BLASTX nr result
ID: Zingiber25_contig00036592
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00036592
(254 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003576676.1| PREDICTED: probable polygalacturonase-like [... 62 8e-08
ref|XP_002462564.1| hypothetical protein SORBIDRAFT_02g028280 [S... 59 9e-07
ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|3... 57 2e-06
gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago tru... 57 2e-06
ref|XP_004957175.1| PREDICTED: probable polygalacturonase-like [... 57 3e-06
gb|EMJ03269.1| hypothetical protein PRUPE_ppa005960mg [Prunus pe... 56 4e-06
gb|EEE69946.1| hypothetical protein OsJ_29824 [Oryza sativa Japo... 56 4e-06
gb|EEC84787.1| hypothetical protein OsI_31840 [Oryza sativa Indi... 56 4e-06
ref|NP_001063526.1| Os09g0487600 [Oryza sativa Japonica Group] g... 56 4e-06
dbj|BAJ89865.1| predicted protein [Hordeum vulgare subsp. vulgar... 56 6e-06
>ref|XP_003576676.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 461
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = -3
Query: 186 VVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIE 7
V SV+D+GA G+G YDT GRV PA GDYLTATV LR+GVVLD+
Sbjct: 31 VFSVVDYGAAGDGARYDTAAIQAAVNACAAAGGGRVLLPAPGDYLTATVHLRSGVVLDVP 90
Query: 6 PG 1
PG
Sbjct: 91 PG 92
>ref|XP_002462564.1| hypothetical protein SORBIDRAFT_02g028280 [Sorghum bicolor]
gi|241925941|gb|EER99085.1| hypothetical protein
SORBIDRAFT_02g028280 [Sorghum bicolor]
Length = 462
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/64 (51%), Positives = 37/64 (57%)
Frame = -3
Query: 192 STVVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLD 13
S V SV D+GA G+G YDT GRV PA GDYLTATV LR+ VVLD
Sbjct: 30 SRVFSVADYGAAGDGSHYDTAAIQATVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLD 89
Query: 12 IEPG 1
+ PG
Sbjct: 90 VPPG 93
>ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|355500208|gb|AES81411.1|
Polygalacturonase [Medicago truncatula]
Length = 482
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = -3
Query: 180 SVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIEPG 1
SV ++GA+G+G YDTV R+ FP+ G+YLTAT+ LR+GVVL++EPG
Sbjct: 49 SVTEYGAIGDGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGVVLNVEPG 108
>gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago truncatula]
Length = 205
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = -3
Query: 180 SVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIEPG 1
SV ++GA+G+G YDTV R+ FP+ G+YLTAT+ LR+GVVL++EPG
Sbjct: 49 SVTEYGAIGDGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGVVLNVEPG 108
>ref|XP_004957175.1| PREDICTED: probable polygalacturonase-like [Setaria italica]
Length = 461
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = -3
Query: 192 STVVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLD 13
S V SV+D+GA G+G YDT GRV PA G+YLTATV LR+ VVL+
Sbjct: 28 SRVFSVVDYGAAGDGSRYDTAAIQAAVDACAAAGGGRVLLPAPGNYLTATVHLRSRVVLE 87
Query: 12 IEPG 1
+ PG
Sbjct: 88 VAPG 91
>gb|EMJ03269.1| hypothetical protein PRUPE_ppa005960mg [Prunus persica]
Length = 435
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 192 STVVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLD 13
+T +SV+D GA G+G YDT V FP G YLTAT+RL++GV+LD
Sbjct: 47 ATTISVVDFGATGDGVHYDTSAIQSAIDSCPALSPCHVTFPPGRTYLTATIRLKSGVILD 106
Query: 12 IEPG 1
I+ G
Sbjct: 107 IQEG 110
>gb|EEE69946.1| hypothetical protein OsJ_29824 [Oryza sativa Japonica Group]
Length = 456
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = -3
Query: 186 VVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIE 7
V SV D+GA G+G YDT GRV PA GDYLTATV LR+ VVLD+
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 6 PG 1
PG
Sbjct: 86 PG 87
>gb|EEC84787.1| hypothetical protein OsI_31840 [Oryza sativa Indica Group]
Length = 457
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = -3
Query: 186 VVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIE 7
V SV D+GA G+G YDT GRV PA GDYLTATV LR+ VVLD+
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 6 PG 1
PG
Sbjct: 86 PG 87
>ref|NP_001063526.1| Os09g0487600 [Oryza sativa Japonica Group]
gi|113631759|dbj|BAF25440.1| Os09g0487600 [Oryza sativa
Japonica Group]
Length = 452
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = -3
Query: 186 VVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIE 7
V SV D+GA G+G YDT GRV PA GDYLTATV LR+ VVLD+
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 6 PG 1
PG
Sbjct: 86 PG 87
>dbj|BAJ89865.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525659|dbj|BAJ88876.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 464
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/62 (50%), Positives = 36/62 (58%)
Frame = -3
Query: 186 VVSVIDHGAMGNGRCYDTVXXXXXXXXXXXXXXGRVRFPAGGDYLTATVRLRTGVVLDIE 7
V SV D+GA G+G YDT GRV PA GDYLTATV LR+ VVL++
Sbjct: 34 VFSVADYGAAGDGTRYDTAAIQAAVDACAGAGGGRVLLPAPGDYLTATVHLRSRVVLEVA 93
Query: 6 PG 1
PG
Sbjct: 94 PG 95