BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035740
         (719 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [A...    96   2e-17
gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protei...    90   8e-16
gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus pe...    89   1e-15
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...    89   1e-15
ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citr...    86   2e-14
ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containi...    85   3e-14
gb|ESW10855.1| hypothetical protein PHAVU_009G243700g [Phaseolus...    85   3e-14
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...    85   3e-14
ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Popu...    85   3e-14
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]    85   3e-14
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi...    83   8e-14
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...    82   2e-13
ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Popu...    81   3e-13
ref|XP_004966603.1| PREDICTED: pentatricopeptide repeat-containi...    80   5e-13
gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis]      80   7e-13
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ...    79   2e-12
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...    78   2e-12
ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutr...    78   3e-12
ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containi...    77   4e-12

>ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [Amborella trichopoda]
           gi|548859701|gb|ERN17347.1| hypothetical protein
           AMTR_s00037p00138240 [Amborella trichopoda]
          Length = 649

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
 Frame = -1

Query: 599 DSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXXXXXRSFP 420
           + PP+A+EIF+ A   G Y QGD+T+ +L + YAD    D   +              F 
Sbjct: 50  EEPPVAEEIFRGAPTMGPYKQGDSTFFSLVQTYADSG--DFVLLNQVFTRMKRENRV-FT 106

Query: 419 ERVFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQPGDHQNHRLA 243
           E++F+ +++A G +G   +A+++F  +   + C P++ SFN+ L+ L+     H     A
Sbjct: 107 EKLFILVIKAHGRAGSYESAIKVFDTMRDRYNCPPTIRSFNSVLNVLVQSCNFHG----A 162

Query: 242 VPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVI 63
           + FY   +R    +APN          LC+ G +  AV + R +  +G  PD +SYST+I
Sbjct: 163 LAFYHRVLRIG-GLAPNSLTFNLIIKSLCKLGSIDQAVEMFRKMNSKGCPPDLFSYSTLI 221

Query: 62  AAFAAAGRLTDAHALLEEM 6
                  R+ +A ALL+EM
Sbjct: 222 DGLCKEDRIEEAIALLDEM 240


>gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 636

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
 Frame = -1

Query: 650 SSVPTAGCI--YESEGDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDL 477
           +S+ +  C+  + S+   +   PL+D++F  A +SG +  GD+T  +L   YA +   D 
Sbjct: 14  NSICSCRCLSSFPSKVSRAQPTPLSDQLFNSAPQSGSFRLGDSTCYSLIHHYAHK--VDF 71

Query: 476 PAIGXXXXXXXXXXXRSFPERVFVPMLRALGASGRPLAAVRLFLRLP-TFGCTPSVISFN 300
            ++              F E+ F+ + +A G +  P  AV LF R+P  F C P+V SFN
Sbjct: 72  ASLHDVLCRMKLQNRV-FIEKYFLLIFKAYGRAHLPEKAVDLFHRMPHEFHCKPTVKSFN 130

Query: 299 TALSALLSQPGDHQNHRLAVPFYSSAIR-RRPSIAPNXXXXXXXXXXLCRSGDLSGAVRL 123
           + L+ ++ +   H+    A  FY+ ++  +  +I+PN          +C+ G +  A+ +
Sbjct: 131 SVLNVIIQEGFYHR----AFDFYNCSVSAKNTNISPNVLTFNLLLKAMCKLGWVDRAIEV 186

Query: 122 LRHIPLRGLRPDSYSYSTVIAAFAAAGRLTDAHALLEEM 6
            R +PLR   PD Y+Y T++       R+ +A +LL+EM
Sbjct: 187 FREMPLRKCAPDVYTYCTLMDGLCKEDRIDEAVSLLDEM 225


>gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus persica]
          Length = 664

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
 Frame = -1

Query: 593 PPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXXXXXRSFPER 414
           PP+++EIF+   + G Y  GD+T+ +L   YA+    D  ++              F E+
Sbjct: 65  PPISNEIFKKGTKLGSYKSGDSTFYSLIENYANLG--DFRSLEQVLDRMKRERRV-FIEQ 121

Query: 413 VFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQPGDHQNHRLAVP 237
            F+ M RA G +  P  AV LF R+   F C  +V SFN+ L+ ++ +   H +H  A+ 
Sbjct: 122 SFILMFRAYGKAHLPNKAVELFYRMVDEFQCRRTVKSFNSVLNVIIQE--GHYSH--ALE 177

Query: 236 FYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVIA 60
           FYS  +     +I+PN          +C+ G +  AV++ R +PLR   PD ++YST++ 
Sbjct: 178 FYSHVVGTTGMNISPNVLSFNLIIKSMCKLGLVDRAVQVFREMPLRNCTPDVFTYSTLMD 237

Query: 59  AFAAAGRLTDAHALLEEM 6
                 R+ +A  LL+EM
Sbjct: 238 GLCKEKRIDEAVFLLDEM 255


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
 Frame = -1

Query: 611 GDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYA-DRDPPDLPAIGXXXXXXXXXX 435
           G   +S P++D+IF    + G +  GD+T+ +L   YA   D   L  +           
Sbjct: 46  GSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKV----LNRMRLE 101

Query: 434 XRSFPERVFVPMLRALGASGRPLAAVRLFLRLP-TFGCTPSVISFNTALSALLSQPGDHQ 258
            R F E+ F  M +A G +  P  A+ LF R+   F C P+V SFN+ L+ ++ Q G H 
Sbjct: 102 NRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVII-QAGFHD 160

Query: 257 NHRLAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSY 81
               A+ FY+  +  +  +I PN          +C+ G +  A+ L R +P+R   PD+Y
Sbjct: 161 R---ALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAY 217

Query: 80  SYSTVIAAFAAAGRLTDAHALLEEM 6
           +Y T++       R+ +A +LL+EM
Sbjct: 218 TYCTLMDGLCKVDRIDEAVSLLDEM 242


>ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citrus clementina]
           gi|557551210|gb|ESR61839.1| hypothetical protein
           CICLE_v10014519mg [Citrus clementina]
          Length = 664

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
 Frame = -1

Query: 620 ESEGDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXX 441
           E +G+     P +DE+F    + G Y  GD+T+ +L + YA+    D  ++         
Sbjct: 54  EPQGNAKSEQPFSDEVFNSTPKLGSYQLGDSTFYSLIQHYANSG--DFKSLEMVLCRMRR 111

Query: 440 XXXRSFPERVFVPMLRALGASGRPLAAVRLF-LRLPTFGCTPSVISFNTALSALLSQPGD 264
               +  E+ F+ + +A G +     AVRLF   +  F C  +V SFN+ L+ ++ +   
Sbjct: 112 EKRVAL-EKSFIFIFKAYGKAHLVEEAVRLFHTMVDEFQCKRTVKSFNSVLNVIIQEGLY 170

Query: 263 HQNHRLAVPFYSSAIR-RRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPD 87
           H+    A+ FY+  +  +  +I PN          +CR G +  A+ L R +P+R   PD
Sbjct: 171 HR----ALEFYNHIVNAKHMNILPNTLTFNLVIKAVCRLGLVDNAIELFREMPVRNCEPD 226

Query: 86  SYSYSTVIAAFAAAGRLTDAHALLEEM 6
            Y+Y T++       RL +A  LL+EM
Sbjct: 227 IYTYCTLMDGLCKENRLDEAVLLLDEM 253


>ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Citrus sinensis]
          Length = 664

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
 Frame = -1

Query: 620 ESEGDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXX 441
           E +G+     P +DEIF    + G Y  GD+T+ +L + YA+    D  ++         
Sbjct: 54  EPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSG--DFKSLEMVLYRMRR 111

Query: 440 XXXRSFPERVFVPMLRALGASGRPLAAVRLF-LRLPTFGCTPSVISFNTALSALLSQPGD 264
                  E+ F+ + +A G +     A+RLF   +  F C  +V SFN+ L+ ++ +   
Sbjct: 112 EKRVVL-EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170

Query: 263 HQNHRLAVPFYSSAIR-RRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPD 87
           H+    A+ FY+  +  +  +I PN          +CR G +  A++L R +P+R   PD
Sbjct: 171 HR----ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226

Query: 86  SYSYSTVIAAFAAAGRLTDAHALLEEM 6
            Y+Y T++       RL +A  LL+EM
Sbjct: 227 IYTYCTLMDGLCKENRLDEAVLLLDEM 253


>gb|ESW10855.1| hypothetical protein PHAVU_009G243700g [Phaseolus vulgaris]
          Length = 645

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
 Frame = -1

Query: 593 PPLADEIFQDAQRSGGYTQGDATYLALARAYADR-DPPDLPAIGXXXXXXXXXXXRSFPE 417
           P  + EIF+   + G Y  GD ++ +L + +A   D   L  +            R F E
Sbjct: 44  PHPSAEIFKSGTKMGSYKLGDLSFYSLIQNHASTLDFGSLEEV----LQQMKRERRVFVE 99

Query: 416 RVFVPMLRALGASGRPLAAVRLFLRLP-TFGCTPSVISFNTALSALLSQPGDHQNHRLAV 240
           R F+ M +A G +  P  AV LFLR+   F C  +V SFN+ LS ++ +   ++    A+
Sbjct: 100 RNFIVMFKAYGKAHLPEKAVDLFLRMGGEFQCKQTVKSFNSVLSVVIQEGLFNR----AL 155

Query: 239 PFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVI 63
             YS  +  +  +I PN          +CR G +  AV + R IPLR   PD+Y+YST++
Sbjct: 156 ELYSHVVASKSFNIHPNALTFNLLIKAMCRLGLVDQAVEVFREIPLRNCAPDAYTYSTLM 215

Query: 62  AAFAAAGRLTDAHALLEEM 6
                 GR+ +A +LL+EM
Sbjct: 216 HGLCQEGRIDEAVSLLDEM 234


>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 ERVFVPMLRALGASGRPLAAVRLFLRLPTFGCTPSVISFNTALSALLSQPGDHQNHRL-A 243
           E +F+ ++R  G +GRP  A+R FLR+P+FG  PSV SFNT L+ L+      QN R   
Sbjct: 170 ENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLV------QNKRFDL 223

Query: 242 VPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVI 63
           V       R++  I PN          LC+  D+  A+R+L  +P  G  P+  +Y+T++
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283

Query: 62  AAFAAAGRLTDAHALLEEML 3
             + + G +  A  +  E+L
Sbjct: 284 GGYVSKGDMVGARRVFGEIL 303


>ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Populus trichocarpa]
           gi|222845175|gb|EEE82722.1| hypothetical protein
           POPTR_0001s12190g [Populus trichocarpa]
          Length = 670

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
 Frame = -1

Query: 620 ESEGDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXX 441
           + E      PP++D+IF+   + G Y  GD+T+ +L   YA+    D  ++         
Sbjct: 61  DQENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLG--DFKSLEKVLDRMKC 118

Query: 440 XXXRSFPERVFVPMLRALGASGRPLAAVRLFLRLPT-FGCTPSVISFNTALSALLSQPGD 264
                F E+ F+ + +A G +  P  AV LF R+   F C  +  SFN+ L+ ++ +   
Sbjct: 119 EKRVIF-EKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLF 177

Query: 263 HQNHRLAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPD 87
           H+    A+ FY+  I  +  SI+PN          +C+ G +  A+++ R + +R   PD
Sbjct: 178 HR----ALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPD 233

Query: 86  SYSYSTVIAAFAAAGRLTDAHALLEEM 6
            Y+Y T++     A R+ +A +LL+EM
Sbjct: 234 VYTYCTLMDGLCKADRIDEAVSLLDEM 260


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 ERVFVPMLRALGASGRPLAAVRLFLRLPTFGCTPSVISFNTALSALLSQPGDHQNHRL-A 243
           E +F+ ++R  G +GRP  A+R FLR+P+FG  PSV SFNT L+ L+      QN R   
Sbjct: 170 ENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLV------QNKRFDL 223

Query: 242 VPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVI 63
           V       R++  I PN          LC+  D+  A+R+L  +P  G  P+  +Y+T++
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283

Query: 62  AAFAAAGRLTDAHALLEEML 3
             + + G +  A  +  E+L
Sbjct: 284 GGYVSKGDMVGARRVFGEIL 303


>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Fragaria vesca subsp. vesca]
          Length = 647

 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
 Frame = -1

Query: 611 GDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXXXXX 432
           G+    PP+++EIF+     G Y  GD+T+ +L   YA     D  ++            
Sbjct: 40  GNEEPDPPISEEIFRKGPNFGAYKSGDSTFYSLIENYASLG--DFGSLEKVLDRMKRERR 97

Query: 431 RSFPERVFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQPGDHQN 255
             F E  F+ + RA G +  P  AV LF R+   F C  +V SFN+ L+ ++ +   H  
Sbjct: 98  V-FVEGSFIAVFRAFGKAHLPNQAVDLFHRMVDEFQCRRTVKSFNSVLNVIVQE--GHYA 154

Query: 254 HRLAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYS 78
           H  A+ FY   +  R  +I+PN          LCR G +  AV   R +P+R   PD ++
Sbjct: 155 H--ALEFYDHVVGDRSMNISPNVLSYNLIIKALCRFGLVDKAVEKFREMPVRDCAPDVFT 212

Query: 77  YSTVIAAFAAAGRLTDAHALLEEM 6
           Y T++       R+ +A  LL+EM
Sbjct: 213 YCTLMDGLCKVNRVDEAVFLLDEM 236


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
 Frame = -1

Query: 605 FSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXXXXXRS 426
           +    P+ D+IF+ A + G Y  GD+T+ +L   YA+    D   +            R 
Sbjct: 40  YESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSG--DFGTL-FQVFDRMKRERRV 96

Query: 425 FPERVFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQPGDHQNHR 249
           F E+ F+ + RA G +  P  A+ LF R+   F C  +V SFN+ L+ ++ +   H+   
Sbjct: 97  FIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHR--- 153

Query: 248 LAVPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYST 69
            A+ FY   +  + +I+PN          +C+ G +  A+ + R + ++   PD ++Y T
Sbjct: 154 -ALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCT 212

Query: 68  VIAAFAAAGRLTDAHALLEEM 6
           ++       R+ +A  LL+EM
Sbjct: 213 LMDGLCKEDRIDEAVLLLDEM 233


>ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Populus trichocarpa]
           gi|550343237|gb|EEE79579.2| hypothetical protein
           POPTR_0003s15360g [Populus trichocarpa]
          Length = 672

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
 Frame = -1

Query: 620 ESEGDFSDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXXXXX 441
           + E      PP++D+IF+   + G Y  GD+T+ +L   YA+    D  ++         
Sbjct: 62  DREHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLG--DFKSLEKVLDRMRC 119

Query: 440 XXXRSFPERVFVPMLRALGASGRPLAAVRLFLRLP-TFGCTPSVISFNTALSALLSQPGD 264
                  E+ FV + +A G +  P  AV LF R+   F C  +V SFN+ L+ ++ +   
Sbjct: 120 EKRVVV-EKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLF 178

Query: 263 HQNHRLAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPD 87
           ++    A+ FY+  I  +  +I+PN          +C+ G +  AV++ R +P+   +PD
Sbjct: 179 YR----ALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPD 234

Query: 86  SYSYSTVIAAFAAAGRLTDAHALLEEM 6
            Y+Y T++     A R+ +A +LL+EM
Sbjct: 235 VYTYCTLMDGLCKADRIDEAVSLLDEM 261


>ref|XP_004966603.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Setaria italica]
          Length = 543

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 52/141 (36%), Positives = 77/141 (54%)
 Frame = -1

Query: 425 FPERVFVPMLRALGASGRPLAAVRLFLRLPTFGCTPSVISFNTALSALLSQPGDHQNHRL 246
           F +R F+P+LRAL    RPL ++RLFL LP+F   PSV SFN  L +L+S     + HRL
Sbjct: 132 FSDRAFLPLLRAL----RPLPSLRLFLSLPSFNSHPSVRSFNALLHSLVSA----RRHRL 183

Query: 245 AVPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTV 66
           A   + +A + +  I PN          L   GDL  A+ +L  +   G+ PD  +Y+TV
Sbjct: 184 AAALFRAA-QAKLYITPNLVSCNILLKGLVGVGDLDAALEVLDEMTGWGIVPDVVTYTTV 242

Query: 65  IAAFAAAGRLTDAHALLEEML 3
           + A+   G L  A  L ++++
Sbjct: 243 LTAYCGKGDLVGAQKLFDDII 263


>gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis]
          Length = 699

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
 Frame = -1

Query: 623 YESEGDFSDSPPLADEIFQDAQRS---GGYTQGDATYLALARAYADRDPPDLPAIGXXXX 453
           Y  +GD  ++ PL+ ++F  +  S   G Y  GD+T+ +L   YA     D  ++     
Sbjct: 36  YGDDGD--ENSPLSPQLFMPSSSSPDSGSYKLGDSTFYSLIHNYASS--ADFRSLEKVLD 91

Query: 452 XXXXXXXRSFPERVFVPMLRALGASGRPLAAVRLFLR-LPTFGCTPSVISFNTALSALLS 276
                      E+ F+ + RA G +  P  AV LF R L  F C P+V SFN+ L+ ++ 
Sbjct: 92  RIKSERRV-LVEKCFIVIFRAYGKAHLPNKAVDLFQRMLHDFRCRPTVKSFNSVLNVII- 149

Query: 275 QPGDHQNHRL--AVPFYSSAI--------------RRRPSIAPNXXXXXXXXXXLCRSGD 144
                Q H+   A+ FY S +               +  +I+PN          +C+ G 
Sbjct: 150 -----QEHKFSYALDFYYSNVVALRSGVCKDNILNMKNMNISPNVLTFNLVIKAMCKLGL 204

Query: 143 LSGAVRLLRHIPLRGLRPDSYSYSTVIAAFAAAGRLTDAHALLEEM 6
           +  AV++ R IPLR   PD ++YST++       R+ +A +LL+EM
Sbjct: 205 VDRAVQVFREIPLRNCTPDVFTYSTLMDGLCKENRIDEAVSLLDEM 250


>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Glycine max]
           gi|571476386|ref|XP_006586943.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X2 [Glycine max]
           gi|571476388|ref|XP_006586944.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X3 [Glycine max]
           gi|571476390|ref|XP_006586945.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X4 [Glycine max]
           gi|571476393|ref|XP_006586946.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X5 [Glycine max]
           gi|571476395|ref|XP_006586947.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X6 [Glycine max]
          Length = 642

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
 Frame = -1

Query: 602 SDSPPLADEIFQDAQRSGGYTQGDATYLALARAYADR-DPPDLPAIGXXXXXXXXXXXRS 426
           S  P  + EIF+   + G Y  GD ++ +L  ++A   D   L  +            R 
Sbjct: 38  SHKPHPSSEIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEV----LHQMKRERRV 93

Query: 425 FPERVFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQPGDHQNHR 249
           F E+ F+ M +A G +  P  AV LF R+   F C  +V SFN+ L+ ++ +   ++   
Sbjct: 94  FLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNR--- 150

Query: 248 LAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYS 72
            A+ FY+  +  +  +I PN          +CR G +  A+ + R IPLR   PD+Y+YS
Sbjct: 151 -ALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYS 209

Query: 71  TVIAAFAAAGRLTDAHALLEEM 6
           T++       R+ +A +LL+EM
Sbjct: 210 TLMHGLCKEERIDEAVSLLDEM 231


>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317554|gb|EFH47976.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 46/139 (33%), Positives = 74/139 (53%)
 Frame = -1

Query: 419 ERVFVPMLRALGASGRPLAAVRLFLRLPTFGCTPSVISFNTALSALLSQPGDHQNHRLAV 240
           E +F+ +LR  G +GR  +++R+FLR+P FG   SV S NT L+ L+     +Q   L  
Sbjct: 118 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVH 173

Query: 239 PFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVIA 60
             + ++ +    I PN          LC+  D+  A ++L  IP  GL P+  +Y+T++ 
Sbjct: 174 AMFKNS-KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILG 232

Query: 59  AFAAAGRLTDAHALLEEML 3
            + A G +  A  +LEEML
Sbjct: 233 GYVARGDMESAKRVLEEML 251


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/139 (33%), Positives = 74/139 (53%)
 Frame = -1

Query: 419 ERVFVPMLRALGASGRPLAAVRLFLRLPTFGCTPSVISFNTALSALLSQPGDHQNHRLAV 240
           E +F+ +LR  G +GR  +++R+FLR+P FG   SV S NT L+ L+     +Q   L  
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVH 175

Query: 239 PFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLRPDSYSYSTVIA 60
             + ++ +    I PN          LC+  D+  A ++L  IP  GL P+  +Y+T++ 
Sbjct: 176 AMFKNS-KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234

Query: 59  AFAAAGRLTDAHALLEEML 3
            + A G +  A  +LEEML
Sbjct: 235 GYVARGDMESAKRVLEEML 253


>ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutrema salsugineum]
           gi|557105267|gb|ESQ45601.1| hypothetical protein
           EUTSA_v10010168mg [Eutrema salsugineum]
          Length = 696

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
 Frame = -1

Query: 620 ESEGDFSDSP---PLADEIFQDAQRSGGYTQGDATYLALARAYADRDPPDLPAIGXXXXX 450
           E+E   +++P   P+++++F+ A + G Y  GD+T  ++   YA+    D  ++      
Sbjct: 83  ETEQQHTENPSAAPISEKMFESAPKMGSYKLGDSTLSSMIENYANSG--DFASV-EKLLS 139

Query: 449 XXXXXXRSFPERVFVPMLRALGASGRPLAAVRLFLRL-PTFGCTPSVISFNTALSALLSQ 273
                 R   E  F+ + RA G +  P   + LF R+   F C  ++ SFN+ L+ ++++
Sbjct: 140 RIRLENRMIREHSFIVLFRAYGKAHLPEKTIELFHRMVDEFQCKRTIKSFNSVLNVIINE 199

Query: 272 PGDHQNHRLAVPFYSSAIRRRPSIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHIPLRGLR 93
              H+     + FY   +    +IAPN          +C+ G +  A+ + R +P +   
Sbjct: 200 GRYHRG----LEFYDYVVNSNMNIAPNGLSFNLVIKAMCKLGFVDRAIEVFRVMPEKKCV 255

Query: 92  PDSYSYSTVIAAFAAAGRLTDAHALLEEM 6
           PD Y+Y T++       R+ +A  LL+EM
Sbjct: 256 PDGYTYCTLMDGLCKEERIDEAVLLLDEM 284


>ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Cicer arietinum]
          Length = 649

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
 Frame = -1

Query: 623 YESEGDFS-----DSPPLADEIFQDAQRS-GGYTQGDATYLALARAY-ADRDPPDLPAIG 465
           Y S  +F       SPPL  +IF+      G Y  GD ++ +L   + A  D   L  + 
Sbjct: 32  YSSSNNFPHTHQPSSPPLPPQIFKSRSHEWGSYKLGDLSFYSLIENFSASSDFVSLEHL- 90

Query: 464 XXXXXXXXXXXRSFPERVFVPMLRALGASGRPLAAVRLFLRLPT-FGCTPSVISFNTALS 288
                      R F E+ F+ M +A G +  P  A+ LF ++   F C  +V SFN+ L+
Sbjct: 91  ---LHQMKRENRVFIEKNFILMFKAYGKAHLPHKALDLFHKMEVEFHCKQTVKSFNSVLN 147

Query: 287 ALLSQPGDHQNHRLAVPFYSSAIRRRP-SIAPNXXXXXXXXXXLCRSGDLSGAVRLLRHI 111
            ++ +        LA+ FYS  I+ +  +I PN          LCR G +  AV + R I
Sbjct: 148 VVIQEG----LFNLALEFYSHVIQSKGFNIHPNELTFNLVIKALCRLGLVDQAVEVFRGI 203

Query: 110 PLRGLRPDSYSYSTVIAAFAAAGRLTDAHALLEEM 6
            +R   PD+Y+YST++      GR+ +A +LL+EM
Sbjct: 204 SVRNCVPDTYTYSTLMHGLCNVGRIDEAVSLLDEM 238