BLASTX nr result

ID: Zingiber25_contig00035444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035444
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arab...    56   4e-06
ref|XP_004295696.1| PREDICTED: uncharacterized protein LOC101304...    56   6e-06
ref|XP_006300500.1| hypothetical protein CARUB_v10020419mg [Caps...    55   1e-05

>ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arabidopsis lyrata subsp.
           lyrata] gi|297333607|gb|EFH64025.1| hypothetical protein
           ARALYDRAFT_477076 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   PSCAIRWRELLRLKRAAGSKLGHENA--SAAASSIGSRKHFFHRNPKSPSVLDPAMSLPX 174
           P C+ RWR+LL LKR + +         S   SS  S K F HR+ +S S    A  L  
Sbjct: 117 PRCSSRWRDLLGLKRFSQNSKAASTTIPSNPRSSTSSLKQFLHRSSRSSSSSSDASLLMS 176

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXAAGRDHEGLPHLSLDAEKPHHH 312
                                   ++G DHE +P LSLDAE+P+H+
Sbjct: 177 LPLLKDSDCESISISSSRMSLSSSSSGHDHEDIPRLSLDAERPNHN 222


>ref|XP_004295696.1| PREDICTED: uncharacterized protein LOC101304556 [Fragaria vesca
           subsp. vesca]
          Length = 429

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
 Frame = +1

Query: 1   PSCAIRWRELLRLKRA-AGSKLGHENASAAASSIGSR-----------KHFFHRNPKS-P 141
           P C+ RWRELL LK+    S  G+ N + A + +  +           KHF HR+ KS  
Sbjct: 145 PRCSSRWRELLGLKKLYLNSSNGNGNGNGAKAEVSQKTTSSSAAPKSLKHFLHRSSKSLS 204

Query: 142 SVLDPAMSLPXXXXXXXXXXXXXXXXXXXXXXXXXAAGRDHEGLPHLSLDAEKPHHHMAM 321
           S +D ++SLP                         ++G +H+ LP LSLD++KP+ H   
Sbjct: 205 SSIDASLSLPLLRDSDCESVSISSRLSLSSS----SSGHEHDDLPRLSLDSDKPNPHPNQ 260

Query: 322 LRLVRPLPATAE 357
           +  +   P  A+
Sbjct: 261 MFSLHRKPTRAK 272


>ref|XP_006300500.1| hypothetical protein CARUB_v10020419mg [Capsella rubella]
           gi|482569210|gb|EOA33398.1| hypothetical protein
           CARUB_v10020419mg [Capsella rubella]
          Length = 395

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
 Frame = +1

Query: 1   PSCAIRWRELLRLKRAAGSKLGHENASAAASSIGSRKHFFHRNPK-------SPSVLDPA 159
           P C+ RWR+LL LKR + +       S   SS  S K F HR+ +       S S     
Sbjct: 124 PRCSSRWRDLLGLKRFSQNSKAAATTSNPRSSTSSLKQFLHRSSRSSTSSGSSSSDASVL 183

Query: 160 MSLPXXXXXXXXXXXXXXXXXXXXXXXXXAAGRDHEGLPHLSLDAEKPHHH 312
           MSLP                         ++G DHE LP LSLDA++P+H+
Sbjct: 184 MSLP---LLKDSDCESLSISSSRMSLSSSSSGHDHEDLPRLSLDADRPNHN 231


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