BLASTX nr result

ID: Zingiber25_contig00035661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035661
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indi...    60   2e-07
gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japo...    60   2e-07
emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group]          60   2e-07
gb|EMS57992.1| Putative SWI/SNF-related matrix-associated actin-...    57   3e-06
ref|XP_006653171.1| PREDICTED: putative SWI/SNF-related matrix-a...    56   6e-06

>gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indica Group]
          Length = 1138

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
 Frame = -3

Query: 172 PHLNPRPISAIRPPGVVT--------------DRNLLLYSNPKEPEFGEFPDEYDWLLVG 35
           P+LNPRPI A+ PP  +                 +L +   P + EFGEFP+E DW LVG
Sbjct: 194 PYLNPRPIRAVPPPEAMEMLESRRVRARPPPPSSDLRMVVAPPDAEFGEFPEERDWFLVG 253

Query: 34  KAYVNGLSTCR 2
           ++YV GLST R
Sbjct: 254 RSYVTGLSTNR 264


>gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
 Frame = -3

Query: 172 PHLNPRPISAIRPPGVVT--------------DRNLLLYSNPKEPEFGEFPDEYDWLLVG 35
           P+LNPRPI A+ PP  +                 +L +   P + EFGEFP+E DW LVG
Sbjct: 188 PYLNPRPIRAVPPPEAMEMLESRRVRARPPPPSSDLRMVVAPPDAEFGEFPEERDWFLVG 247

Query: 34  KAYVNGLSTCR 2
           ++YV GLST R
Sbjct: 248 RSYVTGLSTNR 258


>emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
 Frame = -3

Query: 172 PHLNPRPISAIRPPGVVT--------------DRNLLLYSNPKEPEFGEFPDEYDWLLVG 35
           P+LNPRPI A+ PP  +                 +L +   P + EFGEFP+E DW LVG
Sbjct: 188 PYLNPRPIRAVPPPEAMEMLESRRVRARPPPPSSDLRMVVAPPDAEFGEFPEERDWFLVG 247

Query: 34  KAYVNGLSTCR 2
           ++YV GLST R
Sbjct: 248 RSYVTGLSTNR 258


>gb|EMS57992.1| Putative SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 2
           [Triticum urartu]
          Length = 488

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 FSSLARARLAPHLNPRPISAIRPPGVVTDRNLLLYSNPKEPEFGEF-PDEYDWLLVGKAY 26
           F  L  +R AP+LNP+PI A+ PPG     +  +   P+  E  E+ PD  +W+   K+Y
Sbjct: 181 FIDLTTSRPAPYLNPKPIRAMPPPGATPLSDWKMVVAPQPAEMDEYPPDHREWVFFTKSY 240

Query: 25  VNGLSTCR 2
             GLSTCR
Sbjct: 241 STGLSTCR 248


>ref|XP_006653171.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Oryza brachyantha]
          Length = 1138

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
 Frame = -3

Query: 172 PHLNPRPISAIRPPGVVT---------------DRNLLLYSNPKEPEFGEFPDEYDWLLV 38
           P+LN RPI A+ PP  +                 ++  +   P + EFGEFP+E DW LV
Sbjct: 193 PYLNARPIRAVPPPEAMEMYDPPRSVRATAPPPSKDWRMVVAPPDAEFGEFPEERDWFLV 252

Query: 37  GKAYVNGLSTCR 2
           G++YV GLST R
Sbjct: 253 GRSYVTGLSTNR 264


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