BLASTX nr result

ID: Zingiber25_contig00035547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035547
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT24741.1| hypothetical protein F775_26325 [Aegilops tauschii]     55   3e-08
ref|NP_001141683.1| hypothetical protein [Zea mays] gi|194705538...    55   7e-08
ref|XP_003571947.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    53   2e-07
gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indi...    54   2e-07
ref|XP_004982688.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    55   2e-07
ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group] g...    52   6e-07
ref|XP_006661926.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    54   8e-07
ref|XP_002464418.1| hypothetical protein SORBIDRAFT_01g017830 [S...    52   8e-07

>gb|EMT24741.1| hypothetical protein F775_26325 [Aegilops tauschii]
          Length = 321

 Score = 54.7 bits (130), Expect(2) = 3e-08
 Identities = 26/37 (70%), Positives = 26/37 (70%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WRLA SD  IW TLD G LKSNFIQ  A P
Sbjct: 34  VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 70



 Score = 28.5 bits (62), Expect(2) = 3e-08
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSD+RL       K  +  +  S  + N  IFH+   +      KD++ H
Sbjct: 71  YIWVDDRSDKRL------AKILRVAMAISRGNVNCMIFHYNLYM------KDEHLH 114


>ref|NP_001141683.1| hypothetical protein [Zea mays] gi|194705538|gb|ACF86853.1| unknown
           [Zea mays] gi|414870842|tpg|DAA49399.1| TPA:
           hypothetical protein ZEAMMB73_662744 [Zea mays]
           gi|414870843|tpg|DAA49400.1| TPA: hypothetical protein
           ZEAMMB73_662744 [Zea mays]
          Length = 348

 Score = 54.7 bits (130), Expect(2) = 7e-08
 Identities = 26/37 (70%), Positives = 26/37 (70%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WRLA SD  IW TLD G LKSNFIQ  A P
Sbjct: 61  VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 97



 Score = 27.3 bits (59), Expect(2) = 7e-08
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSDRRL       +  +  +  S  + N  IFH+   +      KD++ H
Sbjct: 98  YIWVDDRSDRRL------ARILRVAMAISCGNVNCMIFHYNLFM------KDEHLH 141


>ref|XP_003571947.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Brachypodium
           distachyon]
          Length = 401

 Score = 52.8 bits (125), Expect(2) = 2e-07
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WR+A +D  IW TLD G LKSNFIQ  A P
Sbjct: 114 VSQVCRLWRMACADPLIWGTLDFGLLKSNFIQTRASP 150



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHF 105
           +IWVD RSD+RL       K  +  +  S  + N  IFH+
Sbjct: 151 YIWVDERSDKRL------AKILRLAVAISLGNVNCMIFHY 184


>gb|EEC67261.1| hypothetical protein OsI_34223 [Oryza sativa Indica Group]
          Length = 321

 Score = 53.9 bits (128), Expect(2) = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WRLA SD  IW+TLD G LKSN+IQ  A P
Sbjct: 34  VSQVCRLWRLACSDPLIWSTLDFGLLKSNYIQTRASP 70



 Score = 26.9 bits (58), Expect(2) = 2e-07
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSD+RL+   ++       I + N S    IFH+   +      KD++ H
Sbjct: 71  YIWVDDRSDKRLSRILRVA----MSISYGNVS--CLIFHYNLYM------KDEHLH 114


>ref|XP_004982688.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Setaria
           italica]
          Length = 321

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 26/37 (70%), Positives = 26/37 (70%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WRLA SD  IW TLD G LKSNFIQ  A P
Sbjct: 34  VSQVCRLWRLACSDPLIWGTLDFGLLKSNFIQTRASP 70



 Score = 25.8 bits (55), Expect(2) = 2e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSD+RL       +  +  +  S  + N  IFH+   +      KD++ H
Sbjct: 71  YIWVDDRSDKRL------ARILRVAMAVSCGNVNCMIFHYNLYM------KDEHLH 114


>ref|NP_001064994.1| Os10g0502900 [Oryza sativa Japonica Group]
           gi|78708871|gb|ABB47846.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113639603|dbj|BAF26908.1| Os10g0502900 [Oryza sativa
           Japonica Group] gi|125575319|gb|EAZ16603.1| hypothetical
           protein OsJ_32075 [Oryza sativa Japonica Group]
           gi|215700973|dbj|BAG92397.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 321

 Score = 52.0 bits (123), Expect(2) = 6e-07
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR W LA SD  IW+TLD G LKSN+IQ  A P
Sbjct: 34  VSQVCRLWHLACSDPLIWSTLDFGLLKSNYIQTRASP 70



 Score = 26.9 bits (58), Expect(2) = 6e-07
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSD+RL+   ++       I + N S    IFH+   +      KD++ H
Sbjct: 71  YIWVDDRSDKRLSRILRVA----MSISYGNVS--CLIFHYNLYM------KDEHLH 114


>ref|XP_006661926.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Oryza
           brachyantha]
          Length = 321

 Score = 53.9 bits (128), Expect(2) = 8e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WRLA SD  IW+TLD G LKSN+IQ  A P
Sbjct: 34  VSQVCRLWRLACSDPLIWSTLDFGLLKSNYIQTRASP 70



 Score = 24.6 bits (52), Expect(2) = 8e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 224 FIWVDARSDRRL 189
           +IWVD RSD+RL
Sbjct: 71  YIWVDDRSDKRL 82


>ref|XP_002464418.1| hypothetical protein SORBIDRAFT_01g017830 [Sorghum bicolor]
           gi|241918272|gb|EER91416.1| hypothetical protein
           SORBIDRAFT_01g017830 [Sorghum bicolor]
          Length = 173

 Score = 52.4 bits (124), Expect(2) = 8e-07
 Identities = 25/37 (67%), Positives = 25/37 (67%)
 Frame = -3

Query: 334 VSLVCRSWRLAYSDAFIWNTLDLGFLKSNFIQMSALP 224
           VS VCR WR A SD  IW TLD G LKSNFIQ  A P
Sbjct: 35  VSQVCRLWRSACSDPLIWGTLDFGLLKSNFIQTRASP 71



 Score = 26.2 bits (56), Expect(2) = 8e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 224 FIWVDARSDRRLNGAFKIVKFWKKCI*FSNFSKNLFIFHFTTSVIFKL**KDDYNH 57
           +IWVD RSD+RL       +  +  +  S  + N  IFH+   +      KD++ H
Sbjct: 72  YIWVDDRSDKRL------ARILRVAMAISCGNVNCMIFHYNLFM------KDEHLH 115


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