BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035821
         (938 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650563.1| PREDICTED: DNA repair protein XRCC4-like [Or...   320   4e-85
ref|XP_003559906.1| PREDICTED: DNA repair protein XRCC4-like [Br...   318   1e-84
ref|XP_002466484.1| hypothetical protein SORBIDRAFT_01g008590 [S...   315   2e-83
ref|NP_001142226.1| uncharacterized protein LOC100274394 [Zea ma...   314   4e-83
ref|NP_001051220.1| Os03g0740800 [Oryza sativa Japonica Group] g...   313   5e-83
gb|EAZ28530.1| hypothetical protein OsJ_12511 [Oryza sativa Japo...   312   1e-82
ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Se...   311   3e-82
tpg|DAA51259.1| TPA: double strand break repair protein [Zea mays]    311   3e-82
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   310   7e-82
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              310   7e-82
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   308   2e-81
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   306   6e-81
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The...   306   1e-80
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   302   1e-79
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             299   1e-78
gb|EMS63806.1| DNA repair protein XRCC4 [Triticum urartu]             299   1e-78
gb|EMT16185.1| DNA repair protein XRCC4 [Aegilops tauschii]           298   2e-78
dbj|BAK03579.1| predicted protein [Hordeum vulgare subsp. vulgar...   298   2e-78
ref|XP_002315726.1| predicted protein [Populus trichocarpa]           298   2e-78
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   297   3e-78

>ref|XP_006650563.1| PREDICTED: DNA repair protein XRCC4-like [Oryza brachyantha]
          Length = 276

 Score =  320 bits (821), Expect = 4e-85
 Identities = 156/243 (64%), Positives = 196/243 (80%), Gaps = 4/243 (1%)
 Frame = -2

Query: 871 SASTRNTCLRLELPVEDPKSKD--AVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLR 698
           +A+ R++C +L + VEDPK+    AVFVKA W P+RF LA++DG  AW   A++AEVRLR
Sbjct: 6   AAAPRHSCAKLSVAVEDPKAVGGGAVFVKATWHPTRFSLAVTDGAGAWVAEASDAEVRLR 65

Query: 697 AEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPS 518
           AEQWD  V +Y+SL+E+YL FQQP S Y F DAGNG RRLSWTFEKQGTKLEWRWK +PS
Sbjct: 66  AEQWDQPVADYLSLAERYLAFQQPSSTYSFHDAGNGSRRLSWTFEKQGTKLEWRWKLQPS 125

Query: 517 SDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAV 338
            + ++  +EILDFLMDANIRLSEEVVR+ +SF+ LK E++KCL+QSERF+NEK+EFE A 
Sbjct: 126 PNTQQTIAEILDFLMDANIRLSEEVVRKTQSFDKLKQESEKCLQQSERFNNEKAEFEQAT 185

Query: 337 YNKFVAVLNSKKAKLRELRDKLSNLEATAKAPK--EEDDSTDKTESFDEASDRETLIKEE 164
           ++KFVAVLNSKKAKLR+L++KL+ LE+  KAPK  EED+STDKTE F+E SD+   I +E
Sbjct: 186 FSKFVAVLNSKKAKLRQLKNKLTELESAEKAPKEEEEDNSTDKTELFEEESDKNGSINDE 245

Query: 163 PDE 155
           P E
Sbjct: 246 PSE 248


>ref|XP_003559906.1| PREDICTED: DNA repair protein XRCC4-like [Brachypodium distachyon]
          Length = 276

 Score =  318 bits (816), Expect = 1e-84
 Identities = 152/242 (62%), Positives = 195/242 (80%), Gaps = 3/242 (1%)
 Frame = -2

Query: 871 SASTRNTCLRLELPVEDPKSKD--AVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLR 698
           +A+ R++C +L + VEDPK+    A+FVKA W P+RF LA++DG  AW   A+EAEVRLR
Sbjct: 5   AAAPRHSCAKLSVAVEDPKAAGGGAIFVKATWLPTRFSLAVTDGAGAWVADASEAEVRLR 64

Query: 697 AEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPS 518
           AEQWD  V++Y+SL+E+YL FQQP S Y F DAG G RRLSWTFE+QGTKLEWRWK +P+
Sbjct: 65  AEQWDQPVSDYLSLAERYLAFQQPSSTYSFHDAGKGNRRLSWTFERQGTKLEWRWKLQPA 124

Query: 517 SDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAV 338
              ++  +E+LDFLMDANIRLSEEVVR+ +SF+ LK EADKCL+QSERF+NEK+EFE A 
Sbjct: 125 PQTQQTIAEVLDFLMDANIRLSEEVVRKTQSFDKLKEEADKCLQQSERFNNEKAEFEEAT 184

Query: 337 YNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKE-EDDSTDKTESFDEASDRETLIKEEP 161
           + KFVAV+NSKKAKLR+L+DK S LE++ KAPKE E++STD+TE F+E SD++  I +EP
Sbjct: 185 FTKFVAVINSKKAKLRQLKDKFSALESSDKAPKEDEENSTDRTEPFEEGSDKDPSINDEP 244

Query: 160 DE 155
            E
Sbjct: 245 SE 246


>ref|XP_002466484.1| hypothetical protein SORBIDRAFT_01g008590 [Sorghum bicolor]
           gi|241920338|gb|EER93482.1| hypothetical protein
           SORBIDRAFT_01g008590 [Sorghum bicolor]
          Length = 283

 Score =  315 bits (807), Expect = 2e-83
 Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 9/247 (3%)
 Frame = -2

Query: 868 ASTRNTCLRLELPVEDPKSKDA----VFVKAAWFPSRFELAISDGLNAWTCHATEAEVRL 701
           A  R++C +L +PVEDPK+  A    VFVKA W PSRF LA++DG  AW   A++ EVRL
Sbjct: 8   APARHSCAKLSVPVEDPKAVAAGAGTVFVKATWLPSRFSLAVTDGAGAWVADASDHEVRL 67

Query: 700 RAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKP 521
           RAEQWD  VT+Y++L+E+YL FQQP S Y F DAG G RRLSWTFE+QGTKLEWRWK +P
Sbjct: 68  RAEQWDQPVTDYLALAERYLAFQQPDSTYSFHDAGKGNRRLSWTFERQGTKLEWRWKLQP 127

Query: 520 SSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESA 341
           S + ++  SEILDFLMDANIRLSEEVVR+ +SF+ LK EA+KCL+QSERF+NEK+EFE A
Sbjct: 128 SPNTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKTEFEQA 187

Query: 340 VYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKE-----EDDSTDKTESFDEASDRETL 176
            ++KFVAVLNSKKAKLR+LRDK+  LE+  K PKE     E++STD+TE F+  SD+E  
Sbjct: 188 TFSKFVAVLNSKKAKLRQLRDKVVELESAGKPPKEEVEQQEENSTDRTELFEGESDKEAS 247

Query: 175 IKEEPDE 155
           I +EP E
Sbjct: 248 INDEPSE 254


>ref|NP_001142226.1| uncharacterized protein LOC100274394 [Zea mays]
           gi|194707700|gb|ACF87934.1| unknown [Zea mays]
           gi|195612486|gb|ACG28073.1| double strand break repair
           protein [Zea mays]
          Length = 290

 Score =  314 bits (804), Expect = 4e-83
 Identities = 155/254 (61%), Positives = 194/254 (76%), Gaps = 13/254 (5%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDA----VFVKAAWFPSRFELAISDGLNAWTCHATEAEV 707
           ++A  R++C +L +PVEDPK+  A    VFVKA W PSRF LA++DG  AW   A++ EV
Sbjct: 6   SAAPARHSCAKLSVPVEDPKAVTAGGGTVFVKATWLPSRFSLAVTDGAGAWVADASDHEV 65

Query: 706 RLRAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKC 527
           RLRAEQWD  V +YI+L+E+YL FQQPGS Y F DAG GQRRL+WTFE+QGTKLEWRWK 
Sbjct: 66  RLRAEQWDQPVADYIALAERYLAFQQPGSTYSFHDAGKGQRRLAWTFERQGTKLEWRWKL 125

Query: 526 KPSSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFE 347
           +PS + ++  SEILDFLMDANIRLSEEVVR+ +SF+ LK EA+KCL+QSERF+NEK+EFE
Sbjct: 126 QPSPNTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFE 185

Query: 346 SAVYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEE---------DDSTDKTESFDEA 194
            A ++KFVAVLNSKKAKLR+LRDK+  LE+  K PKEE         ++STD+TE F+  
Sbjct: 186 QAAFSKFVAVLNSKKAKLRQLRDKVVELESAVKPPKEEAGQEQEQEQENSTDRTELFEAE 245

Query: 193 SDRETLIKEEPDEE 152
           SD+E   K+E   E
Sbjct: 246 SDKEASAKDEHSSE 259


>ref|NP_001051220.1| Os03g0740800 [Oryza sativa Japonica Group]
           gi|31126770|gb|AAP44689.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|40539032|gb|AAR87289.1|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|108710997|gb|ABF98792.1| double strand break repair
           protein, putative, expressed [Oryza sativa Japonica
           Group] gi|113549691|dbj|BAF13134.1| Os03g0740800 [Oryza
           sativa Japonica Group] gi|125545669|gb|EAY91808.1|
           hypothetical protein OsI_13450 [Oryza sativa Indica
           Group] gi|215701262|dbj|BAG92686.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 274

 Score =  313 bits (803), Expect = 5e-83
 Identities = 151/243 (62%), Positives = 196/243 (80%), Gaps = 3/243 (1%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKD--AVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRL 701
           ++A+ R++C +L + VEDPK+    AVFVKA W P+RF LA++DG  AW   A++AEVRL
Sbjct: 4   STAAPRHSCAKLSVAVEDPKAGGGGAVFVKATWHPTRFSLAVTDGGAAWVAQASDAEVRL 63

Query: 700 RAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKP 521
           RAEQWD  V +Y++L+E+YL FQQP S Y F DA NG RRLSWTFEKQGTKLEWRWK +P
Sbjct: 64  RAEQWDQPVADYLALAERYLAFQQPSSTYSFHDAANGNRRLSWTFEKQGTKLEWRWKLQP 123

Query: 520 SSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESA 341
           + + ++  +EILDFLMDANIRLSEEVVR+ +SF+ LK E++KCL+QSERF+ EK+EFE +
Sbjct: 124 APNTQQTIAEILDFLMDANIRLSEEVVRKTQSFDKLKQESEKCLQQSERFNIEKAEFEQS 183

Query: 340 VYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD-STDKTESFDEASDRETLIKEE 164
            ++KFVAVLNSKKAKLR+L+DKL+  E+  KAPKEED+ STDKTE F+EASD++  + +E
Sbjct: 184 TFSKFVAVLNSKKAKLRQLKDKLTEFESADKAPKEEDENSTDKTELFEEASDKDASVNDE 243

Query: 163 PDE 155
           P E
Sbjct: 244 PSE 246


>gb|EAZ28530.1| hypothetical protein OsJ_12511 [Oryza sativa Japonica Group]
          Length = 274

 Score =  312 bits (799), Expect = 1e-82
 Identities = 150/243 (61%), Positives = 195/243 (80%), Gaps = 3/243 (1%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKD--AVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRL 701
           ++A+ R++C +L + VEDPK+    AVFVKA W P+RF L ++DG  AW   A++AEVRL
Sbjct: 4   STAAPRHSCAKLSVAVEDPKAGGGGAVFVKATWHPTRFSLGVTDGGAAWVAQASDAEVRL 63

Query: 700 RAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKP 521
           RAEQWD  V +Y++L+E+YL FQQP S Y F DA NG RRLSWTFEKQGTKLEWRWK +P
Sbjct: 64  RAEQWDQPVADYLALAERYLAFQQPSSTYSFHDAANGNRRLSWTFEKQGTKLEWRWKLQP 123

Query: 520 SSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESA 341
           + + ++  +EILDFLMDANIRLSEEVVR+ +SF+ LK E++KCL+QSERF+ EK+EFE +
Sbjct: 124 APNTQQTIAEILDFLMDANIRLSEEVVRKTQSFDKLKQESEKCLQQSERFNIEKAEFEQS 183

Query: 340 VYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD-STDKTESFDEASDRETLIKEE 164
            ++KFVAVLNSKKAKLR+L+DKL+  E+  KAPKEED+ STDKTE F+EASD++  + +E
Sbjct: 184 TFSKFVAVLNSKKAKLRQLKDKLTEFESADKAPKEEDENSTDKTELFEEASDKDASVNDE 243

Query: 163 PDE 155
           P E
Sbjct: 244 PSE 246


>ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Setaria italica]
          Length = 281

 Score =  311 bits (796), Expect = 3e-82
 Identities = 150/246 (60%), Positives = 192/246 (78%), Gaps = 7/246 (2%)
 Frame = -2

Query: 871 SASTRNTCLRLELPVEDPKSK-----DAVFVKAAWFPSRFELAISDGLNAWTCHATEAEV 707
           +A+ R++C +L + VEDPK+       AVFV+A W P+RF LA++DG  AW   A++AEV
Sbjct: 7   AAAPRHSCAKLSVAVEDPKAAAAAGGGAVFVRATWLPTRFSLAVTDGAGAWVADASDAEV 66

Query: 706 RLRAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKC 527
           RLRAEQWD  V EY++L+++YL F QP S Y F DAG G RRLSWTFEKQGTKLEWRWK 
Sbjct: 67  RLRAEQWDQPVAEYLALADRYLAFHQPDSTYSFHDAGKGNRRLSWTFEKQGTKLEWRWKL 126

Query: 526 KPSSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFE 347
           +PS + ++  SEILDFLMDANIRLSEEVVR+ +SF+ LK EA+KCL+QSERF+NEK+EFE
Sbjct: 127 QPSPNAQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFE 186

Query: 346 SAVYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD--STDKTESFDEASDRETLI 173
            A ++KFVAVLNSKK KLR+LRDK++ LE+  K PKEE++  STD+TE F+  SD+E  +
Sbjct: 187 QATFSKFVAVLNSKKTKLRQLRDKVAELESADKPPKEEEEENSTDRTEQFEGGSDKEASV 246

Query: 172 KEEPDE 155
            +EP E
Sbjct: 247 NDEPSE 252


>tpg|DAA51259.1| TPA: double strand break repair protein [Zea mays]
          Length = 290

 Score =  311 bits (796), Expect = 3e-82
 Identities = 154/254 (60%), Positives = 193/254 (75%), Gaps = 13/254 (5%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDA----VFVKAAWFPSRFELAISDGLNAWTCHATEAEV 707
           ++A  R++C +L +PVEDPK+  A    VFVKA W PSRF LA++DG  AW   A++ EV
Sbjct: 6   SAAPARHSCAKLSVPVEDPKAVTAGGGTVFVKATWLPSRFSLAVTDGAGAWVADASDHEV 65

Query: 706 RLRAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKC 527
           RLRAEQWD  V +YI+L+E+YL FQQPGS Y F DAG GQRRL+WTFE+QGTKLEWRWK 
Sbjct: 66  RLRAEQWDQPVADYIALAERYLAFQQPGSTYSFHDAGKGQRRLAWTFERQGTKLEWRWKL 125

Query: 526 KPSSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFE 347
           +PS + ++  SEILDFLMDANIRLSEEVVR+ +SF+ LK EA+KCL+QSERF+NEK+EFE
Sbjct: 126 QPSPNTQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKAEFE 185

Query: 346 SAVYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPK---------EEDDSTDKTESFDEA 194
            A ++KFVAVLNSKKAKLR+LRDK+  LE   K PK         EE++STD+TE F+  
Sbjct: 186 QAAFSKFVAVLNSKKAKLRQLRDKVVELEPAVKPPKEEAGQEQEEEEENSTDRTELFEGE 245

Query: 193 SDRETLIKEEPDEE 152
           +D+E   K+E   E
Sbjct: 246 NDKEASAKDEHSGE 259


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  310 bits (793), Expect = 7e-82
 Identities = 147/231 (63%), Positives = 188/231 (81%)
 Frame = -2

Query: 859 RNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQWDL 680
           R++CL+L++P       + +F+KA WFPS F L+I+DGL+AW C+A+E EVR RA QWD 
Sbjct: 6   RHSCLKLQIP----NQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQ 61

Query: 679 SVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNKKM 500
            V++YI+L+E++LGFQQPGS YGF DAG+G RRLSWTFEK+GTKLEWRWKC  S D++  
Sbjct: 62  PVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRST 121

Query: 499 TSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKFVA 320
           T+ +LDFLM+ANIRLSEEVV + +SFE LK EA+KCL QSE+F+NEK+EFESA+Y KF+ 
Sbjct: 122 TAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLG 181

Query: 319 VLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKE 167
           VLNSKKAKLRELRD++S  E T K P+EED+STDKT SFD+ SD E + +E
Sbjct: 182 VLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEE 232


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  310 bits (793), Expect = 7e-82
 Identities = 147/231 (63%), Positives = 188/231 (81%)
 Frame = -2

Query: 859 RNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQWDL 680
           R++CL+L++P       + +F+KA WFPS F L+I+DGL+AW C+A+E EVR RA QWD 
Sbjct: 6   RHSCLKLQIP----NQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQ 61

Query: 679 SVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNKKM 500
            V++YI+L+E++LGFQQPGS YGF DAG+G RRLSWTFEK+GTKLEWRWKC  S D++  
Sbjct: 62  PVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRST 121

Query: 499 TSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKFVA 320
           T+ +LDFLM+ANIRLSEEVV + +SFE LK EA+KCL QSE+F+NEK+EFESA+Y KF+ 
Sbjct: 122 TAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLG 181

Query: 319 VLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKE 167
           VLNSKKAKLRELRD++S  E T K P+EED+STDKT SFD+ SD E + +E
Sbjct: 182 VLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEE 232


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  308 bits (789), Expect = 2e-81
 Identities = 152/239 (63%), Positives = 187/239 (78%), Gaps = 1/239 (0%)
 Frame = -2

Query: 865 STRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQW 686
           + R+TCL+LE+        + +FVK  WF S F L+I+DGLNAW C+ATE +V+ RA QW
Sbjct: 12  TARHTCLKLEIT-------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQW 64

Query: 685 DLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNK 506
           D  V+EYI+L+E YLGFQQPGS Y F DAG+  +RLSWTFEK+GTKLEWRWKC+PS DNK
Sbjct: 65  DQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNK 124

Query: 505 KMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKF 326
             T+ ILDFLMDANIRLSEEVV++  SFE LK EADKCL QSERF+ EK+EFES++Y KF
Sbjct: 125 MTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKF 184

Query: 325 VAVLNSKKAKLRELRDKLSNLEATAKAP-KEEDDSTDKTESFDEASDRETLIKEEPDEE 152
           +AVLNSKK KLR+LRD+LS  EA+ K P +EE++STDKTESF+E S      +EEP E+
Sbjct: 185 LAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEK 243


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  306 bits (785), Expect = 6e-81
 Identities = 152/253 (60%), Positives = 192/253 (75%), Gaps = 1/253 (0%)
 Frame = -2

Query: 877 VASASTRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLR 698
           + SAS ++TCL+L +      +K+ +FVK  WF S F+L I+DGL +WTCHA+E EV  R
Sbjct: 1   MGSASPKHTCLKLVI-----SNKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEER 55

Query: 697 AEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPS 518
           A QWD  V+EYI L+E+YLGFQQPGS YGF+DAG G +RLSWTFEK+GTKLEWRWKC+PS
Sbjct: 56  ASQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPS 115

Query: 517 SDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAV 338
           S++KK T++ILDFLMDANIRLS+EVV +  SFE +K EA+KCL QSE+ S EK EFESA+
Sbjct: 116 SNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAI 175

Query: 337 YNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEED-DSTDKTESFDEASDRETLIKEEP 161
           Y KF+ VLNSKK KLRELRDKLS      + P EED  STD+T++FDE SD E +  EE 
Sbjct: 176 YAKFLGVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEE-MSGEEV 234

Query: 160 DEE*PSLYTRNDN 122
           ++E     ++ D+
Sbjct: 235 EKEDVGTSSKKDD 247


>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  306 bits (783), Expect = 1e-80
 Identities = 152/240 (63%), Positives = 189/240 (78%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRA 695
           +S++TR+TCL+LE+P  +P     +FVK  WF + F+++I+DGL+AW C+ATE EV+ RA
Sbjct: 5   SSSTTRHTCLKLEIPSTEP-----IFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 694 EQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSS 515
            QWD  VTEYI L+E+YLGFQQ GS Y F DAG+  +RLSW FEK+GTKLEWRWK +PS 
Sbjct: 60  AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 514 DNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVY 335
           D++K+T  ILDFLMDANIRLSEEV R+ +SFE LK EA+KCLEQSER +NEK EFES +Y
Sbjct: 120 DSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIY 179

Query: 334 NKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKEEPDE 155
            KF+ VLNSKKAKLRELRD+LS  E T KA  EE+DSTDKTES+   SD E   +EEP++
Sbjct: 180 AKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTESYHTGSDAEG-GEEEPEK 238


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  302 bits (774), Expect = 1e-79
 Identities = 149/234 (63%), Positives = 184/234 (78%)
 Frame = -2

Query: 862 TRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQWD 683
           TR+TCL+LE+      + D +FVK  WF + F+L+I+DGLN W C+A+E +V+ RA QWD
Sbjct: 3   TRHTCLKLEIS----DATDPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWD 58

Query: 682 LSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNKK 503
             VTEYI L+E+YLGFQQPGS YGF DA +G +RLSWTFEK+GTKLEWRWKC P+ ++KK
Sbjct: 59  QPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKK 118

Query: 502 MTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKFV 323
           +T+ ILDFLMDANIRLS+EVV + +SFE LK EA+KCL QSERF+NEK EFESA+Y KF+
Sbjct: 119 VTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFL 178

Query: 322 AVLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKEEP 161
            VLNSKK+KLRELRDKLS         +EE+ STDKTESFDE SD +   +EEP
Sbjct: 179 GVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSD-DDKSEEEP 231


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  299 bits (765), Expect = 1e-78
 Identities = 145/226 (64%), Positives = 177/226 (78%)
 Frame = -2

Query: 865 STRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQW 686
           S R+TCL+LE     PK  D +FV A WFPS F L+++DG +AW CHA+E EVR RA QW
Sbjct: 4   SKRHTCLKLE-----PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAAQW 58

Query: 685 DLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNK 506
           D  V EY++L+E+YLGFQQP S Y F DAG+G +RLSWTFEK+GTKL+WRWKC+P+ D+K
Sbjct: 59  DQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPDSK 118

Query: 505 KMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKF 326
           K T+E LDFLMDANIRLSEEVV +++SFE LK EA+KCLEQSE+ SNEK EFES +Y KF
Sbjct: 119 KTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYAKF 178

Query: 325 VAVLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASD 188
           + VLNSKKAKLRELR +L   +  A    +E+ STDKTESFD+ SD
Sbjct: 179 LGVLNSKKAKLRELRAQLEKNDPAAGKLPQEEGSTDKTESFDDGSD 224


>gb|EMS63806.1| DNA repair protein XRCC4 [Triticum urartu]
          Length = 279

 Score =  299 bits (765), Expect = 1e-78
 Identities = 144/246 (58%), Positives = 193/246 (78%), Gaps = 6/246 (2%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDA--VFVKAAWFPSRFELAISDGLNAWTCHATEAEVRL 701
           A+A+ R++C +L + VEDPK+     +FVKA W P+RF LA++DG  AW   A++AEVRL
Sbjct: 4   AAAAPRHSCAKLSVAVEDPKAPGGGGIFVKATWLPTRFSLAVTDGAGAWVADASDAEVRL 63

Query: 700 RAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKP 521
           RAEQWD  V+EY++L+E+YL F QP S Y F +AG G RRLSWTFEKQGTKLEWRWK +P
Sbjct: 64  RAEQWDQPVSEYLALAERYLAFHQPSSTYSFHEAGAG-RRLSWTFEKQGTKLEWRWKLQP 122

Query: 520 SSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESA 341
           ++  ++  +E+LDFLMDANIRLSEEVVR+ +SFE +K EA+ CL+QSERF+ EK+EFE A
Sbjct: 123 AAHPQQTIAEVLDFLMDANIRLSEEVVRKTQSFEKVKQEAENCLQQSERFNTEKAEFEQA 182

Query: 340 VYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD----STDKTESFDEASDRETLI 173
            + KFVAVLNSKKAKLR+L+D+++ LE+T KAPKEE++    STD+TE  ++ SD++  +
Sbjct: 183 SFTKFVAVLNSKKAKLRQLKDRIAALESTEKAPKEEEEEEGHSTDRTEPIEDGSDKDHSV 242

Query: 172 KEEPDE 155
            +EP E
Sbjct: 243 NDEPSE 248


>gb|EMT16185.1| DNA repair protein XRCC4 [Aegilops tauschii]
          Length = 280

 Score =  298 bits (763), Expect = 2e-78
 Identities = 145/245 (59%), Positives = 191/245 (77%), Gaps = 5/245 (2%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDA-VFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLR 698
           A+A+ R++C +L + VEDPK+    VFVKA W P+RF LA++DG  AW   A++AEVRLR
Sbjct: 5   AAAAPRHSCAKLSVAVEDPKAPGGGVFVKATWLPTRFSLAVTDGAGAWVADASDAEVRLR 64

Query: 697 AEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPS 518
           AEQWD  V+EY++L+E+YL F QP S Y F +AG G RRLSWTFEKQGTKLEWRWK +P+
Sbjct: 65  AEQWDQPVSEYLALAERYLAFHQPSSTYSFHEAGAG-RRLSWTFEKQGTKLEWRWKLQPA 123

Query: 517 SDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAV 338
              ++  +E+LDFLMDANIRLSEEVVR+ +SFE LK EA+ CL+QSERF+ EK+EFE A 
Sbjct: 124 PHPQQTIAEVLDFLMDANIRLSEEVVRKTQSFEKLKQEAENCLQQSERFNTEKAEFEQAS 183

Query: 337 YNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD----STDKTESFDEASDRETLIK 170
           + KFVAVLNSKK+KLR+L+D+++ LE+  KAPKEE++    STD+TE  +E SD++  + 
Sbjct: 184 FTKFVAVLNSKKSKLRQLKDRIAALESADKAPKEEEEEEGHSTDRTEPIEEGSDKDHCVN 243

Query: 169 EEPDE 155
           +EP E
Sbjct: 244 DEPSE 248


>dbj|BAK03579.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532976|dbj|BAJ89333.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 280

 Score =  298 bits (763), Expect = 2e-78
 Identities = 145/246 (58%), Positives = 191/246 (77%), Gaps = 6/246 (2%)
 Frame = -2

Query: 874 ASASTRNTCLRLELPVEDPKSKDA--VFVKAAWFPSRFELAISDGLNAWTCHATEAEVRL 701
           A+A+ R++C +L + VEDPK+     +FVKA W P+RF LA++DG  AW   A++AEVRL
Sbjct: 4   AAAAPRHSCAKLSVAVEDPKAPGGGGIFVKATWLPTRFSLAVTDGAGAWVADASDAEVRL 63

Query: 700 RAEQWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKP 521
           RAEQWD  V+EY++L+E+YL F QP S Y F +AG G RRLSWTFEKQGTKLEWRWK +P
Sbjct: 64  RAEQWDQPVSEYLALAERYLAFHQPSSTYSFHEAGAG-RRLSWTFEKQGTKLEWRWKLQP 122

Query: 520 SSDNKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESA 341
           +   ++  +E+LDFLMDANIRLSEEVVR+ +SFE LK EA+ CL+QS+RF+NEK+EFE A
Sbjct: 123 APHPQQTIAEVLDFLMDANIRLSEEVVRKTQSFEKLKQEAENCLQQSDRFNNEKAEFEQA 182

Query: 340 VYNKFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDD----STDKTESFDEASDRETLI 173
            + KFVAVLNSKKAKLR+L+DK++ LE+  KAPKEE++    STD+TE  +E SD++  +
Sbjct: 183 SFTKFVAVLNSKKAKLRQLKDKIAALESADKAPKEEEEEEGNSTDRTEPIEEGSDKDQSV 242

Query: 172 KEEPDE 155
            + P E
Sbjct: 243 NDGPSE 248


>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
          Length = 233

 Score =  298 bits (763), Expect = 2e-78
 Identities = 149/240 (62%), Positives = 185/240 (77%)
 Frame = -2

Query: 871 SASTRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAE 692
           S   R+TCL+LE+P       + +F+K  WFP  F L+I+DGLN+W C+ATE EVR RA 
Sbjct: 3   STMARHTCLKLEIP-------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAA 55

Query: 691 QWDLSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSD 512
           QWD  V+ YI L+E++LGFQ PGS Y F DAG G +RLSWTFEK+GTKLEWRWKC+PS D
Sbjct: 56  QWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPD 115

Query: 511 NKKMTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYN 332
            KK T+ ILDFLMDANIRLSEEVVR+ +SFE LK EA+KCL QSE+F+++K EFE+AVY 
Sbjct: 116 TKKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYA 175

Query: 331 KFVAVLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKEEPDEE 152
           KF+ VLNSKK KLRELRD+LS  E + ++ +EE+DS DKTESFD  SD E  + E+P E+
Sbjct: 176 KFLGVLNSKKRKLRELRDQLSKKEISGESAQEEEDS-DKTESFDRGSDDEKSV-EKPREK 233


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  297 bits (761), Expect = 3e-78
 Identities = 146/237 (61%), Positives = 184/237 (77%)
 Frame = -2

Query: 862 TRNTCLRLELPVEDPKSKDAVFVKAAWFPSRFELAISDGLNAWTCHATEAEVRLRAEQWD 683
           TR+TCL+LE+P     + D +F K  WF + F+L+I+DGLNAW C+A+E +V+ RA QWD
Sbjct: 3   TRHTCLKLEIP----DATDPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWD 58

Query: 682 LSVTEYISLSEQYLGFQQPGSKYGFEDAGNGQRRLSWTFEKQGTKLEWRWKCKPSSDNKK 503
             VTEYI L+E+YLGFQQPGS YGF DA +G +RLSWTFEK+GTKLEWRWK  P+ ++KK
Sbjct: 59  QPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKK 118

Query: 502 MTSEILDFLMDANIRLSEEVVRRARSFEILKSEADKCLEQSERFSNEKSEFESAVYNKFV 323
           +T+ ILDFLMDANIRLS+EVV + +SFE LK E  KCL QSERF NEK EFESA+Y+KF+
Sbjct: 119 VTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFL 178

Query: 322 AVLNSKKAKLRELRDKLSNLEATAKAPKEEDDSTDKTESFDEASDRETLIKEEPDEE 152
            VLNSKK+KLRELRDKLS         +EE++STDKTESFD  SD +   +E+P ++
Sbjct: 179 GVLNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSD-DDKSEEQPTKD 234