BLASTX nr result

ID: Zingiber25_contig00036209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036209
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75260.1| hypothetical protein ZEAMMB73_797679 [Zea mays]         57   2e-06
ref|XP_002437929.1| hypothetical protein SORBIDRAFT_10g004965 [S...    55   7e-06
ref|XP_002437706.1| hypothetical protein SORBIDRAFT_10g001107 [S...    55   1e-05

>gb|AFW75260.1| hypothetical protein ZEAMMB73_797679 [Zea mays]
          Length = 1147

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/70 (52%), Positives = 43/70 (61%)
 Frame = -3

Query: 225 FPTTCEKLEGISHRDSDAQSFNPESSKIQTPYEQMHGTLSKSISFNNSKVPKVKQLLNNV 46
           F +  +K +  SH+ S +   N  + K Q P  Q  G LSKS SFNNSKVPKVKQLLN V
Sbjct: 346 FVSDADKGKQPSHQVSTSLVVN--ALKNQAP--QSRGQLSKSTSFNNSKVPKVKQLLNEV 401

Query: 45  PWKQNFAKES 16
           P K  F KES
Sbjct: 402 PQKPKFLKES 411


>ref|XP_002437929.1| hypothetical protein SORBIDRAFT_10g004965 [Sorghum bicolor]
           gi|241916152|gb|EER89296.1| hypothetical protein
           SORBIDRAFT_10g004965 [Sorghum bicolor]
          Length = 136

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/59 (52%), Positives = 38/59 (64%)
 Frame = -3

Query: 192 SHRDSDAQSFNPESSKIQTPYEQMHGTLSKSISFNNSKVPKVKQLLNNVPWKQNFAKES 16
           SH+ + + +FN   ++   P     G LSKS SFNNSKVPKVKQLLN VP K+   KES
Sbjct: 61  SHQVATSWAFNALKNQAPLP----RGQLSKSTSFNNSKVPKVKQLLNEVPQKRKIFKES 115


>ref|XP_002437706.1| hypothetical protein SORBIDRAFT_10g001107 [Sorghum bicolor]
           gi|241915929|gb|EER89073.1| hypothetical protein
           SORBIDRAFT_10g001107 [Sorghum bicolor]
          Length = 289

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/72 (47%), Positives = 45/72 (62%)
 Frame = -3

Query: 231 KLFPTTCEKLEGISHRDSDAQSFNPESSKIQTPYEQMHGTLSKSISFNNSKVPKVKQLLN 52
           ++F +  +K +  SH+ + + + N  + K Q P  Q  G LSKS SFNNSKVPKVKQLLN
Sbjct: 176 EIFVSDADKGKQPSHQVATSLAVN--ALKNQAP--QSRGQLSKSTSFNNSKVPKVKQLLN 231

Query: 51  NVPWKQNFAKES 16
            VP K    K+S
Sbjct: 232 EVPQKPKILKDS 243


Top