BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036124
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [...    65   1e-08
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu...    64   3e-08
ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Caps...    63   5e-08
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ...    63   5e-08
emb|CBI35789.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]      60   3e-07
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar...    60   3e-07
ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutr...    59   7e-07
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protei...    57   2e-06
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
          Length = 681

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = +3

Query: 144 HLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXXXX 323
           H QP+  Q   ++D+        SI NRSYW KKIHSLC  H +VD+A            
Sbjct: 26  HQQPQHHQQDGDQDQT-------SIDNRSYWTKKIHSLCTAHRNVDQALHLLDRLRLLGY 78

Query: 324 XPDFLNLASIIHSLC 368
            PD LNL+SI+H+LC
Sbjct: 79  RPDSLNLSSILHALC 93


>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
           gi|222869094|gb|EEF06225.1| hypothetical protein
           POPTR_0015s04490g [Populus trichocarpa]
          Length = 668

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/92 (39%), Positives = 47/92 (51%)
 Frame = +3

Query: 99  FRSLPSPLRFLTAQIHLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDV 278
           F+   SPL FL+      P++ +  +N  +  +      I NRSYW +KIH LC  H +V
Sbjct: 16  FKPKLSPLSFLSTH----PQNQEQALNHQQQSIC-----ITNRSYWTQKIHDLCTKHRNV 66

Query: 279 DEAXXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
           DEA             PD LNL+SIIH LC A
Sbjct: 67  DEALRLLDHLRLRGYLPDSLNLSSIIHGLCDA 98


>ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Capsella rubella]
           gi|482568192|gb|EOA32381.1| hypothetical protein
           CARUB_v10015648mg [Capsella rubella]
          Length = 687

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = +3

Query: 84  AQSQAFRSLPSPLRFLTAQIHLQPRSDQNPVNEDEADMVFEGE----SIANRSYWRKKIH 251
           A+   F     PL F +  + +    +    +E E D + E E    S+ +R+YWR++IH
Sbjct: 11  ARGNGFFFSIKPLSFSSTSVVVPDHFEAQIHSEGEDDAI-EAEDRRRSVTDRAYWRRRIH 69

Query: 252 SLCAVHGDVDEAXXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
           S+CAVH + DEA             PD LNL+S+IH+LC A
Sbjct: 70  SICAVHQNPDEALRIIDGLCLRGYRPDSLNLSSVIHALCDA 110


>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328941|gb|EFH59360.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/89 (39%), Positives = 47/89 (52%)
 Frame = +3

Query: 108 LPSPLRFLTAQIHLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEA 287
           L   L F +A I    +SD     +D  +      S+ NR+YWR++IHS+CAV  + DEA
Sbjct: 18  LSKSLSFSSASIL---KSDDVEGEDDAVEAEDRRRSVTNRAYWRRRIHSICAVRRNPDEA 74

Query: 288 XXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
                        PD LNL+S+IHSLC A
Sbjct: 75  LRVLDGLCLRGYRPDSLNLSSVIHSLCDA 103


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/89 (39%), Positives = 46/89 (51%)
 Frame = +3

Query: 108 LPSPLRFLTAQIHLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEA 287
           LPS    L        +S  N  +E+E     E ESI N+++W +KIH+LC    +VDEA
Sbjct: 257 LPSAANTLPLAFFFSAQSTPNQQHEEEK----EEESIINKAFWSRKIHNLCTRDRNVDEA 312

Query: 288 XXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
                        PD LNL+SIIH+LC A
Sbjct: 313 LRLLDLLRLRGYRPDSLNLSSIIHALCDA 341


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/89 (39%), Positives = 46/89 (51%)
 Frame = +3

Query: 108 LPSPLRFLTAQIHLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEA 287
           LPS    L        +S  N  +E+E     E ESI N+++W +KIH+LC    +VDEA
Sbjct: 25  LPSAANTLPLAFFFSAQSTPNQQHEEEK----EEESIINKAFWSRKIHNLCTRDRNVDEA 80

Query: 288 XXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
                        PD LNL+SIIH+LC A
Sbjct: 81  LRLLDLLRLRGYRPDSLNLSSIIHALCDA 109


>gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]
          Length = 714

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = +3

Query: 138 QIHLQPRSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXX 317
           Q H QP+   N    D +    E  S+ ++SYW K IH+LC  H +VDEA          
Sbjct: 38  QQHQQPKRQSNH-GPDNSFSALEQVSVDDKSYWTKTIHNLCTRHRNVDEALCLLDRLSLR 96

Query: 318 XXXPDFLNLASIIHSLC 368
              PD LNL+SI+H+LC
Sbjct: 97  GYRPDSLNLSSIVHALC 113


>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642514|gb|AEE76035.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 688

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +3

Query: 156 RSDQNPVNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXXXXXPDF 335
           +SD     +D  +      S+ +R+YWR++IHS+CAV  + DEA             PD 
Sbjct: 31  KSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDS 90

Query: 336 LNLASIIHSLCAA 374
           LNL+S+IHSLC A
Sbjct: 91  LNLSSVIHSLCDA 103


>ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutrema salsugineum]
           gi|557107810|gb|ESQ48117.1| hypothetical protein
           EUTSA_v10020183mg [Eutrema salsugineum]
          Length = 694

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
 Frame = +3

Query: 117 PLRFLTAQIHLQPRSD--QNPVNEDEADMVFEGE----SIANRSYWRKKIHSLCAVHGDV 278
           P+ F +A +    +SD  +  ++ ++ D   E E    ++ +R+YWR++IHS C V  + 
Sbjct: 26  PVYFSSASVSQLQKSDVVEARIHSEKEDDAIEAEDRRRNVTDRAYWRRRIHSSCTVRRNP 85

Query: 279 DEAXXXXXXXXXXXXXPDFLNLASIIHSLCAA 374
           DEA             PD LNL+S+IHSLC A
Sbjct: 86  DEALRILDGLCLRGYRPDSLNLSSVIHSLCDA 117


>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Solanum tuberosum]
          Length = 680

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = +3

Query: 201 FEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXXXXXPDFLNLASIIHSLC 368
           FEG+   +R+YW ++IH LCA+ G+VDEA             PD LNL+SI+H+LC
Sbjct: 39  FEGQEF-DRAYWTRRIHKLCAIDGNVDEALRLLDGLRLQGYHPDSLNLSSIVHALC 93


>gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 690

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +3

Query: 153 PRSDQNP--VNEDEADMVFEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXXXXX 326
           P+S  +P  V+   + +    + I N+ YW  KIH+LC  H +VDEA             
Sbjct: 28  PKSPTSPLAVHFSTSSLSHLQQPITNKPYWATKIHNLCTKHRNVDEAISLLDTLCLHGYR 87

Query: 327 PDFLNLASIIHSLC 368
           PD+LNL+SIIH+LC
Sbjct: 88  PDYLNLSSIIHALC 101


>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Solanum lycopersicum]
          Length = 676

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = +3

Query: 201 FEGESIANRSYWRKKIHSLCAVHGDVDEAXXXXXXXXXXXXXPDFLNLASIIHSLC 368
           FE E   +R+YW ++IH LCA+ GDVDEA             PD LNL+SI+H+LC
Sbjct: 39  FEVEEF-DRAYWTRRIHKLCAIDGDVDEALRLLDELRLQGYHPDSLNLSSIVHALC 93