BLASTX nr result
ID: Zingiber25_contig00035642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00035642
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus pe... 60 4e-07
ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Popu... 59 7e-07
ref|XP_002305359.1| predicted protein [Populus trichocarpa] 59 7e-07
gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus n... 58 7e-07
gb|EXB38051.1| putative ubiquitin conjugation factor E4 [Morus n... 58 8e-07
ref|XP_002324089.1| U-box domain-containing family protein [Popu... 56 1e-06
ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ... 57 2e-06
ref|XP_004304262.1| PREDICTED: probable ubiquitin conjugation fa... 57 3e-06
ref|XP_006482712.1| PREDICTED: probable ubiquitin conjugation fa... 56 4e-06
ref|XP_006431253.1| hypothetical protein CICLE_v10010958mg [Citr... 56 4e-06
ref|XP_006431252.1| hypothetical protein CICLE_v10010958mg [Citr... 56 4e-06
ref|XP_006431250.1| hypothetical protein CICLE_v10010958mg [Citr... 56 4e-06
ref|XP_006431249.1| hypothetical protein CICLE_v10010958mg [Citr... 56 4e-06
ref|XP_006431248.1| hypothetical protein CICLE_v10010958mg [Citr... 56 4e-06
ref|XP_004489437.1| PREDICTED: probable ubiquitin conjugation fa... 56 4e-06
ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation fa... 56 4e-06
ref|XP_006848724.1| hypothetical protein AMTR_s00177p00048180, p... 56 6e-06
gb|ESW23274.1| hypothetical protein PHAVU_004G033100g [Phaseolus... 55 7e-06
ref|XP_006289759.1| hypothetical protein CARUB_v10003359mg [Caps... 55 1e-05
gb|ABG89128.1| UFD2 [synthetic construct] 55 1e-05
>gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus persica]
Length = 1028
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L +IGE G+VIQEF+ L SEA++TEA+L IP+EFL+PIQ
Sbjct: 882 NEQLFSAAADVLRRIGEDGRVIQEFIELGAKAKVAASEAMDTEAVLGDIPDEFLDPIQ 939
>ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Populus trichocarpa]
gi|550340866|gb|ERP62098.1| hypothetical protein
POPTR_0004s12060g [Populus trichocarpa]
Length = 1020
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*LXXXXXXS--EALNTEAILNKIPNEFLNPIQ 293
N+ +FT+AVD+L +IGE G+VIQEF+ L + EA++ EA L +IP+EFL+PIQ
Sbjct: 874 NEQLFTAAVDVLRRIGEDGRVIQEFIELGTKARVAACEAMDAEAALGEIPDEFLDPIQ 931
>ref|XP_002305359.1| predicted protein [Populus trichocarpa]
Length = 930
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*LXXXXXXS--EALNTEAILNKIPNEFLNPIQ 293
N+ +FT+AVD+L +IGE G+VIQEF+ L + EA++ EA L +IP+EFL+PIQ
Sbjct: 784 NEQLFTAAVDVLRRIGEDGRVIQEFIELGTKARVAACEAMDAEAALGEIPDEFLDPIQ 841
>gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
Length = 1070
Score = 57.8 bits (138), Expect(2) = 7e-07
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +3
Query: 135 VFTSAVDILSKIGEHGKVIQEFV*LXXXXXX--SEALNTEAILNKIPNEFLNPIQ 293
+FT+A D+L +IGE G++IQEF L SEA+ TEA+L +IP+EFL+PIQ
Sbjct: 927 LFTAAADVLRRIGEDGRIIQEFAELGAKAKVAASEAMGTEAVLGEIPDEFLDPIQ 981
Score = 20.8 bits (42), Expect(2) = 7e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 2 AILKDG*TYNERYLL 46
AI KDG +YN++ LL
Sbjct: 911 AISKDGRSYNDQSLL 925
>gb|EXB38051.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
Length = 452
Score = 57.8 bits (138), Expect(2) = 8e-07
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +3
Query: 135 VFTSAVDILSKIGEHGKVIQEFV*LXXXXXX--SEALNTEAILNKIPNEFLNPIQ 293
+FT+A D+L +IGE G++IQEF L SEA+ TEA+L +IP+EFL+PIQ
Sbjct: 309 LFTAAADVLRRIGEDGRIIQEFAELGAKAKVAASEAMGTEAVLGEIPDEFLDPIQ 363
Score = 20.8 bits (42), Expect(2) = 8e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 2 AILKDG*TYNERYLL 46
AI KDG +YN++ LL
Sbjct: 293 AISKDGRSYNDQSLL 307
>ref|XP_002324089.1| U-box domain-containing family protein [Populus trichocarpa]
gi|222867091|gb|EEF04222.1| U-box domain-containing
family protein [Populus trichocarpa]
Length = 1019
Score = 55.8 bits (133), Expect(2) = 1e-06
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +FT+A D+L +IGE G+V+QEF+ L SEA++ E L ++P EFL+PIQ
Sbjct: 873 NEQLFTAAADVLRRIGEDGRVVQEFIELGTKTKVAASEAMDAEVTLGEVPEEFLDPIQ 930
Score = 21.9 bits (45), Expect(2) = 1e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 2 AILKDG*TYNER 37
AILKDG +YNE+
Sbjct: 864 AILKDGRSYNEQ 875
>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 1031
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*LXXXXXX--SEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L +IGE +VIQEFV L SEA++TEA+L +IP+EFL+PIQ
Sbjct: 885 NEQLFSAAADVLRRIGEDMRVIQEFVELGSKAKVAASEAMDTEAVLGEIPDEFLDPIQ 942
>ref|XP_004304262.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Fragaria
vesca subsp. vesca]
Length = 1031
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F +A D+L +IGE G+VIQEFV L SEA++ EA+L IP+EFL+PIQ
Sbjct: 886 NEQLFGAAADVLRRIGEDGRVIQEFVELGAKAKVSASEAMDAEAVLGDIPDEFLDPIQ 943
>ref|XP_006482712.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Citrus
sinensis]
Length = 1049
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 903 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 960
>ref|XP_006431253.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533310|gb|ESR44493.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 732
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 633 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 690
>ref|XP_006431252.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533309|gb|ESR44492.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 779
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 633 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 690
>ref|XP_006431250.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|567877323|ref|XP_006431251.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
gi|557533307|gb|ESR44490.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
gi|557533308|gb|ESR44491.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 564
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 418 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 475
>ref|XP_006431249.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533306|gb|ESR44489.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 1049
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 903 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 960
>ref|XP_006431248.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533305|gb|ESR44488.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 1002
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F++A D+L KIGE G++IQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 903 NEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 960
>ref|XP_004489437.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cicer
arietinum]
Length = 1030
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N +F+SA D+L +IGE G++IQEF+ L SEA++ EA L +IP+EFL+PIQ
Sbjct: 883 NDQLFSSAADVLRRIGEDGRLIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQ 940
>ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
max]
Length = 1038
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*LXXXXXX--SEALNTEAILNKIPNEFLNPIQ 293
N +F++ D+L +IGE G++IQEF+ L SEA++TEA L +IP+EFL+PIQ
Sbjct: 894 NDQLFSAGADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDTEATLGEIPDEFLDPIQ 951
>ref|XP_006848724.1| hypothetical protein AMTR_s00177p00048180, partial [Amborella
trichopoda] gi|548852135|gb|ERN10305.1| hypothetical
protein AMTR_s00177p00048180, partial [Amborella
trichopoda]
Length = 848
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F +AV +L KIGE G+VIQEF+ L SEA++ EA L IP+EFL+PIQ
Sbjct: 703 NEQIFAAAVVVLCKIGEDGRVIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ 760
>gb|ESW23274.1| hypothetical protein PHAVU_004G033100g [Phaseolus vulgaris]
Length = 1042
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N +F++A D+L +IGE G++IQEF+ L SEA++ EA L +IP EFL+PIQ
Sbjct: 896 NDQLFSAAADVLRRIGEDGRIIQEFIQLGAKAKVAASEAMDAEATLGEIPEEFLDPIQ 953
>ref|XP_006289759.1| hypothetical protein CARUB_v10003359mg [Capsella rubella]
gi|482558465|gb|EOA22657.1| hypothetical protein
CARUB_v10003359mg [Capsella rubella]
Length = 1038
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F + D+L +IGE G++IQEF+ L SEAL+ EA L +IP+EFL+PIQ
Sbjct: 893 NEQLFNAGADVLRRIGEEGRIIQEFMELGIKAKAAASEALDAEAALGEIPDEFLDPIQ 950
>gb|ABG89128.1| UFD2 [synthetic construct]
Length = 1037
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 126 NKTVFTSAVDILSKIGEHGKVIQEFV*L--XXXXXXSEALNTEAILNKIPNEFLNPIQ 293
N+ +F + D+L +IGE G++IQEF+ L SEAL+ EA L +IP+EFL+PIQ
Sbjct: 892 NEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQ 949