BLASTX nr result

ID: Zingiber25_contig00036333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036333
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004505557.1| PREDICTED: protein TPX2-like [Cicer arietinum]     57   3e-06
ref|XP_002517880.1| protein with unknown function [Ricinus commu...    55   1e-05

>ref|XP_004505557.1| PREDICTED: protein TPX2-like [Cicer arietinum]
          Length = 756

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/66 (45%), Positives = 38/66 (57%)
 Frame = -1

Query: 312 PSPFMPKIREGRSIQIDSLCDFGNVDDEQKADISKEDSHQAEPRTEVDKIARSSKYNLES 133
           PSPFMPKI+ GRSI + +LCDF   DD  K   + E+S   E +T+   +A  SK   E 
Sbjct: 52  PSPFMPKIKAGRSITVGTLCDFSEADDMPKTSANVEESSVLESKTQPQSMA--SKIKEED 109

Query: 132 ETNVGN 115
           E N  N
Sbjct: 110 EDNKEN 115


>ref|XP_002517880.1| protein with unknown function [Ricinus communis]
           gi|223542862|gb|EEF44398.1| protein with unknown
           function [Ricinus communis]
          Length = 702

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
 Frame = -1

Query: 312 PSPFMPKIREGRSIQIDSLCDFGNVDDEQKADISKED------SHQAEPRTEV------- 172
           PSPFMP+I+ GRS +++SLCDF   + +Q+   S  D      S + +P+ E+       
Sbjct: 53  PSPFMPRIKTGRSFKVESLCDFSEAEQKQEVTESSSDSPSPSSSSEIKPQVEIMNSTETK 112

Query: 171 DKIARSSKYNLESETNVGNTQNQEVE-KKINSSELDSEVNLC 49
           +K     + N E+  N+ N   QE + + I + E +S+   C
Sbjct: 113 EKETTLQEANKENNANLVNVSCQEDKMETIRAEETESKTETC 154


Top