BLASTX nr result
ID: Zingiber25_contig00036279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00036279
(642 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 320 2e-85
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 318 1e-84
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 317 2e-84
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 315 5e-84
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 315 7e-84
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 315 7e-84
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 313 2e-83
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 313 3e-83
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 311 8e-83
gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 311 8e-83
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 311 1e-82
gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 311 1e-82
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 311 1e-82
gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 311 1e-82
gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 310 2e-82
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 310 2e-82
sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carbox... 310 3e-82
gb|AFS41727.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 310 3e-82
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 309 4e-82
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 309 5e-82
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 320 bits (820), Expect = 2e-85
Identities = 151/182 (82%), Positives = 170/182 (93%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKS-ADITSLASNGGRVQCM 435
MASSM+STA VA+ R+SPAQA+MVAPFTGLKS +AFPVT+K+ DIT+LA+NGGRVQCM
Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT EQLAKE++YLLR GW+PCLEFELEHGFVYRENARSPGY
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC+D+ QVLKEL+EA K YPN+F+RIIGFDNVRQVQCISFIAYKPP
Sbjct: 121 YDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPP 180
Query: 74 GY 69
+
Sbjct: 181 SF 182
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 318 bits (814), Expect = 1e-84
Identities = 155/178 (87%), Positives = 167/178 (93%), Gaps = 1/178 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 432
MASSMIS+A+V+ RSSPAQA MVAPFTGLKSAA+FPVT+K+ DITS+ASNGGRVQCMQ
Sbjct: 1 MASSMISSASVS--RSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQ 58
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPPLGKKK+ETLSYLPDLT EQLAKE+DYLLR GWIPCLEFELEHGFVYREN RSPGYY
Sbjct: 59 VWPPLGKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 118
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 78
DGRYWTMWKLPMFGC+DS QVLKEL+EAKK YPN+FIRIIGFDN RQVQCISFIAYKP
Sbjct: 119 DGRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKP 176
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 317 bits (812), Expect = 2e-84
Identities = 151/179 (84%), Positives = 163/179 (91%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQV 429
MASSMIS+ VAT S+PAQA MVAPFTGLKS++AFPVT+KS DITS+ASNGGRVQCMQV
Sbjct: 1 MASSMISSGTVATV-SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQV 59
Query: 428 WPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYD 249
WPPLG KK+ETLSYLP L+ E LAKE+DYLLR W+PCLEFELEHGFVYREN RSPGYYD
Sbjct: 60 WPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYD 119
Query: 248 GRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
GRYWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 120 GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPG 178
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 315 bits (808), Expect = 5e-84
Identities = 156/182 (85%), Positives = 166/182 (91%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 315 bits (807), Expect = 7e-84
Identities = 156/182 (85%), Positives = 166/182 (91%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 315 bits (807), Expect = 7e-84
Identities = 156/182 (85%), Positives = 166/182 (91%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 313 bits (803), Expect = 2e-83
Identities = 149/179 (83%), Positives = 166/179 (92%), Gaps = 1/179 (0%)
Frame = -2
Query: 608 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 432
MASS+IS+A+VA +R++PAQA+MVAPFTGLKS AAFPVT+K DITSL SNGGRVQCM+
Sbjct: 1 MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPPLG KK+ETLSYLP LT E+LAKE+DYLLRSGW+PCLEFELEHG+VYREN RSPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
DGRYWTMWKLPMFGC DS+QVL E+EE KKEYPNAFIRIIGFDNVRQVQCISFIA+KPP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKPP 179
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 313 bits (802), Expect = 3e-83
Identities = 155/182 (85%), Positives = 165/182 (90%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT RSSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVLKELE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 311 bits (798), Expect = 8e-83
Identities = 148/179 (82%), Positives = 164/179 (91%), Gaps = 1/179 (0%)
Frame = -2
Query: 608 MASSMISTAAVAT-TRSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 432
MASS+IS+A VA +R+ PAQA+MVAPFTGLKS AAFPVT+K DITSL SNGGRVQCM+
Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPPLG KK+ETLSYLP LT EQL+KE+DYLLRSGW+PCLEFELEHGFVYRE+ SPGYY
Sbjct: 61 VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYY 120
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
DGRYWTMWKLPMFGC DS+QVLKE+EE KKEYPNA+IRIIGFDNVRQVQCISFIA+KPP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKPP 179
>gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium darwinii]
Length = 182
Score = 311 bits (798), Expect = 8e-83
Identities = 154/182 (84%), Positives = 165/182 (90%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVL+ELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLEELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 311 bits (797), Expect = 1e-82
Identities = 149/183 (81%), Positives = 162/183 (88%), Gaps = 3/183 (1%)
Frame = -2
Query: 608 MASSMISTAAVATT---RSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQC 438
MASSMIS+ VAT R +PAQA MVAPFTGLKS++A PVT+KS DITS+ASNGGRVQC
Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60
Query: 437 MQVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPG 258
MQVWPPLG KK+ETLSYLP L+ E LAKE+DYLLR W+PCLEFELEHGFVYREN RSPG
Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120
Query: 257 YYDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 78
YYDGRYWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
Query: 77 PGY 69
G+
Sbjct: 181 AGF 183
>gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 179
Score = 311 bits (797), Expect = 1e-82
Identities = 152/181 (83%), Positives = 165/181 (91%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 432
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCMQ
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPP GKKK+ETLSYLPDLT QLAKE+DYLLRS W+PCLEFELE GFV+R+ + P YY
Sbjct: 59 VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSNLPTYY 118
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178
Query: 71 Y 69
+
Sbjct: 179 F 179
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 311 bits (797), Expect = 1e-82
Identities = 150/181 (82%), Positives = 165/181 (91%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKS-ADITSLASNGGRVQCMQ 432
MAS+M+S+A V R+SPAQA +VAPFTGLKSA+AFP T+K+ DITS+ASNGGRVQCMQ
Sbjct: 1 MASAMMSSATVVN-RASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQ 59
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRSGWIPCLEFELEHGFVYRE+ SPGYY
Sbjct: 60 VWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYY 119
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC DS+QVLKELEEAKK YP+AFIRIIGFDN RQVQCISFIAYKPP
Sbjct: 120 DGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKPPS 179
Query: 71 Y 69
+
Sbjct: 180 F 180
>gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366486|gb|AFS41740.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366528|gb|AFS41761.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 311 bits (796), Expect = 1e-82
Identities = 152/181 (83%), Positives = 165/181 (91%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 432
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCMQ
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPP GKKK+ETLSYLPDLT QLAKE+DYLLRS W+PCLEFELE GFV+R+ + P YY
Sbjct: 59 VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEEGFVHRKYSSLPTYY 118
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178
Query: 71 Y 69
+
Sbjct: 179 F 179
>gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 310 bits (795), Expect = 2e-82
Identities = 152/181 (83%), Positives = 165/181 (91%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQ 432
MASSMIS+A +AT +SPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCMQ
Sbjct: 1 MASSMISSATIAT--ASPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQ 58
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPP GKKK+ETLSYLPDLT QLAKE+DYLLRS W+PCLEFELE GFV+R+ + P YY
Sbjct: 59 VWPPTGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWVPCLEFELEDGFVHRKYSSLPTYY 118
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 119 DGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 178
Query: 71 Y 69
+
Sbjct: 179 F 179
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 310 bits (795), Expect = 2e-82
Identities = 150/181 (82%), Positives = 161/181 (88%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATTRS-SPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 432
MASSM+S+AAVA +S SP QA MVAPFTGLKSA+AFPVT+KS DITSL SNGGRVQCMQ
Sbjct: 1 MASSMLSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQ 60
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPP+G KK+ETLSYLP LT QLAKEIDYLLRSGW+PCLEFE E GFVYRE+ SPGYY
Sbjct: 61 VWPPVGLKKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYY 120
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC DSAQVLKELEE KK YP AF+RIIGFDN RQVQCISFIA+KPPG
Sbjct: 121 DGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKPPG 180
Query: 71 Y 69
Y
Sbjct: 181 Y 181
>sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|450505|emb|CAA38026.1| ribulose
bisphosphate carboxylase [Gossypium hirsutum]
gi|371942044|gb|AEX60834.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366448|gb|AFS41721.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366458|gb|AFS41726.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366488|gb|AFS41741.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366504|gb|AFS41749.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366516|gb|AFS41755.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 182
Score = 310 bits (793), Expect = 3e-82
Identities = 153/182 (84%), Positives = 164/182 (90%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVL+ELE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>gb|AFS41727.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366474|gb|AFS41734.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366490|gb|AFS41742.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
Length = 182
Score = 310 bits (793), Expect = 3e-82
Identities = 153/182 (84%), Positives = 164/182 (90%), Gaps = 2/182 (1%)
Frame = -2
Query: 608 MASSMISTAAVATTR-SSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCM 435
MASSMIS+A +AT SSPAQANMVAPFTGLKSA+AFPVT+K+ DITSLASNGGRVQCM
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60
Query: 434 QVWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGY 255
QVWPPLGKKK+ETLSYLPDLT QLAKE+DYLLRS WIPCLEFELE GFV+R+ + P Y
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120
Query: 254 YDGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPP 75
YDGRYWTMWKLPMFGC DSAQVL+ELE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180
Query: 74 GY 69
GY
Sbjct: 181 GY 182
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 309 bits (792), Expect = 4e-82
Identities = 146/181 (80%), Positives = 164/181 (90%), Gaps = 1/181 (0%)
Frame = -2
Query: 608 MASSMISTAAVATT-RSSPAQANMVAPFTGLKSAAAFPVTKKSADITSLASNGGRVQCMQ 432
MASS++S+AAVA R+SPAQA+MVAPFTGLKSA+AFPVT+KSADITSLASNGGRVQCMQ
Sbjct: 1 MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60
Query: 431 VWPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYY 252
VWPP+GKKK+ETLSYLP L+ E+L KEI+YLLR W+PCLEFELE GFVYR+N +SPGYY
Sbjct: 61 VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYY 120
Query: 251 DGRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 72
DGRYWTMWKLPMFGC D QV KEL+EA K YPNAF+RIIGFDN RQVQCISFIAYKPPG
Sbjct: 121 DGRYWTMWKLPMFGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180
Query: 71 Y 69
+
Sbjct: 181 F 181
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 309 bits (791), Expect = 5e-82
Identities = 148/180 (82%), Positives = 165/180 (91%), Gaps = 1/180 (0%)
Frame = -2
Query: 605 ASSMISTAAVATTRSSPAQANMVAPFTGLKSAAAFPVTKKSA-DITSLASNGGRVQCMQV 429
++SM+S+ AV R++PAQA MVAPFTGLKSA+AFPVT+KS+ DITSL+SNGGRVQCMQV
Sbjct: 3 SASMLSSPAV---RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQV 59
Query: 428 WPPLGKKKYETLSYLPDLTLEQLAKEIDYLLRSGWIPCLEFELEHGFVYRENARSPGYYD 249
WPP+GKKK+ETLSYLP L+ E LAKE+DYLLRSGW+PCLEFELEHGFVYRE+ SPGYYD
Sbjct: 60 WPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYD 119
Query: 248 GRYWTMWKLPMFGCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 69
GRYWTMWKLPMFGC DSAQVLKELEEAKK YP AFIRIIGFDN RQVQCISFIAYKPPG+
Sbjct: 120 GRYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKPPGF 179