BLASTX nr result

ID: Zingiber25_contig00035830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035830
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256...    61   1e-07
ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DD...    59   5e-07
ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citr...    59   7e-07
ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [S...    55   7e-06

>ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
           gi|297739347|emb|CBI29337.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
 Frame = +1

Query: 1   LPNVTLQQSNL----IPPLTSQPGSS--SGLPXXXXXXXXXXXXWPSAFNKRGLDVGFAD 162
           +PN TL+ + +     P    QPGSS  S +P              +      +  G + 
Sbjct: 385 IPNATLRPTLMTRPSFPDSGFQPGSSTFSSIPETTNNNADRSSQVTNN-TYSNMPSGLSM 443

Query: 163 QSRMSGNLSEQNSYPIKFQRLDDGTGA-FQRVS-NSAVNTASIKKHGTSTV-AMGQVTA- 330
           +  M+ + SE  ++P K  +LDDG  A F  V  N + ++AS    G S V  +G V+A 
Sbjct: 444 KKSMARDTSEPMNHPSKMVKLDDGRRAPFSTVGLNLSTSSASASASGPSQVLGIGSVSAN 503

Query: 331 ------DVVHSEKSMPQLL--PDVESALLQQVLSLTPEQL 426
                 +V H +K  PQL   P++ESALLQQVL+LTPEQL
Sbjct: 504 QISKAEEVQHMDKKAPQLQLPPEIESALLQQVLNLTPEQL 543


>ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DDB_G0280777-like [Citrus
           sinensis]
          Length = 553

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
 Frame = +1

Query: 142 LDVGFADQSRMSGNLSEQNSYPIKFQRLDDGTGAFQRVS----NSAVNTASIKKHGTSTV 309
           + +G A +     +  +  S+P K  + +DG+G    V     +  + +A  +  G   V
Sbjct: 425 MSMGLASKRSTVNDSLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLV 484

Query: 310 AMGQV--TADVVHSEKSMPQ--LLPDVESALLQQVLSLTPEQL 426
            + QV    +V +SEK +PQ  + PDVESALLQQVLSLTPEQL
Sbjct: 485 PVNQVPKVEEVQYSEKQIPQPQISPDVESALLQQVLSLTPEQL 527


>ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citrus clementina]
           gi|557536692|gb|ESR47810.1| hypothetical protein
           CICLE_v10000749mg [Citrus clementina]
          Length = 553

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
 Frame = +1

Query: 142 LDVGFADQSRMSGNLSEQNSYPIKFQRLDDGTGAFQRVS----NSAVNTASIKKHGTSTV 309
           + +G A +     +  +  S+P K  + +DG+G    V     +  + +A  +  G   V
Sbjct: 425 MSMGLASKRSTVNDPLDSISHPSKIVKTEDGSGTSFSVGALNVSKPIGSAPSQAFGAGLV 484

Query: 310 AMGQV--TADVVHSEKSMPQ--LLPDVESALLQQVLSLTPEQL 426
            + QV    +V +SEK +PQ  + PDVESALLQQVLSLTPEQL
Sbjct: 485 PVNQVPKVEEVQYSEKQIPQPQISPDVESALLQQVLSLTPEQL 527


>ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
           gi|241934940|gb|EES08085.1| hypothetical protein
           SORBIDRAFT_05g004860 [Sorghum bicolor]
          Length = 545

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
 Frame = +1

Query: 145 DVGFADQSRMSGNLSEQNSYPIKFQRLDDGTGAFQRVSNS-AVNTASIKKHGTSTVAMGQ 321
           ++  ADQ+    +L+E N +P K ++L+DGT     V++S AV TA ++  G S  + G 
Sbjct: 432 EIRVADQA---SHLTEFN-HPSKLRKLEDGTSVPGIVNSSHAVYTAPLQSVGPSGPS-GS 486

Query: 322 VTADVVHSEK--SMPQLLPDVESALLQQVLSLTPEQL 426
            +A  V  ++  +  QL PDVESALLQQVL LTPEQL
Sbjct: 487 YSAGAVSLQQPGNEGQLTPDVESALLQQVLQLTPEQL 523


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