167/265 (63%), Gaps = 11/265 (4%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
++L L SILD NKL G NFLD FRNL+IVLK EK +Y+ + +P DA + A+Q
Sbjct: 3 NNLLLRSILDANKLIGPNFLDSFRNLKIVLKQEKKSYIFDTSIPPVPTTDANVEDKEAHQ 62
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+H D + A+C+MLASM+ ELQKQ EHMD +++ HLRELFD++ R ER+E+SK LF K
Sbjct: 63 RHKDDDDQAACVMLASMTLELQKQDEHMDVQSMILHLRELFDKEGRTERYEISKELFRCK 122
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
M EGSS VLKM G IERL LG AM HELSI L+L SL +S+SQFV+N+ +N++E+T
Sbjct: 123 MAEGSSVKPHVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQFVLNFHMNRLEAT 182
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSSK-----------KGSXXXXXXXXXXXXXXXXX 87
+P+L+NML E S++K ++L SSK K
Sbjct: 183 LPKLLNMLDTAEKSIRKHKGSLLLISSSKAHTKQHKKKAQKEKKVKSQNEKALKPKGGVK 242
Query: 86 XXXXKGSCHHCGEMGHWKRNCKIYL 12
K C HCG++GHW+RNCK YL
Sbjct: 243 KDKEKDICDHCGKLGHWRRNCKEYL 267
>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 277
Score = 218 bits (555), Expect = 2e-54
Identities = 112/238 (47%), Positives = 152/238 (63%), Gaps = 11/238 (4%)
Frame = -1
Query: 683 KVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQHEHMDA 504
K EK +YV++ P+P DA+++ AYQ H D + A+C+MLASM+ ELQKQHEHMD
Sbjct: 21 KEEKKSYVIDTPIPPVPVADASAEDKEAYQCHKDDDDQAACMMLASMTLELQKQHEHMDV 80
Query: 503 YTIVYHLRELFDEQARIERFEVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLGFAMDH 324
+++ HLRELFD + RIER+E+SK LF KM EGSS VLKM G IERLR LG AMDH
Sbjct: 81 QSMILHLRELFDREGRIERYEISKELFRCKMAEGSSVRPHVLKMIGLIERLRQLGLAMDH 140
Query: 323 ELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINMLKIVELSVKKEPKVVMLFDSSK- 147
ELSI L+L SL +S+SQF++N+ +N++E+T+PEL+NML + S++K+ ++L SK
Sbjct: 141 ELSIDLVLQSLPDSFSQFMLNFHMNRLEATLPELLNMLDTAKRSIRKDKGSLLLLSFSKA 200
Query: 146 ----------KGSXXXXXXXXXXXXXXXXXXXXXKGSCHHCGEMGHWKRNCKIYLESL 3
KG CHHCG++GHW+RNCK YL ++
Sbjct: 201 HTKQQKKKAQKGKKVKSQNEKALKPKGGVKKDKETDICHHCGKLGHWRRNCKEYLATV 258
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 213 bits (543), Expect = 5e-53
Identities = 119/268 (44%), Positives = 158/268 (58%), Gaps = 11/268 (4%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KL G NF+DW+RNLRIVLK E+ YVLE P P L ++AT+ ++
Sbjct: 8 STFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRGFE 67
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
KH D+ SC+MLA+MSPELQKQ+E DA+T + LR +F+ QAR ERF SK LF +
Sbjct: 68 KHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFACR 127
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GYIE L LGF + EL+ +IL SL S+ F++NY +N ++ T
Sbjct: 128 LVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRT 187
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSSK-----KGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK VE S++K VM+ ++K K KG
Sbjct: 188 LAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAKKGKKG 247
Query: 68 S------CHHCGEMGHWKRNCKIYLESL 3
S C +C E GHWKRNCK Y+E L
Sbjct: 248 SAASDAVCFYCKETGHWKRNCKKYMEDL 275
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 203 bits (517), Expect = 5e-50
Identities = 110/257 (42%), Positives = 148/257 (57%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
SS NL SIL+ KLTG N +DW+RNLRIVL+ E +VL P P L ++A + Q ++
Sbjct: 7 SSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 66
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K D SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR +RF SK LF +
Sbjct: 67 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACR 126
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F++N+ +N + T
Sbjct: 127 LAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFNMNNMNRT 186
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSSKKGSXXXXXXXXXXXXXXXXXXXXXKGSCHHC 54
+ +L MLK E S+KK VM+ K + C C
Sbjct: 187 LTKLPGMLKTAEESIKKNSNHVMVMHKRKPNN--------------KKSGPAKDAECFFC 232
Query: 53 GEMGHWKRNCKIYLESL 3
E GHWKRNCK YLE L
Sbjct: 233 KEAGHWKRNCKKYLEQL 249
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 203 bits (517), Expect = 5e-50
Identities = 112/267 (41%), Positives = 151/267 (56%), Gaps = 10/267 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KLTG NF+DW+RNLRIVL+ E ++L P P L ++A + Q ++
Sbjct: 84 SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAAQRRKHE 143
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+ D SC+MLA+MSPELQ Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 144 RRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSKFLFAYR 203
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ +G+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 204 LAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 263
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 264 LAELHGMLKTAEESIKKNSNYVMVMHKLKPNNKKSGQKRKLNSDEITSTSNCKTKVQKTG 323
Query: 68 -----SCHHCGEMGHWKRNCKIYLESL 3
C C E GHWKRNCK YLE L
Sbjct: 324 PAKDAECFFCKETGHWKRNCKKYLEQL 350
>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
gi|557538517|gb|ESR49561.1| hypothetical protein
CICLE_v10033628mg, partial [Citrus clementina]
Length = 263
Score = 201 bits (510), Expect = 3e-49
Identities = 116/256 (45%), Positives = 155/256 (60%), Gaps = 3/256 (1%)
Frame = -1
Query: 761 LHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMI 582
L IL+ +LTG N++DWFRNLRI+L EKI+YVL+ P P + + + + + YQK
Sbjct: 9 LARILENYRLTGPNYVDWFRNLRIILNYEKISYVLDTPKPNEIPEGTSEAERVTYQKWQD 68
Query: 581 DSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSKMQEG 402
D A +LASMS ELQ+QHE+M L+ EQ+R R+E+SK LF +M EG
Sbjct: 69 DDLSAKSYILASMSNELQRQHENMP---------NLYSEQSRTVRYEISKKLFRMRMTEG 119
Query: 401 SSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPEL 222
S + VLKM YIE+L +L F+MD EL+I LIL SL +S+SQF+MN+ +N++E ++ EL
Sbjct: 120 -SVNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQFIMNFNMNKMECSLAEL 178
Query: 221 INMLKIVELSVKKEPKVVMLFD--SSKKG-SXXXXXXXXXXXXXXXXXXXXXKGSCHHCG 51
+ ML E +KK PK VM + S+KKG KG C HCG
Sbjct: 179 LKMLNTAETCIKK-PKDVMAIEGSSAKKGKKKKFQPKAKGGIKKGKANKPNDKGKCFHCG 237
Query: 50 EMGHWKRNCKIYLESL 3
+ GHWKRNCK YL SL
Sbjct: 238 KDGHWKRNCKAYLNSL 253
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 200 bits (508), Expect = 6e-49
Identities = 113/267 (42%), Positives = 151/267 (56%), Gaps = 10/267 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
SS NL SIL+ KLTG NF+DW+RNLRIVL+ E +VL P +L ++A + Q ++
Sbjct: 86 SSFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLPNNALAAQRREHE 145
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K D SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 146 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 205
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+K+ GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 206 LAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 265
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 266 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 325
Query: 68 -----SCHHCGEMGHWKRNCKIYLESL 3
C E GHWKRNCK YLE L
Sbjct: 326 PAKDAECFFYKETGHWKRNCKKYLEQL 352
>ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759138 [Setaria italica]
Length = 272
Score = 198 bits (504), Expect = 2e-48
Identities = 109/261 (41%), Positives = 146/261 (55%), Gaps = 13/261 (4%)
Frame = -1
Query: 752 ILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSE 573
+L+ KL G NF+DW+ NLRIV + EK YVLE P P DA + AYQKH D+
Sbjct: 1 MLEKEKLNGTNFIDWYCNLRIVFRQEKTEYVLEQPYPDDPLVDANAAARRAYQKHCDDA- 59
Query: 572 LASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSKMQEGSSA 393
+C+MLA+M +LQKQ+EH+DA+T++ LR +F+ Q R ER+ +SK LF K+ EGSS
Sbjct: 60 -LNCLMLATMFLDLQKQYEHVDAHTMIEGLRGIFENQVRAERYNISKSLFACKLAEGSSV 118
Query: 392 VQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINM 213
+V+K+ GYIE L LGF + L+I +IL L+ SY F++NY++N +E T+ EL M
Sbjct: 119 SPYVIKIIGYIETLDKLGFELKDHLAIDIILQLLTMSYKPFILNYQMNGMEKTLLELHGM 178
Query: 212 LKIVELSVKKEPKVVMLFDSSKK-------------GSXXXXXXXXXXXXXXXXXXXXXK 72
LKI + S+KK P VM+ K G
Sbjct: 179 LKIAKESIKKNPTHVMMVQKENKKRKRWTPPKGKGKGKVVPNEPPSSKPKRKGKSSPSPD 238
Query: 71 GSCHHCGEMGHWKRNCKIYLE 9
C HC GHW RNCK YLE
Sbjct: 239 DECFHCHLKGHWSRNCKKYLE 259
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 197 bits (500), Expect = 5e-48
Identities = 110/259 (42%), Positives = 148/259 (57%), Gaps = 10/259 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KLTG NF+DW+RNLRIVL+ E +VL P P +L ++A + Q ++
Sbjct: 74 SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 133
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K D SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 134 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 193
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 194 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 253
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 254 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 313
Query: 68 S-----CHHCGEMGHWKRN 27
S C C E GHWKRN
Sbjct: 314 SAKDAECFFCKETGHWKRN 332
>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
Length = 276
Score = 194 bits (493), Expect = 3e-47
Identities = 110/265 (41%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
SS NL SIL+ KL G NF+DW+RNLRIVL+ E +VLE P PT L ++AT+ + ++
Sbjct: 9 SSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRREHE 68
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K + SC+ML ++SPE Q+Q++ +DA+TI+ L +F+ QAR ERF SK LF +
Sbjct: 69 KRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAERFNTSKSLFACR 128
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG++ V+KM GY E L LGF + EL+I LIL SL S+ F+MN+ +++ T
Sbjct: 129 LAEGNAVSPNVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPFIMNFNMDR---T 185
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 186 LAELHGMLKTAEESIKKNSNYVMVMHKCKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 245
Query: 68 -----SCHHCGEMGHWKRNCKIYLE 9
C C E GHWKRNCK YLE
Sbjct: 246 PAKDAECFFCKETGHWKRNCKKYLE 270
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 193 bits (491), Expect = 5e-47
Identities = 112/281 (39%), Positives = 155/281 (55%), Gaps = 12/281 (4%)
Frame = -1
Query: 809 HRLNQPVKRIRMSSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLA 630
H + P+ + SS L SIL KL G NF DW RNLRIVL+ +K +VLE P+P A
Sbjct: 83 HCIMAPIA-VPTSSFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPA 141
Query: 629 DDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIE 450
D+A + AY+K +S SC+MLA+M+ +LQKQ E+++AY ++ L+ +F+ QAR +
Sbjct: 142 DNAAATLKSAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTK 201
Query: 449 RFEVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQF 270
RFE+SK LF K+ EGS ++KM GY + L LGF + EL+ LIL SL SY QF
Sbjct: 202 RFEISKNLFSCKLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQF 261
Query: 269 VMNYRINQIESTIPELINMLKIVELSVKKEPKVVMLFDSSK------------KGSXXXX 126
++N+ +N ++ + EL +LK E S+KK VM+ S KG
Sbjct: 262 ILNFHMNGLDKNLTELHMLLKTAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLD 321
Query: 125 XXXXXXXXXXXXXXXXXKGSCHHCGEMGHWKRNCKIYLESL 3
+ C +C E GHWKRNCK YL L
Sbjct: 322 GIQTNKPKLKTKSGPTQENECFYCKEPGHWKRNCKKYLADL 362
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 193 bits (490), Expect = 7e-47
Identities = 111/267 (41%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
SS L SIL+ KL G NF DW RNLRIVL+ +K +VLE P+P ++A + AY+
Sbjct: 11 SSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKTAYK 70
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K +S SC+MLA+M+ +LQKQ E+++AY ++ L+ +F+ QAR ERFE+SK LFG K
Sbjct: 71 KACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLFGCK 130
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG V+KM GY + L LGF + EL+ LIL SL SY QF++N+ +N ++
Sbjct: 131 LAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKN 190
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSS------------KKG-SXXXXXXXXXXXXXXX 93
+ EL MLK E SVKK V++ S KKG +
Sbjct: 191 LTELHMMLKTAEGSVKKCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQTDKPKTKT 250
Query: 92 XXXXXXKGSCHHCGEMGHWKRNCKIYL 12
+ C +C E+GHWKRNCK YL
Sbjct: 251 KSGPTQENECFYCKELGHWKRNCKKYL 277
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 192 bits (489), Expect = 9e-47
Identities = 109/267 (40%), Positives = 148/267 (55%), Gaps = 10/267 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL IL+ KLT N +DW+RNLRIVL+ E +VL P P L ++A + Q ++
Sbjct: 99 SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+ + SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 159 RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 219 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 279 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 338
Query: 68 -----SCHHCGEMGHWKRNCKIYLESL 3
C E GHWKRNCK YLE L
Sbjct: 339 PAKDAECFFYKETGHWKRNCKKYLEQL 365
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 192 bits (489), Expect = 9e-47
Identities = 109/267 (40%), Positives = 148/267 (55%), Gaps = 10/267 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL IL+ KLT N +DW+RNLRIVL+ E +VL P P L ++A + Q ++
Sbjct: 99 SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+ + SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 159 RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 219 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL MLK E S+KK VM+ ++ K G G
Sbjct: 279 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 338
Query: 68 -----SCHHCGEMGHWKRNCKIYLESL 3
C E GHWKRNCK YLE L
Sbjct: 339 PAKDAECFFYKETGHWKRNCKKYLEQL 365
>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550176|gb|ABA92973.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 591
Score = 188 bits (478), Expect = 2e-45
Identities = 108/267 (40%), Positives = 148/267 (55%), Gaps = 10/267 (3%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KLTG NF+DW+ NLRIVL+ E +VL P L ++A + Q ++
Sbjct: 29 SNFNLRSILEKEKLTGTNFMDWYHNLRIVLRQEHKEFVLTQPFLADLPNNAPATQRREHE 88
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+ + SC+MLA+MS +LQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 89 RRCNEYLDISCLMLATMSLKLQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 148
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 149 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 208
Query: 233 IPELINMLKIVELSVKKEPKVVMLF-----DSSKKGSXXXXXXXXXXXXXXXXXXXXXKG 69
+ EL LK E S+KK VM ++ K G G
Sbjct: 209 LAELHVTLKTAEESIKKNSNHVMGMHKRKPNNKKSGQKRKLNSDEITTTSNSKTKVQKTG 268
Query: 68 -----SCHHCGEMGHWKRNCKIYLESL 3
C C E+GHWKRNCK YLE L
Sbjct: 269 PAKDAECFICKEIGHWKRNCKKYLEQL 295
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 187 bits (475), Expect = 4e-45
Identities = 98/209 (46%), Positives = 134/209 (64%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KLTG NF+DW+RNLRIVL+ E +VL P P +L ++A + Q ++
Sbjct: 7 SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 66
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
K D SC+MLA+MSPELQ+Q+E +DA+TI+ LR +F++QAR ERF SK LF +
Sbjct: 67 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 126
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL S+ F+MN+ +N + T
Sbjct: 127 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 186
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSSK 147
+ EL MLK E S+KK VM+ K
Sbjct: 187 LAELHGMLKTAEESIKKNSNHVMVMHKRK 215
>gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 478
Score = 176 bits (446), Expect = 9e-42
Identities = 93/209 (44%), Positives = 129/209 (61%)
Frame = -1
Query: 773 SSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 594
S+ NL SIL+ KLTG NFLDW+ NLRIVL+ E +VL P P L ++A + Q ++
Sbjct: 7 SNFNLWSILEKEKLTGTNFLDWYHNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQCREHE 66
Query: 593 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSK 414
+ + SC+MLA+MSPELQ+Q+E ++ +TI+ LR +F++QAR ERF SK LF +
Sbjct: 67 RRCNEYLDISCLMLATMSPELQRQYEALNDHTIITGLRNMFEDQARAERFNTSKFLFACR 126
Query: 413 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 234
+ EG+ V+KM GY E L LGF + EL+ LIL SL + F+MN+ IN +
Sbjct: 127 LAEGNPVSLHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPRFEPFIMNFNINNLNRI 186
Query: 233 IPELINMLKIVELSVKKEPKVVMLFDSSK 147
+ EL MLK E S+KK VM+ K
Sbjct: 187 LAELHGMLKTAEESIKKNSNHVMVMHKRK 215
>ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662010, partial [Glycine
max]
Length = 277
Score = 176 bits (445), Expect = 1e-41
Identities = 106/267 (39%), Positives = 153/267 (57%), Gaps = 9/267 (3%)
Frame = -1
Query: 776 MSSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAY 597
MSSL+L IL+ KL N+ DW+RNLRIVL EK+ ++ P P D + ++ +
Sbjct: 1 MSSLSLRGILEPGKLVRANYDDWYRNLRIVLMHEKLIDTIDKP-PMEAPDLSDAEATKVF 59
Query: 596 QKHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGS 417
QK++ + A CI+LASMS ELQ+QH+ MD Y IV HL++++ Q+R+ RF++SK LF S
Sbjct: 60 QKYLDECLTAKCIILASMSSELQRQHQDMDPYEIVEHLKKMYGGQSRMTRFQLSKALFRS 119
Query: 416 KMQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIES 237
+ + VLKM IE+L LG + ELS LI+ SLS+S+SQF++N+ +N+I
Sbjct: 120 SLAANENVGPHVLKMIDLIEQLEKLGCTLGKELSQDLIMQSLSDSFSQFIVNFNMNKISC 179
Query: 236 TIPELINMLKIVE--LSVKKEPKVVMLF--DSSKKGSXXXXXXXXXXXXXXXXXXXXXK- 72
+ E++N+L E ++ KK+ VM+ +S KKG K
Sbjct: 180 DLHEMLNLLIDYENQIASKKKKGTVMVVGNNSKKKGKVPKRKNLGPKGGMTKPMNKRNKI 239
Query: 71 ----GSCHHCGEMGHWKRNCKIYLESL 3
C E GHWKRNCK YL+SL
Sbjct: 240 DQTDAECFFYKEKGHWKRNCKKYLDSL 266
>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
gi|108709282|gb|ABF97077.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 262
Score = 174 bits (440), Expect = 4e-41
Identities = 93/210 (44%), Positives = 129/210 (61%)
Frame = -1
Query: 776 MSSLNLHSILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAY 597
+SS NL SIL+ +LTG NF+DW+ NL IVL+ E +VL P P L ++A Q +
Sbjct: 6 LSSFNLRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVAQRSEH 65
Query: 596 QKHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGS 417
+K D SC+MLA+MSPE Q+Q+E +DA+TI+ LR +F++QAR ERF K LF
Sbjct: 66 EKRCNDYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARAERFNTLKSLFAC 125
Query: 416 KMQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIES 237
++ EG+ V+KM GY E L LG + EL+ LIL SL S+ F+MN+ +N + S
Sbjct: 126 RLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPFIMNFNMNNLNS 185
Query: 236 TIPELINMLKIVELSVKKEPKVVMLFDSSK 147
++ EL MLK E S+KK VM+ K
Sbjct: 186 SLAELHGMLKTAEESIKKNSNHVMVMHKCK 215
>ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Populus trichocarpa]
gi|550345621|gb|ERP64626.1| hypothetical protein
POPTR_0002s22700g [Populus trichocarpa]
Length = 171
Score = 172 bits (437), Expect = 1e-40
Identities = 81/164 (49%), Positives = 120/164 (73%)
Frame = -1
Query: 698 LRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQH 519
+RI++K EK Y+LE P+ + +D + +++H+ D E +C+MLA +S ++Q+QH
Sbjct: 1 MRIIIKQEKRMYILENPILNAPFEDVGEEFRNEHERHVDDDEQTACVMLAIISYKIQRQH 60
Query: 518 EHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLG 339
E+M+AYTI+ HL+ELFDE +R R++ SK LF KM +GSS VLKMNGYIE+L LG
Sbjct: 61 ENMNAYTIIMHLKELFDETSRTNRYQTSKELFRCKMTKGSSMNTHVLKMNGYIEKLEQLG 120
Query: 338 FAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINMLK 207
F MD +LS+ L+L SL ++SQF+MNY +N+++ST+PEL NML+
Sbjct: 121 FVMDRKLSVELVLQSLPQNFSQFIMNYHMNKLDSTLPELFNMLR 164