BLASTX nr result

ID: Zingiber25_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00036101
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325671.2| hypothetical protein POPTR_0019s14520g [Popu...    62   6e-08
dbj|BAJ96230.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
ref|XP_006353417.1| PREDICTED: sorting nexin 2A-like [Solanum tu...    55   1e-05
ref|XP_004240886.1| PREDICTED: sorting nexin 2A-like [Solanum ly...    55   1e-05

>ref|XP_002325671.2| hypothetical protein POPTR_0019s14520g [Populus trichocarpa]
           gi|550317563|gb|EEF00053.2| hypothetical protein
           POPTR_0019s14520g [Populus trichocarpa]
          Length = 571

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = +3

Query: 51  NAASTASSSRSWVARRDGTSPGTVHAATSDYLTISVSDPEMVHEAANSLVTGSTTYVTYL 230
           N +S++ SS+S+   R   S  T   ++SD++ I+VS+P+   EAANSLV G  TYVTYL
Sbjct: 113 NRSSSSDSSQSFSISR---SLSTASNSSSDFMKITVSNPQKEQEAANSLVPGGNTYVTYL 169

Query: 231 ITTWIRADASDGDPTEXXXXXXXXXXXXLAARISEAF 341
           ITT  R +  D D TE            L+ R++E++
Sbjct: 170 ITT--RTNLPDFDRTEFSVRRRFRDVVTLSDRLAESY 204


>dbj|BAJ96230.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 532

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
 Frame = +3

Query: 30  RASS---DPHNAASTASSSRSWVARRDGTSPGTVHAATSDYLTISVSDPEMVHE-AANSL 197
           RASS   DP + A  A+SS    +     SP +  AATS+Y  I+VSDPE   E AA SL
Sbjct: 57  RASSSFVDPPSYADVAASSPRSASASSSASPRSARAATSEYSYIAVSDPETEAEAAATSL 116

Query: 198 VTGS-TTYVTYLITTWIRADASDGDPTEXXXXXXXXXXXXLAARISEAF 341
           V GS  TY++YL+T+     A  GD               LA R++E+F
Sbjct: 117 VPGSGPTYISYLVTS-----ARRGDHRRHSVRRRFRDFVTLADRLAESF 160


>ref|XP_006353417.1| PREDICTED: sorting nexin 2A-like [Solanum tuberosum]
          Length = 541

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +3

Query: 129 ATSDYLTISVSDPEMVHEAANSLVTGSTTYVTYLITTWIRADASDGDPTEXXXXXXXXXX 308
           ++ D+LTI+VSDP+   E +NSLV G T YVTYLITT  R +  + D TE          
Sbjct: 104 SSDDFLTITVSDPQKEQELSNSLVPGGTAYVTYLITT--RTNLPEFDGTEFSVRRRFRDV 161

Query: 309 XXLAARISEAF 341
             L+ R++E++
Sbjct: 162 VTLSDRLAESY 172


>ref|XP_004240886.1| PREDICTED: sorting nexin 2A-like [Solanum lycopersicum]
          Length = 541

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +3

Query: 129 ATSDYLTISVSDPEMVHEAANSLVTGSTTYVTYLITTWIRADASDGDPTEXXXXXXXXXX 308
           ++ D+LTI+VSDP+   E +NSLV G T YVTYLITT  R +  + D TE          
Sbjct: 104 SSDDFLTITVSDPQKEQELSNSLVPGGTAYVTYLITT--RTNLPEFDGTEFSVRRRFRDV 161

Query: 309 XXLAARISEAF 341
             L+ R++E++
Sbjct: 162 VTLSDRLAESY 172


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