BLASTX nr result

ID: Zingiber25_contig00036167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036167
         (612 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304822.2| hypothetical protein POPTR_0003s18900g [Popu...    63   7e-08
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...    60   4e-07
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...    60   6e-07
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]    60   6e-07
ref|XP_004306467.1| PREDICTED: transcription factor GAMYB-like [...    59   1e-06
gb|EOY19496.1| Myb domain protein 65, putative isoform 1 [Theobr...    57   4e-06
gb|EOY19498.1| Myb domain protein 65, putative isoform 3 [Theobr...    56   9e-06

>ref|XP_002304822.2| hypothetical protein POPTR_0003s18900g [Populus trichocarpa]
           gi|566163452|ref|XP_006385964.1| hypothetical protein
           POPTR_0003s18900g [Populus trichocarpa]
           gi|550343500|gb|EEE79801.2| hypothetical protein
           POPTR_0003s18900g [Populus trichocarpa]
           gi|550343501|gb|ERP63761.1| hypothetical protein
           POPTR_0003s18900g [Populus trichocarpa]
          Length = 568

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
 Frame = -3

Query: 610 SAGVFSSSTSLISAGS-VEEFPYPNILSGSGNMMATGNFSCHKVG----------ERGTS 464
           +A +FS  T + ++GS ++E P    L+GS       +    K+           E+ + 
Sbjct: 430 AASLFSECTPISASGSSLDESPPTETLTGSKRKFGCSSECNMKLEPVDHTWTADREKESY 489

Query: 463 FKVDFSRPDSILGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXXXXXXX 284
            ++D +RPD++L S WLE+DS   K+  ++ +++ATLLG D+ S YK             
Sbjct: 490 TQLDITRPDALLDSDWLEHDSGYGKDQVIMTEAIATLLGDDLSSEYK------QMAAGAS 543

Query: 283 XXXXXXLDSYQWNKMPHACQM 221
                 L S  WN MP  CQM
Sbjct: 544 TDHGWGLGSCSWNNMPAVCQM 564


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -3

Query: 610 SAGVFSSSTSLISAGSVEEFPYPNILSGSGNMMATGNFSCHKVGERG--TSFKVDFSRPD 437
           +  +FS  T + ++GS  + P P   + +G ++ T   S     ER   T+ +VD +RPD
Sbjct: 427 ATSLFSECTPISASGSSLDEPPPTD-TFTGCIVKTELVSQPWSPERDKETTTRVDITRPD 485

Query: 436 SILGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXXXXXXXXXXXXXLDS 257
           ++L S WL   S  +K+  ++ D++ATLLG D+ S+YK                   L S
Sbjct: 486 ALLASDWLGQGSGYIKDQVIMTDNIATLLGDDLSSDYK-----QMSAGASTSNQVWGLGS 540

Query: 256 YQWNKMPHACQM 221
             WN MP  CQM
Sbjct: 541 CAWNNMPAVCQM 552


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
 Frame = -3

Query: 610 SAGVFSSSTSLISAGSV-------EEFPYPNILSGSGNMMATGNFSCHKVGERGTSFKVD 452
           +  +FS  T + ++GS        E FP  N+ +   + + T +      GE+ TS ++D
Sbjct: 430 TTSIFSECTPISASGSSLDEHPPSETFPGCNVKAEPVDQVWTPD------GEKETSTQLD 483

Query: 451 FSRPDSILGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXXXXXXXXXXX 272
           FSRPD +LGS W++  +   K+  ++ND++A+L   D  +NYK                 
Sbjct: 484 FSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTSNQGWGLGC 543

Query: 271 XXLDSYQWNKMPHACQM 221
                  WN +P  CQM
Sbjct: 544 C-----AWNNLPPVCQM 555


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
 Frame = -3

Query: 610 SAGVFSSSTSLISAGS-VEEFPYPNILSGSGNMMATGNFSCHKVGERGTSFKVDFSRPDS 434
           +  +FS  T + ++GS ++E P      G        +      GE+ TS ++DFSRPD 
Sbjct: 326 TTSIFSECTPISASGSSLDEHPPSETFPGCSVKAEPVDQVWTPDGEKETSTQLDFSRPDV 385

Query: 433 ILGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXXXXXXXXXXXXXLDSY 254
           +LGS W++  +   K+  ++ND++A+L   D  +NYK                       
Sbjct: 386 LLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTSNQGWGLGCC----- 440

Query: 253 QWNKMPHACQM 221
            WN +P  CQM
Sbjct: 441 AWNNLPPVCQM 451


>ref|XP_004306467.1| PREDICTED: transcription factor GAMYB-like [Fragaria vesca subsp.
           vesca]
          Length = 562

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -3

Query: 601 VFSSSTSLISAGS-VEEFPYPNILSGSGNMMATGNFSCHKVGERGTSFKVDFSRPDSILG 425
           +FS  T + ++GS +EE P    ++GS       + +     ++ +S  +D+ RPD++LG
Sbjct: 435 LFSECTPISASGSSLEEAPPAETITGSNVKPEPADHAWTPEKQKESSPPLDYIRPDALLG 494

Query: 424 SVWLEYDSCRVKEHTV--LNDSLATLLGQDVCSNYKXXXXXXXXXXXXXXXXXXXLDSYQ 251
           S WLE  S  +K+ ++  +ND++ +LLG+D+ + YK                   L S  
Sbjct: 495 SDWLE-PSTGIKDQSIMNMNDAIVSLLGEDLVTEYK-----HMASGTSTSNQGWGLGSCP 548

Query: 250 WNKMPHACQM 221
           WN MP  CQM
Sbjct: 549 WNNMPAVCQM 558


>gb|EOY19496.1| Myb domain protein 65, putative isoform 1 [Theobroma cacao]
           gi|508727600|gb|EOY19497.1| Myb domain protein 65,
           putative isoform 1 [Theobroma cacao]
          Length = 555

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
 Frame = -3

Query: 592 SSTSLIS------AGSVEEFPYPNILSGSGNMMATGNFSCHKVGERGTSFKVDFSRPDSI 431
           S+TSL S        S++E P     + S     T +       ++    ++D +RPD++
Sbjct: 427 SATSLFSECISASGSSLDEQPPAETFTESHVKSETADHVFTPEIQKEAPIRLDSTRPDTL 486

Query: 430 LGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXXXXXXXXXXXXXLDSYQ 251
           L S WLE      K+ T+++D++ATLLG D+ S YK                   L S  
Sbjct: 487 LASNWLEQGCVYDKDQTIMSDAIATLLGDDLSSEYK-----NMAAGTSISSQAWGLGSCA 541

Query: 250 WNKMPHACQM 221
           WN MP  CQM
Sbjct: 542 WNNMPAVCQM 551


>gb|EOY19498.1| Myb domain protein 65, putative isoform 3 [Theobroma cacao]
          Length = 540

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = -3

Query: 478 ERGTSFKVDFSRPDSILGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKXXXXXXXX 299
           ++    ++D +RPD++L S WLE      K+ T+++D++ATLLG D+ S YK        
Sbjct: 456 QKEAPIRLDSTRPDTLLASNWLEQGCVYDKDQTIMSDAIATLLGDDLSSEYK-----NMA 510

Query: 298 XXXXXXXXXXXLDSYQWNKMPHACQM 221
                      L S  WN MP  CQM
Sbjct: 511 AGTSISSQAWGLGSCAWNNMPAVCQM 536


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