BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00035001
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW28625.1| hypothetical protein PHAVU_002G004400g [Phaseolus...   129   4e-28
ref|XP_004511762.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002528772.1| pentatricopeptide repeat-containing protein,...   127   1e-27
ref|XP_006436813.1| hypothetical protein CICLE_v10030784mg [Citr...   127   2e-27
gb|EMJ10120.1| hypothetical protein PRUPE_ppa1027215mg, partial ...   127   2e-27
ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
ref|XP_003611431.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
ref|XP_006605795.1| PREDICTED: pentatricopeptide repeat-containi...   123   3e-26
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo...   122   5e-26
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi...   122   5e-26
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat...   122   5e-26
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g...   122   5e-26
ref|XP_003576330.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   120   1e-25
gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [The...   120   2e-25
emb|CBI37206.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
gb|EOY06182.1| Pentatricopeptide repeat-containing protein [Theo...   119   5e-25
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...   119   5e-25
gb|ESW08896.1| hypothetical protein PHAVU_009G083700g [Phaseolus...   118   7e-25

>gb|ESW28625.1| hypothetical protein PHAVU_002G004400g [Phaseolus vulgaris]
          Length = 718

 Score =  129 bits (324), Expect = 4e-28
 Identities = 73/168 (43%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE + EAF   AE    G +P     A L GA+GSVA L+ G Q+HG+  K     D +L
Sbjct: 433 NELIAEAFCLFAEMMDHGVSPMSSTYAVLFGAMGSVAYLDQGRQLHGMQFKTASEDDLIL 492

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N+L+SMYAK G++D A R F  +  + D +SWN+++MGL+ HGRA+EAL+++EAM    
Sbjct: 493 ENSLISMYAKCGEIDDAYRVFSNMTCR-DKISWNSMIMGLSDHGRASEALKVYEAMLEFG 551

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAE-QEIPAGPEHLACVV 4
             PD +T LG LTAC HAG+VD+  E    M     I    EH   ++
Sbjct: 552 IYPDDLTFLGVLTACAHAGLVDKGWEFFITMVNAYAIQPSMEHCISII 599



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/107 (36%), Positives = 59/107 (55%)
 Frame = -3

Query: 357 VAKVNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAE 178
           V ++ P  + V  NA+V    +SGD++ AR  FEE+P K+ VVSWNA++ G A  GR +E
Sbjct: 150 VFEIMPERNVVSWNAMVVALLRSGDLENARVVFEEIPCKN-VVSWNAMIAGYAESGRMSE 208

Query: 177 ALRLFEAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQEI 37
           A  LF+ M  +   + +T    ++     G V+ A    R M E+ I
Sbjct: 209 ARELFQKMEFR---NVITWTSMVSGYCREGDVEGACCFFRAMPEKNI 252


>ref|XP_004511762.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Cicer arietinum]
          Length = 741

 Score =  127 bits (320), Expect = 1e-27
 Identities = 75/170 (44%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKV--NPAADP 328
           NE + EA    AE  A G  P +   A L GAVGSVA L++G Q+H +  K       D 
Sbjct: 447 NELIAEAINLFAEMMAQGVPPINSTYAVLFGAVGSVAYLDLGLQLHSMQLKTIDEYEHDL 506

Query: 327 VLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-R 151
            L N+L+SMYAK G++D A R F  +  + D +SWN+++MGL+ HGRA+EAL+++E M  
Sbjct: 507 HLDNSLISMYAKCGEIDDAYRIFSNMTCR-DKISWNSMIMGLSDHGRASEALKMYENMLE 565

Query: 150 GKAEPDAVTCLGALTACDHAGMVDRAEEVLRFMA-EQEIPAGPEHLACVV 4
               PDAVT LG LTAC HAG+VD+  E+L  M  + ++  G EH   ++
Sbjct: 566 LGVYPDAVTFLGVLTACAHAGLVDKGWELLSVMVNDYDLQPGLEHYISII 615


>ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531775|gb|EEF33594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 676

 Score =  127 bits (320), Expect = 1e-27
 Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   EA    +E    G  P     A L GA G+VA L+ G Q+H ++ K     D +L
Sbjct: 377 NELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLIL 436

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N+L+SMYAK G++  A R F ++   HD++SWN+++MG +HHG A EAL +FEAM    
Sbjct: 437 ENSLISMYAKCGEIRNAYRIFSQM-ISHDLISWNSMIMGFSHHGLANEALEVFEAMVDSG 495

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             P++VT LG L+AC HAG++++  E+   M++   +  G EH  C+V
Sbjct: 496 THPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMV 543


>ref|XP_006436813.1| hypothetical protein CICLE_v10030784mg [Citrus clementina]
           gi|568863913|ref|XP_006485372.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568863915|ref|XP_006485373.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|557539009|gb|ESR50053.1| hypothetical protein
           CICLE_v10030784mg [Citrus clementina]
          Length = 752

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   +A     E RA G  P +   + L GA G+ A +++G Q+H ++ K    +D +L
Sbjct: 462 NELFVDATYLFMEMRAHGVPPLNATFSVLFGAAGATANIDLGRQIHCVLMKTESESDLIL 521

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N L+SMYAK G +D A   F  + ++ D+VSWN++VMG +HHG A E L++FE+M    
Sbjct: 522 ENCLISMYAKCGVIDNAYNVFSNMVSR-DLVSWNSMVMGFSHHGLANETLKVFESMLESG 580

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAE-QEIPAGPEHLACVV 4
             P++VT LG L+AC HAG+V R  E+   M +  +I  GPEH   ++
Sbjct: 581 THPNSVTFLGILSACSHAGLVSRGWELFNAMFDVYKIEPGPEHYVSMI 628



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/97 (36%), Positives = 54/97 (55%)
 Frame = -3

Query: 342 PAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLF 163
           P  + V  NA++S + ++G +  ARR FEE+P ++ VVSW A++ GLA  GR  EA +LF
Sbjct: 122 PQRNVVSYNAMLSGFLQNGRLSEARRLFEEMPERN-VVSWTAMICGLADAGRVCEARKLF 180

Query: 162 EAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFM 52
           E M    E + V+    +      G ++ A +V   M
Sbjct: 181 EEM---PERNVVSWNSMVVGLIRNGELNEARKVFNSM 214


>gb|EMJ10120.1| hypothetical protein PRUPE_ppa1027215mg, partial [Prunus persica]
          Length = 626

 Score =  127 bits (318), Expect = 2e-27
 Identities = 68/168 (40%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   EA    +E R++G +P +   + LLGA G++A L+ G Q HGL+ K    +D  +
Sbjct: 342 NELFAEATDFFSEMRSEGVSPLNSTYSVLLGAAGAMAYLDPGRQFHGLLIKTQYESDLFI 401

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N+L+SMYAK G++D A RAF  +  + D++SWN+++MG + HG A E L+++E M +  
Sbjct: 402 NNSLISMYAKCGEIDDAYRAFSNMSLR-DLISWNSMIMGFSDHGHANETLKIYECMVKSG 460

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAE-QEIPAGPEHLACVV 4
             P++VT LG L+AC HAG+V R  E    M+    I    EH  C+V
Sbjct: 461 TRPNSVTFLGILSACSHAGLVHRGWEFFNAMSNIYAIQPALEHYVCMV 508



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/102 (34%), Positives = 59/102 (57%)
 Frame = -3

Query: 342 PAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLF 163
           P  + V  N++++   ++GD+DGARR FE++P K +VVSWNA++ G A H R  EA  LF
Sbjct: 64  PERNVVSWNSMIAGLIRNGDLDGARRVFEQMPMK-NVVSWNAMISGYAEHCRMEEARVLF 122

Query: 162 EAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQEI 37
           + M    + + +T    ++    +G VD    + + M E+ +
Sbjct: 123 DEM---VDRNVITWTSMISGYCRSGNVDEGYSLFQKMPERNV 161


>ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 687

 Score =  125 bits (313), Expect = 8e-27
 Identities = 65/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   EA     + R++G +P     + LLGA G+++ L+ G Q HGL+ K +   D  +
Sbjct: 378 NELFAEATDIFFKMRSEGVSPLSSTYSVLLGAAGAMSYLDSGRQFHGLLTKTHYELDLFI 437

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N+L+SMYAK G++D A RAF  +  + D++SWN+++MG + HG   + L++FEAM +  
Sbjct: 438 SNSLISMYAKCGEIDDAYRAFSNMSFR-DLISWNSMIMGFSDHGLTDKTLKIFEAMVQSG 496

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAE-QEIPAGPEHLACVV 4
            +P++VT LG L+AC HAG+V +  E +  M++   I   PEH  C++
Sbjct: 497 TQPNSVTFLGILSACSHAGLVHKGWEFINAMSDVYGIQPAPEHCICMI 544



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/104 (37%), Positives = 55/104 (52%)
 Frame = -3

Query: 348 VNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALR 169
           + P  + V  NA++S Y +SG +    R FEE+P K+ VVSW  ++ GLA  GR  EA R
Sbjct: 36  IMPERNVVSYNAMLSGYLRSGRLSEGCRFFEEMPEKN-VVSWTLVLCGLADAGRVEEARR 94

Query: 168 LFEAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQEI 37
           LFEAM    E + V+    +      G V+ A EV   M  + +
Sbjct: 95  LFEAM---PERNIVSWNSMIGGLVKNGDVEGAREVFERMPVKNV 135


>ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Brachypodium distachyon]
          Length = 531

 Score =  124 bits (310), Expect = 2e-26
 Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
 Frame = -3

Query: 495 RMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRN 316
           R  +A     E +  G  P +  L S+LGA   +  LE+G+ VHG +      AD  + N
Sbjct: 268 RYVQALEVFREMQDSGVEPTELTLVSVLGACAEIGELELGKGVHGYIGSKGVVADGYVGN 327

Query: 315 ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKAEP 136
           ALV MYAK G ++ AR+ FE +  + D+  WNA+++G + HG + +AL LF+AMR   EP
Sbjct: 328 ALVDMYAKCGSLELARQLFESMSTR-DITCWNAMIVGFSVHGYSRKALELFDAMR--VEP 384

Query: 135 DAVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
           D VT LG L AC H G+VD      R M E  +I  G +H  C+V
Sbjct: 385 DHVTFLGVLIACSHGGLVDEGRVYFRSMTEDYKIVPGVKHYGCMV 429



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = -3

Query: 429 ALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVSMYAKSGDMDGARRAFEEL 250
           AL +  GA G +  +E       L+++  P       NA ++ +A+ GDM+ A R F E+
Sbjct: 196 ALVAAHGATGDLHGVE-------LLSREMPERSVSWWNAEITRHARVGDMEAAARVFREM 248

Query: 249 PAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGK-AEPDAVTCLGALTACDHAGMVDRA 73
           P + D VSWN+++ G    GR  +AL +F  M+    EP  +T +  L AC   G ++  
Sbjct: 249 PGR-DAVSWNSLIGGYTKLGRYVQALEVFREMQDSGVEPTELTLVSVLGACAEIGELELG 307

Query: 72  EEVLRFMAEQEIPA 31
           + V  ++  + + A
Sbjct: 308 KGVHGYIGSKGVVA 321



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 48/144 (33%), Positives = 69/144 (47%)
 Frame = -3

Query: 483 AFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVS 304
           AF AL +S A  F       A+  G  G V++   G ++HG V K+    D  ++NALVS
Sbjct: 115 AFPALLKSCARAFG---LCAAADGGGEGFVSK---GMELHGRVLKLGCGGDRYVQNALVS 168

Query: 303 MYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKAEPDAVT 124
           MY K G +  AR+ F+ +PA+ + VSWNA+V   A HG   +   +    R   E     
Sbjct: 169 MYGKLGRLGDARKVFDGMPAR-NAVSWNALV---AAHGATGDLHGVELLSREMPERSVSW 224

Query: 123 CLGALTACDHAGMVDRAEEVLRFM 52
               +T     G ++ A  V R M
Sbjct: 225 WNAEITRHARVGDMEAAARVFREM 248


>ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512766|gb|AES94389.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 735

 Score =  123 bits (309), Expect = 2e-26
 Identities = 73/170 (42%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKV--NPAADP 328
           NE + EA    AE  A G +P +   A L GAVGSVA L++G Q+H +  K       D 
Sbjct: 441 NELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDV 500

Query: 327 VLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-R 151
            L N+L+SMYAK G+++ A R F  +  + D +SWN+++MGL+ HGRA EAL ++E M  
Sbjct: 501 YLENSLISMYAKCGEIEDAYRIFSNMNCR-DKISWNSMIMGLSDHGRANEALNMYETMLE 559

Query: 150 GKAEPDAVTCLGALTACDHAGMVDRAEEVLRFMA-EQEIPAGPEHLACVV 4
               PDAVT LG LTAC HAG VD+  E+   M  +  +  G EH   ++
Sbjct: 560 FGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSII 609


>ref|XP_006605795.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 766

 Score =  123 bits (308), Expect = 3e-26
 Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE + EAF    E  A G +P     A L GA+GSVA L+ G Q+HG+  K     D +L
Sbjct: 481 NELIAEAFCLFVEMMAHGVSPMSSTYAVLFGAMGSVAYLDQGRQLHGMQLKTVYVYDLIL 540

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
            N+L++MY K G++D A R F  +  + D +SWN ++MGL+ HG A +AL+++E M    
Sbjct: 541 ENSLIAMYTKCGEIDDAYRIFSNMTYR-DKISWNTMIMGLSDHGMANKALKVYETMLEFG 599

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEV-LRFMAEQEIPAGPEHLACVV 4
             PD +T LG LTAC HAG+VD+  E+ L  +    I  G EH   ++
Sbjct: 600 IYPDGLTFLGVLTACAHAGLVDKGWELFLAMVNAYAIQPGLEHYVSII 647



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/128 (32%), Positives = 65/128 (50%)
 Frame = -3

Query: 420 SLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAK 241
           ++LG      R+E  ++V   +    P  + V  NA+V    ++GD++ AR  FEE P K
Sbjct: 181 AMLGGFSDAGRIEDAKKVFDEM----PERNVVSWNAMVVALVRNGDLEEARIVFEETPYK 236

Query: 240 HDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVL 61
           + VVSWNA++ G    GR  EA  LFE M  +   + VT    ++     G ++ A  + 
Sbjct: 237 N-VVSWNAMIAGYVERGRMNEARELFEKMEFR---NVVTWTSMISGYCREGNLEGAYCLF 292

Query: 60  RFMAEQEI 37
           R M E+ +
Sbjct: 293 RAMPEKNV 300


>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  122 bits (306), Expect = 5e-26
 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           E+A A L +  ++GF P  YA +S+L +   VA L+ G Q H L  K+   ++    NAL
Sbjct: 394 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 453

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-EPD 133
           ++MY+K G M  AR AF+ +   HDV SWN+++ G A HG A +AL +F  MR    +PD
Sbjct: 454 INMYSKCGQMGSARLAFDVMHT-HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 512

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             T LG L  C+H+GMV+  E   R M +Q      P H AC++
Sbjct: 513 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMI 556



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           N R E A A  A+    G AP D+A  + L A   +  L  GEQVH L  +   A D  +
Sbjct: 92  NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 151

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGR---AAEALRLFEAMR 151
            + L+ MY++ G +  A+  F+ + +  DVV + +++     +G    AAEA  L + ++
Sbjct: 152 GSCLIEMYSRCGSLPAAKEVFDRMDSP-DVVGYTSLISAFCRNGEFELAAEA--LIQMLK 208

Query: 150 GKAEPDAVTCLGALTAC 100
              +P+  T    LTAC
Sbjct: 209 QGLKPNEHTMTTILTAC 225



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
 Frame = -3

Query: 495 RMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRN 316
           R+EEA     +  ++G  P ++AL+ +LGA GS+    +G Q+H    K +   D  + N
Sbjct: 294 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSN 350

Query: 315 ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-E 139
           AL+SMY ++G ++       ++    D+VSW   +     +G   +A+ L   M  +   
Sbjct: 351 ALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 409

Query: 138 PDAVTCLGALTACDHAGMVDRAEE----VLRFMAEQEIPAG 28
           P+       L++C     +D+  +     L+   + EI  G
Sbjct: 410 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHG-LVAKVNPAADPV 325
           N   E A  AL +    G  P ++ + ++L A   V    +G+Q+HG L+ K+   +  V
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSV 248

Query: 324 LRN-ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRG 148
             + AL+  Y+++G+   A+  F+ L  K+ VVSW +++      GR  EAL++F  M  
Sbjct: 249 YSSTALIDFYSRNGEFKLAKAVFDSLHCKN-VVSWCSMMQLYIRDGRLEEALQVFGDMIS 307

Query: 147 K-AEPDAVTCLGALTACDHAGM 85
           +  +P+       L AC   G+
Sbjct: 308 EGVDPNEFALSIVLGACGSIGL 329


>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  122 bits (306), Expect = 5e-26
 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           E+A A L +  ++GF P  YA +S+L +   VA L+ G Q H L  K+   ++    NAL
Sbjct: 348 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 407

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-EPD 133
           ++MY+K G M  AR AF+ +   HDV SWN+++ G A HG A +AL +F  MR    +PD
Sbjct: 408 INMYSKCGQMGSARLAFDVMHT-HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 466

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             T LG L  C+H+GMV+  E   R M +Q      P H AC++
Sbjct: 467 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMI 510



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           N R E A A  A+    G AP D+A  + L A   +  L  GEQVH L  +   A D  +
Sbjct: 92  NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 151

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGR---AAEALRLFEAMR 151
            + L+ MY++ G +  A+  F+ + +  DVV + +++     +G    AAEA  L + ++
Sbjct: 152 GSCLIEMYSRCGSLPAAKEVFDRMDSP-DVVGYTSLISAFCRNGEFELAAEA--LIQMLK 208

Query: 150 GKAEPDAVTCLGALTAC 100
              +P+  T    LTAC
Sbjct: 209 QGLKPNEHTMTTILTAC 225


>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  122 bits (306), Expect = 5e-26
 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           E+A A L +  ++GF P  YA +S+L +   VA L+ G Q H L  K+   ++    NAL
Sbjct: 321 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 380

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-EPD 133
           ++MY+K G M  AR AF+ +   HDV SWN+++ G A HG A +AL +F  MR    +PD
Sbjct: 381 INMYSKCGQMGSARLAFDVMHT-HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 439

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             T LG L  C+H+GMV+  E   R M +Q      P H AC++
Sbjct: 440 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMI 483



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           N R E A A  A+    G AP D+A  + L A   +  L  GEQVH L  +   A D  +
Sbjct: 19  NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 78

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGR---AAEALRLFEAMR 151
            + L+ MY++ G +  A+  F+ + +  DVV + +++     +G    AAEA  L + ++
Sbjct: 79  GSCLIEMYSRCGSLPAAKEVFDRMDSP-DVVGYTSLISAFCRNGEFELAAEA--LIQMLK 135

Query: 150 GKAEPDAVTCLGALTAC 100
              +P+  T    LTAC
Sbjct: 136 QGLKPNEHTMTTILTAC 152



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
 Frame = -3

Query: 495 RMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRN 316
           R+EEA     +  ++G  P ++AL+ +LGA GS+    +G Q+H    K +   D  + N
Sbjct: 221 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSN 277

Query: 315 ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-E 139
           AL+SMY ++G ++       ++    D+VSW   +     +G   +A+ L   M  +   
Sbjct: 278 ALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 336

Query: 138 PDAVTCLGALTACDHAGMVDRAEE----VLRFMAEQEIPAG 28
           P+       L++C     +D+  +     L+   + EI  G
Sbjct: 337 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 377



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHG-LVAKVNPAADPV 325
           N   E A  AL +    G  P ++ + ++L A   V    +G+Q+HG L+ K+   +  V
Sbjct: 120 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSV 175

Query: 324 LRN-ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRG 148
             + AL+  Y+++G+   A+  F+ L  K+ VVSW +++      GR  EAL++F  M  
Sbjct: 176 YSSTALIDFYSRNGEFKLAKAVFDSLHCKN-VVSWCSMMQLYIRDGRLEEALQVFGDMIS 234

Query: 147 K-AEPDAVTCLGALTACDHAGM 85
           +  +P+       L AC   G+
Sbjct: 235 EGVDPNEFALSIVLGACGSIGL 256


>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
           gi|41469627|gb|AAS07350.1| putative pentatricopeptide
           repeat domain contianing protein [Oryza sativa Japonica
           Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
           sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  122 bits (306), Expect = 5e-26
 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           E+A A L +  ++GF P  YA +S+L +   VA L+ G Q H L  K+   ++    NAL
Sbjct: 394 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 453

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-EPD 133
           ++MY+K G M  AR AF+ +   HDV SWN+++ G A HG A +AL +F  MR    +PD
Sbjct: 454 INMYSKCGQMGSARLAFDVMHT-HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 512

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             T LG L  C+H+GMV+  E   R M +Q      P H AC++
Sbjct: 513 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMI 556



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           N R E A A  A+    G AP D+A  + L A   +  L  GEQVH L  +   A D  +
Sbjct: 92  NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 151

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGR---AAEALRLFEAMR 151
            + L+ MY++ G +  A+  F+ + +  DVV + +++     +G    AAEA  L + ++
Sbjct: 152 GSCLIEMYSRCGSLPAAKEVFDRMDSP-DVVGYTSLISAFCRNGEFELAAEA--LIQMLK 208

Query: 150 GKAEPDAVTCLGALTAC 100
              +P+  T    LTAC
Sbjct: 209 QGLKPNEHTMTTILTAC 225



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
 Frame = -3

Query: 495 RMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRN 316
           R+EEA     +  ++G  P ++AL+ +LGA GS+    +G Q+H    K +   D  + N
Sbjct: 294 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSN 350

Query: 315 ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA-E 139
           AL+SMY ++G ++       ++    D+VSW   +     +G   +A+ L   M  +   
Sbjct: 351 ALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 409

Query: 138 PDAVTCLGALTACDHAGMVDRAEE----VLRFMAEQEIPAG 28
           P+       L++C     +D+  +     L+   + EI  G
Sbjct: 410 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHG-LVAKVNPAADPV 325
           N   E A  AL +    G  P ++ + ++L A   V    +G+Q+HG L+ K+   +  V
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSV 248

Query: 324 LRN-ALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRG 148
             + AL+  Y+++G+   A+  F+ L  K+ VVSW +++      GR  EAL++F  M  
Sbjct: 249 YSSTALIDFYSRNGEFKLAKAVFDSLHCKN-VVSWCSMMQLYIRDGRLEEALQVFGDMIS 307

Query: 147 K-AEPDAVTCLGALTACDHAGM 85
           +  +P+       L AC   G+
Sbjct: 308 EGVDPNEFALSIVLGACGSIGL 329


>ref|XP_003576330.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18840-like [Brachypodium distachyon]
          Length = 535

 Score =  120 bits (302), Expect = 1e-25
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
 Frame = -3

Query: 483 AFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVS 304
           A     E +  G  P +  L S+LGA   +  LE+G+ VHG ++     AD  + NALV 
Sbjct: 272 ALKVFREMQDSGVEPTELTLVSVLGACTEIGELELGKGVHGYLSSKGVLADGYVGNALVD 331

Query: 303 MYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKAEPDAVT 124
           MYAK G ++ AR+ FE +  + D+  WNA+++GL+ HG + EAL LF  MR   EPD VT
Sbjct: 332 MYAKCGSLELARQVFESMSTR-DITCWNAMIVGLSVHGYSREALELFNVMR--VEPDHVT 388

Query: 123 CLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
            LG L  C H+G+VD      R M E  +I  G +H  C+V
Sbjct: 389 FLGVLIVCSHSGLVDEGRVXFRSMTEDYKIVPGVKHYGCMV 429



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = -3

Query: 318 NALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGK-A 142
           NA ++ +A+ GDM+ A R F E+P + D VSWN+++   A  G+ A AL++F  M+    
Sbjct: 226 NAEITRHARVGDMEAAARVFREMPGR-DAVSWNSLIGSYAKLGQCARALKVFREMQDSGV 284

Query: 141 EPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQEIPA 31
           EP  +T +  L AC   G ++  + V  +++ + + A
Sbjct: 285 EPTELTLVSVLGACTEIGELELGKGVHGYLSSKGVLA 321



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/110 (38%), Positives = 62/110 (56%)
 Frame = -3

Query: 483 AFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVS 304
           AF AL +S A  F   +   A+  G  G V++   G ++HG V K+   AD  ++NALVS
Sbjct: 115 AFPALLKSCARAF---NLCAAADGGGEGFVSK---GMELHGCVLKLGCGADRYVQNALVS 168

Query: 303 MYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM 154
           MY K G +  AR+ F+ +PA+ + VSWNA+V      G +  A R+ + M
Sbjct: 169 MYGKLGRLGDARKVFDGMPAR-NAVSWNALVAAHGDVGDSRGAERVSQEM 217


>gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 623

 Score =  120 bits (301), Expect = 2e-25
 Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           ++A     E R  G     +   S+LGA+G+ + LE G+Q+H L+ K   A +P ++N L
Sbjct: 361 DKAMKCFVEMRQAGINIDFFTFTSMLGAIGNSSALEGGKQMHALILKTGNALNPYVQNGL 420

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMR-GKAEPD 133
           VSMYA+ G ++ ++  F  L  +HDV+SWN+++ G AHHG   EAL LFE MR  +  PD
Sbjct: 421 VSMYARCGVINDSKMVF-SLMEEHDVISWNSLLSGCAHHGYGREALELFEQMRKTEITPD 479

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFM---AEQEIPAGPEHLACVV 4
           + T L  L+AC H G +D+  E    M   A  E+P G EH A V+
Sbjct: 480 STTFLAVLSACSHVGFLDKGLEYFELMKNDALLELP-GVEHYAAVI 524


>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
          Length = 664

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   EA    +E R  G +P +   + LLGA G++A L+ G Q H L+ K     D +L
Sbjct: 364 NELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLIL 423

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
           +N+L+SMYAK G++  A   F ++ ++ D++SWN+++MG +HHG  +EAL++FEAM    
Sbjct: 424 QNSLISMYAKCGEIGDAYSIFSKMISR-DLISWNSMIMGFSHHGLTSEALKVFEAMLTSG 482

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             P++VT LG L+AC HAG++++  E+   M++   I    EH  C+V
Sbjct: 483 THPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMV 530



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/100 (34%), Positives = 53/100 (53%)
 Frame = -3

Query: 351 KVNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEAL 172
           ++ P  + V  NA++S Y + G +  A R FEE+P ++ VVSW +++ GLA+ GR  EA 
Sbjct: 100 EIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERN-VVSWTSLLCGLANAGRIGEAR 158

Query: 171 RLFEAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFM 52
            LF  M    E + V+    L     +G ++ A  V   M
Sbjct: 159 ELFNVM---PERNVVSWNSMLVGLIRSGQLEEARRVFNEM 195


>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Vitis vinifera]
          Length = 743

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501 NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
           NE   EA    +E R  G +P +   + LLGA G++A L+ G Q H L+ K     D +L
Sbjct: 443 NELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLIL 502

Query: 321 RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAM-RGK 145
           +N+L+SMYAK G++  A   F ++ ++ D++SWN+++MG +HHG  +EAL++FEAM    
Sbjct: 503 QNSLISMYAKCGEIGDAYSIFSKMISR-DLISWNSMIMGFSHHGLTSEALKVFEAMLTSG 561

Query: 144 AEPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
             P++VT LG L+AC HAG++++  E+   M++   I    EH  C+V
Sbjct: 562 THPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMV 609



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/100 (34%), Positives = 53/100 (53%)
 Frame = -3

Query: 351 KVNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEAL 172
           ++ P  + V  NA++S Y + G +  A R FEE+P ++ VVSW +++ GLA+ GR  EA 
Sbjct: 100 EIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERN-VVSWTSLLCGLANAGRIGEAR 158

Query: 171 RLFEAMRGKAEPDAVTCLGALTACDHAGMVDRAEEVLRFM 52
            LF  M    E + V+    L     +G ++ A  V   M
Sbjct: 159 ELFNVM---PERNVVSWNSMLVGLIRSGQLEEARRVFNEM 195


>gb|EOY06182.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 632

 Score =  119 bits (297), Expect = 5e-25
 Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           EE F      +  GF+P +    S+L    ++  L++G+Q H  V K        + NAL
Sbjct: 362 EEGFKIFIRMKESGFSPDEATFTSILTISSNLPSLDLGKQSHAQVVKSGLNNFTAVSNAL 421

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMR-GKAEPD 133
           V+MY + GD+  A R F  +P+ HDV+SWN+I+ G AHHG A +AL++FE MR    +P+
Sbjct: 422 VTMYERCGDLHSALREFFNMPS-HDVISWNSIICGFAHHGNAEKALKMFELMRLTDIKPN 480

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
            +T +G L+AC HAG+VD+ +    +M  +  +    EH  C+V
Sbjct: 481 QITFIGVLSACSHAGLVDQGKYYFDYMKNKCSLEPTTEHYTCIV 524


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  119 bits (297), Expect = 5e-25
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
 Frame = -3

Query: 489 EEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNAL 310
           E+A     E R        Y   SLLGA+G+   +E G ++H L+ K   A+   ++N L
Sbjct: 344 EDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGL 403

Query: 309 VSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMR-GKAEPD 133
           VSMYA+ G +D ++R F  L   HDVVSWNA++ G AHHG   EA+ LFE MR  K +P+
Sbjct: 404 VSMYARCGAIDDSKRVF-WLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPN 462

Query: 132 AVTCLGALTACDHAGMVDRAEEVLRFMAEQEI--PAGPEHLACVV 4
           + T L  L+AC H G VD+  E   FM       P   EH A VV
Sbjct: 463 STTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVV 507


>gb|ESW08896.1| hypothetical protein PHAVU_009G083700g [Phaseolus vulgaris]
          Length = 988

 Score =  118 bits (296), Expect = 7e-25
 Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = -3

Query: 501  NERMEEAFAALAESRADGFAPGDYALASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVL 322
            N + ++A +   + R     P +Y  A+L+ A   +  LE G Q+H  + K+N A DP +
Sbjct: 594  NGQEDQALSTYHQMRLSRVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV 653

Query: 321  RNALVSMYAKSGDMDGARRAFEELPAKHDVVSWNAIVMGLAHHGRAAEALRLFEAMRGKA 142
              +LV MYAK G+++ AR  F  +  K  + SWNA+++GLA HG A EALR F+ M+ + 
Sbjct: 654  MTSLVDMYAKCGNIEEARGLFRRMNTKR-IASWNAMIVGLAQHGNAEEALRFFKDMKSRG 712

Query: 141  -EPDAVTCLGALTACDHAGMVDRAEEVLRFMAEQ-EIPAGPEHLACVV 4
              PD VT +G L+AC H+G++  A E    M +   I  G EH +C+V
Sbjct: 713  LLPDRVTFIGVLSACSHSGLISEAYENFYSMQKNYGIEPGIEHYSCLV 760



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -3

Query: 417 LLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVSMYAKSGDMDGARRAFEELPAKH 238
           +L    S+  LE+G+Q+HG V ++       + N+L++MY KSG +  AR  F ++  + 
Sbjct: 320 MLSVAASLNCLELGKQIHGAVVRMELDQVVSVGNSLINMYVKSGSVSRARSVFSQM-NEV 378

Query: 237 DVVSWNAIVMGLAHHGRAAEALRLF-EAMRGKAEPDAVTCLGALTAC 100
           D++SWN I+ G A +G    ++  F + +R    PD  T    L AC
Sbjct: 379 DLISWNTIISGSALNGLEECSVGFFVDLLRDGLLPDQFTIASVLRAC 425



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = -3

Query: 426 LASLLGAVGSVARLEIGEQVHGLVAKVNPAADPVLRNALVSMYAKSGDMDGARRAFEELP 247
           LA+   A G +  L  G+Q+H +V K     D  + + ++ MY K G+++ A R F E+ 
Sbjct: 518 LANAAKAAGGLVGLLQGKQIHAVVVKRGFNLDLFVLSGVLDMYLKCGEVESASRVFSEIS 577

Query: 246 AKHDVVSWNAIVMGLAHHGRAAEALRLFEAMR-GKAEPDAVTCLGALTACDHAGMVDRAE 70
           +  D V+W  ++ G   +G+  +AL  +  MR  + +PD  T    + AC     +++  
Sbjct: 578 SPDD-VAWTTMISGCVENGQEDQALSTYHQMRLSRVQPDEYTFATLVKACSLLTALEQGR 636

Query: 69  EV 64
           ++
Sbjct: 637 QI 638