BLASTX nr result
ID: Zingiber25_contig00035210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00035210
(381 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308499.2| hypothetical protein POPTR_0006s23290g [Popu... 62 4e-08
ref|XP_002308500.1| predicted protein [Populus trichocarpa] 62 4e-08
ref|XP_006484027.1| PREDICTED: signal recognition particle subun... 61 7e-08
ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, par... 61 8e-08
ref|XP_002514972.1| Signal recognition particle subunit srp72, p... 62 1e-07
emb|CBI27541.3| unnamed protein product [Vitis vinifera] 60 1e-07
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD... 60 1e-07
ref|XP_006646550.1| PREDICTED: signal recognition particle subun... 61 1e-07
ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kD... 61 2e-07
ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kD... 57 2e-07
gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao] 60 3e-07
gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao] 60 3e-07
ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kD... 58 3e-07
ref|XP_003531178.1| PREDICTED: signal recognition particle subun... 60 4e-07
gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus... 58 6e-07
gb|ESW30720.1| hypothetical protein PHAVU_002G176900g [Phaseolus... 59 7e-07
ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Caps... 59 7e-07
ref|XP_003524881.1| PREDICTED: signal recognition particle subun... 59 7e-07
ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arab... 59 7e-07
dbj|BAJ93685.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 9e-07
>ref|XP_002308499.2| hypothetical protein POPTR_0006s23290g [Populus trichocarpa]
gi|550336923|gb|EEE92022.2| hypothetical protein
POPTR_0006s23290g [Populus trichocarpa]
Length = 663
Score = 61.6 bits (148), Expect(2) = 4e-08
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 133 EGSQRVISTK*KWNLGYPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQ 303
EG + K K YP+GFDPA GP PDP + +ERSSYRP+ K K SQ
Sbjct: 554 EGKKEKPKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQ 613
Query: 304 GAVVREKRDAATSSS 348
GAVVREK +A +S+
Sbjct: 614 GAVVREKHEAGATST 628
Score = 21.2 bits (43), Expect(2) = 4e-08
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++V+SLEK + AKH
Sbjct: 527 IDVDSLEKTSGAKH 540
>ref|XP_002308500.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 61.6 bits (148), Expect(2) = 4e-08
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 133 EGSQRVISTK*KWNLGYPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQ 303
EG + K K YP+GFDPA GP PDP + +ERSSYRP+ K K SQ
Sbjct: 102 EGKKEKPKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQ 161
Query: 304 GAVVREKRDAATSSS 348
GAVVREK +A +S+
Sbjct: 162 GAVVREKHEAGATST 176
Score = 21.2 bits (43), Expect(2) = 4e-08
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++V+SLEK + AKH
Sbjct: 75 IDVDSLEKTSGAKH 88
>ref|XP_006484027.1| PREDICTED: signal recognition particle subunit SRP72-like [Citrus
sinensis]
Length = 666
Score = 61.2 bits (147), Expect(2) = 7e-08
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRPR K K SQGAVVREK DA + +
Sbjct: 572 YPKGFDPANPGPPPDPERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGA 630
Score = 20.8 bits (42), Expect(2) = 7e-08
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++V+SLEK + AKH
Sbjct: 527 VDVDSLEKTSGAKH 540
>ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, partial [Citrus
clementina] gi|557540323|gb|ESR51367.1| hypothetical
protein CICLE_v100309552mg, partial [Citrus clementina]
Length = 208
Score = 61.2 bits (147), Expect(2) = 8e-08
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRPR K K SQGAVVREK DA + +
Sbjct: 114 YPKGFDPANPGPPPDPERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGA 172
Score = 20.8 bits (42), Expect(2) = 8e-08
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++V+SLEK + AKH
Sbjct: 69 VDVDSLEKTSGAKH 82
>ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus
communis] gi|223546023|gb|EEF47526.1| Signal recognition
particle subunit srp72, putative [Ricinus communis]
Length = 664
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 133 EGSQRVISTK*KWNLGYPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQ 303
EG + K K YP+GFDPA GP PDP + +ERSSYRP+ K K SQ
Sbjct: 555 EGKKEKPKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQ 614
Query: 304 GAVVREKRDAATSSS 348
GAVVREK +A S++
Sbjct: 615 GAVVREKHEAGASAT 629
>emb|CBI27541.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 60.5 bits (145), Expect(2) = 1e-07
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAVVREK +AA S +
Sbjct: 575 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAAGSDT 633
Score = 20.8 bits (42), Expect(2) = 1e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++VESLE+ + AKH
Sbjct: 530 VDVESLERTSGAKH 543
>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
vinifera]
Length = 673
Score = 60.5 bits (145), Expect(2) = 1e-07
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAVVREK +AA S +
Sbjct: 575 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAAGSDT 633
Score = 20.8 bits (42), Expect(2) = 1e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++VESLE+ + AKH
Sbjct: 530 VDVESLERTSGAKH 543
>ref|XP_006646550.1| PREDICTED: signal recognition particle subunit SRP72-like [Oryza
brachyantha]
Length = 675
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGHI-SSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K + +QGAV R+K D + +SS
Sbjct: 582 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAQVRGAQGAVTRDKHDTSATSS 639
>ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cicer
arietinum]
Length = 664
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSSY 351
YP+GF+PA GP PDP + +ERS++RP+ K K SQGAVVREK+DA +SSS+
Sbjct: 570 YPKGFNPANPGPPPDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVREKQDAGSSSSH 629
>ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kDa protein-like
[Brachypodium distachyon]
Length = 665
Score = 57.4 bits (137), Expect(2) = 2e-07
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGHI-SSQGAVVREKRDAATSSS 348
YP+ FDPA GP PDP + +ERSSYRP+ K K + +QGAV REK D + +++
Sbjct: 575 YPKSFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAQVRGAQGAVTREKHDPSAANA 632
Score = 23.1 bits (48), Expect(2) = 2e-07
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 90 LNVESLEKATTAKH*RFTKGDLHKVEVESRVPK 188
+N ESLEK + A+H KVEV V K
Sbjct: 535 INAESLEKTSGARH----VDQAMKVEVPEEVKK 563
>gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao]
Length = 667
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAVVREK +A+ S++
Sbjct: 571 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASAT 629
>gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao]
Length = 670
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAVVREK +A+ S++
Sbjct: 574 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASAT 632
>ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kDa protein-like
[Fragaria vesca subsp. vesca]
Length = 661
Score = 57.8 bits (138), Expect(2) = 3e-07
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGHI---SSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQG+V R+K +A +SS
Sbjct: 568 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAAQVRGSQGSVARDKHEAGATSS 627
Score = 21.9 bits (45), Expect(2) = 3e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
+NV++LEK + AKH
Sbjct: 523 INVDNLEKTSGAKH 536
>ref|XP_003531178.1| PREDICTED: signal recognition particle subunit SRP72-like [Glycine
max]
Length = 662
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP+PDP + +ERS+YRP+ K K SQGAVVR+K D SS+
Sbjct: 569 YPKGFDPANPGPAPDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSN 627
>gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus notabilis]
Length = 671
Score = 58.2 bits (139), Expect(2) = 6e-07
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAVVREK +A + +
Sbjct: 574 YPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAGPAGA 632
Score = 20.8 bits (42), Expect(2) = 6e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 90 LNVESLEKATTAKH 131
++V+SLEK + AKH
Sbjct: 529 VDVDSLEKTSGAKH 542
>gb|ESW30720.1| hypothetical protein PHAVU_002G176900g [Phaseolus vulgaris]
Length = 663
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERS++RP+ K K SQGAVVR+K DA SS+
Sbjct: 569 YPKGFDPANPGPPPDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVRDKHDAGASSN 627
>ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Capsella rubella]
gi|482569545|gb|EOA33733.1| hypothetical protein
CARUB_v10019924mg [Capsella rubella]
Length = 656
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAV ++K++AA S+S
Sbjct: 571 YPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQIRGSQGAVAKDKQEAAPSTS 629
>ref|XP_003524881.1| PREDICTED: signal recognition particle subunit SRP72-like [Glycine
max]
Length = 662
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERS+YRP+ K K SQGAVVR+K D SS+
Sbjct: 569 YPKGFDPANPGPPPDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSN 627
>ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arabidopsis lyrata subsp.
lyrata] gi|297334457|gb|EFH64875.1| hypothetical protein
ARALYDRAFT_475871 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGH--ISSQGAVVREKRDAATSSS 348
YP+GFDPA GP PDP + +ERSSYRP+ K K SQGAV ++K++AA S+S
Sbjct: 568 YPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQIRGSQGAVTKDKQEAAPSTS 626
>dbj|BAJ93685.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 664
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +1
Query: 181 YPRGFDPAKQGPSPDPGE-MATKERSSYRPRGKIKEGHI-SSQGAVVREKRDAATSSS 348
YP+G+DPA GP PDP + +ERS+YRP+ K K + +QGAV REK DA+ +++
Sbjct: 577 YPKGYDPANPGPPPDPERWLPKRERSTYRPKRKDKRAQVRGAQGAVSREKHDASAANA 634