BLASTX nr result

ID: Zingiber25_contig00036205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036205
         (381 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006661432.1| PREDICTED: translation initiation factor IF-...    76   4e-12
ref|XP_004975733.1| PREDICTED: translation initiation factor IF-...    74   2e-11
ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g...    72   8e-11
gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indi...    69   5e-10
ref|XP_004975734.1| PREDICTED: translation initiation factor IF-...    68   1e-09
gb|EMT25102.1| Translation initiation factor IF-2 [Aegilops taus...    67   2e-09
tpg|DAA37623.1| TPA: putative translation elongation/initiation ...    64   2e-08
ref|XP_003566671.1| PREDICTED: translation initiation factor IF-...    61   2e-07
ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [S...    55   1e-05

>ref|XP_006661432.1| PREDICTED: translation initiation factor IF-2, mitochondrial-like
           [Oryza brachyantha]
          Length = 711

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLN-AFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRI 231
           MAWR+LR+K +  GL    +N AF + H  +  HF  G+ G +   ++   +    N   
Sbjct: 1   MAWRMLRRKDFHTGL----VNLAFRADHG-AAKHFSSGAFGNLAGFFLS-ETPKGANNCT 54

Query: 232 SSNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
           +     IR FHA  +MLAW +K +EV GLK  +KEK +RRENR Q PVEA
Sbjct: 55  AYRHCTIRNFHAGLYMLAWSKKREEVAGLKAPKKEKRVRRENRTQPPVEA 104


>ref|XP_004975733.1| PREDICTED: translation initiation factor IF-2, mitochondrial-like
           isoform X1 [Setaria italica]
          Length = 711

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/109 (40%), Positives = 60/109 (55%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K +  GL    +N           HF  G+ G++   Y       +    + 
Sbjct: 1   MAWRMLRRKEFHTGL----VNLAFRADHWGTKHFSDGAVGKLAQFYRSERPNHAARC-VP 55

Query: 235 SNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
           SN   IR FHA  +MLAW RK+++V GLK  +KEK ++RENR Q PVEA
Sbjct: 56  SNHFIIRNFHAGVYMLAWSRKKEDVVGLKAPKKEKRVKRENRTQPPVEA 104


>ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group]
           gi|50725362|dbj|BAD34434.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|50726238|dbj|BAD33814.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa
           Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical
           protein OsJ_30008 [Oryza sativa Japonica Group]
           gi|215686824|dbj|BAG89674.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 716

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K +  GL    +N           +F  G+ G++ D  +  +    + G  +
Sbjct: 1   MAWRMLRRKDFHTGL----VNLASRVDHGGAKNFSSGTFGKLADFVLSDTHTPIVKGAAN 56

Query: 235 SNILN---IRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
                   IR FHA  +MLAW RK +EV GLK  +KEK ++RE R Q PVEA
Sbjct: 57  CTAYKHCTIRNFHAGVYMLAWSRKREEVAGLKAPKKEKRVKRETRTQPPVEA 108


>gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indica Group]
          Length = 716

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K +  GL    +N           +F  G+ G++    +  +    + G  +
Sbjct: 1   MAWRMLRRKDFHTGL----VNLASRVDHGGAKNFSSGTFGKLAGFVLSDTHTPIVKGAAN 56

Query: 235 SNILN---IRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
                   IR FHA  +MLAW RK +EV GLK  +KEK ++RE R Q PVEA
Sbjct: 57  CTAYKHCTIRNFHAGVYMLAWSRKREEVAGLKAPKKEKRVKRETRTQPPVEA 108


>ref|XP_004975734.1| PREDICTED: translation initiation factor IF-2, mitochondrial-like
           isoform X2 [Setaria italica]
          Length = 701

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/109 (38%), Positives = 56/109 (51%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K +  GL    +N           HF  G+ G++   Y           R  
Sbjct: 1   MAWRMLRRKEFHTGL----VNLAFRADHWGTKHFSDGAVGKLAQFY-----------RSE 45

Query: 235 SNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
                 R FHA  +MLAW RK+++V GLK  +KEK ++RENR Q PVEA
Sbjct: 46  RPNHAARNFHAGVYMLAWSRKKEDVVGLKAPKKEKRVKRENRTQPPVEA 94


>gb|EMT25102.1| Translation initiation factor IF-2 [Aegilops tauschii]
          Length = 707

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/109 (37%), Positives = 58/109 (53%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K    GL    +N           HF  G+ GR+     G     + N  + 
Sbjct: 2   MAWRMLRRKDVHTGL----VNLAFRLDHGGTKHFATGTLGRLPQFVHGNGLQGAANCTVF 57

Query: 235 SNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
                IR FHA  +MLAW +K+++V GLK  ++EK +R+E R+Q PVEA
Sbjct: 58  KQS-TIRNFHAGVYMLAWHQKKEDVVGLKAPKREKRVRKETRSQPPVEA 105


>tpg|DAA37623.1| TPA: putative translation elongation/initiation factor family
           protein [Zea mays]
          Length = 712

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRM--LDSYIGLSSGASINGR 228
           MAWR++R+K +  GL        ++     G   FF S G++  L    G          
Sbjct: 1   MAWRMMRRKDFHTGL------VTLAFRKDLGFKKFFSS-GKIGNLSQVYGSDKPKYSANC 53

Query: 229 ISSNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
           + SN   IR F+A  ++LAW +K ++V GLK  +KEK +++ENR Q PVEA
Sbjct: 54  MPSNHFTIRNFNAGVYLLAWSQKREDVVGLKAPKKEKRVKKENRTQPPVEA 104


>ref|XP_003566671.1| PREDICTED: translation initiation factor IF-2-like [Brachypodium
           distachyon]
          Length = 711

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
 Frame = +1

Query: 55  MAWRVL--RKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGR 228
           MAWRVL  RK V+   LN +F           G   F          +I  +    + G 
Sbjct: 1   MAWRVLLRRKDVHTGLLNLAF--------RAGGTECFSSGAVAKPSQFIHCNK---LQGA 49

Query: 229 ISSNILN---IRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
            +  I     IR FHA  +MLAW RK+++V GLK  +KEK +R+E R Q PVEA
Sbjct: 50  ANCTIFKHYPIRNFHAGVYMLAWSRKKEDVVGLKAPKKEKRVRKETRTQPPVEA 103


>ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [Sorghum bicolor]
           gi|241937724|gb|EES10869.1| hypothetical protein
           SORBIDRAFT_06g017820 [Sorghum bicolor]
          Length = 685

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/109 (32%), Positives = 51/109 (46%)
 Frame = +1

Query: 55  MAWRVLRKKVYQQGLNASFLNAFVSKHSKSGVHFFFGSHGRMLDSYIGLSSGASINGRIS 234
           MAWR+LR+K +  GL    +N    K   +  HF  G+ G +                  
Sbjct: 1   MAWRMLRRKDFHTGL----VNLAFRKDHGAKKHFSNGTIGNL------------------ 38

Query: 235 SNILNIRYFHATAFMLAWRRKEDEVPGLKLQRKEKPIRRENRNQAPVEA 381
                     A  +MLAW +K ++V GLK  ++EK +++ENR Q PVEA
Sbjct: 39  ----------ARVYMLAWSQKREDVVGLKAPKREKRVKKENRTQPPVEA 77


Top