BLASTX nr result
ID: Zingiber25_contig00034982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00034982
(618 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ... 177 2e-42
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi... 177 3e-42
ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containi... 176 6e-42
gb|EXB52989.1| hypothetical protein L484_018873 [Morus notabilis] 175 8e-42
ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containi... 175 8e-42
gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus... 175 8e-42
ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containi... 175 8e-42
ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containi... 174 2e-41
ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group] g... 174 2e-41
gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonic... 174 2e-41
ref|XP_004984577.1| PREDICTED: pentatricopeptide repeat-containi... 174 2e-41
gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indi... 174 2e-41
ref|XP_006428236.1| hypothetical protein CICLE_v10011195mg [Citr... 173 3e-41
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi... 173 4e-41
emb|CBI39641.3| unnamed protein product [Vitis vinifera] 173 4e-41
ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containi... 170 3e-40
ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40
ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40
gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus pe... 169 6e-40
ref|XP_002319471.1| pentatricopeptide repeat-containing family p... 169 6e-40
>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 707
Score = 177 bits (450), Expect = 2e-42
Identities = 77/96 (80%), Positives = 89/96 (92%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+F LHDVDEEEK H+L YHSERLAVA+G+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 612 REAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCH 671
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG+CSC+D+W
Sbjct: 672 SAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 177 bits (448), Expect = 3e-42
Identities = 77/96 (80%), Positives = 88/96 (91%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+F LHDVDEEEK H+L YHSE+LAVA+G+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 616 REAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCH 675
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSC+DYW
Sbjct: 676 SAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
>ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum tuberosum]
Length = 704
Score = 176 bits (445), Expect = 6e-42
Identities = 76/96 (79%), Positives = 89/96 (92%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+FALHDV+EEEK H+L YHSE+LAVA+G+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 609 REAGYIPDGSFALHDVEEEEKLHSLNYHSEKLAVAYGLLKLPEGMPIRVMKNLRVCGDCH 668
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSC+D+W
Sbjct: 669 SAIKLIAKVTGREIILRDANRFHHFKDGVCSCKDFW 704
>gb|EXB52989.1| hypothetical protein L484_018873 [Morus notabilis]
Length = 713
Score = 175 bits (444), Expect = 8e-42
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG F LHDVDEEEK H+LRYHSERLAVA+G+LK+PE +PIRVMKNLRVC DCH
Sbjct: 618 REAGYCPDGTFVLHDVDEEEKVHSLRYHSERLAVAYGLLKVPEPMPIRVMKNLRVCVDCH 677
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSCRDYW
Sbjct: 678 SAIKLIAKVTGREIILRDANRFHHFKDGLCSCRDYW 713
>ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Oryza brachyantha]
Length = 733
Score = 175 bits (444), Expect = 8e-42
Identities = 78/94 (82%), Positives = 87/94 (92%)
Frame = +2
Query: 8 AGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCHSA 187
+GYS DG+F LHD+DEE+KAH+LRYHSER AVA+G+LKIPEG+PIRVMKNLRVCGDCHSA
Sbjct: 640 SGYSADGSFVLHDIDEEQKAHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 699
Query: 188 IKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
IKLIAKIT R IILRD NRFHHF+DG CSCRDYW
Sbjct: 700 IKLIAKITAREIILRDANRFHHFKDGFCSCRDYW 733
>gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus vulgaris]
Length = 709
Score = 175 bits (444), Expect = 8e-42
Identities = 76/96 (79%), Positives = 88/96 (91%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+F LHDVDEEEK H+L YHSE+LAVA+G+LK+P+G+PIRVMKNLRVCGDCH
Sbjct: 614 REAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPKGMPIRVMKNLRVCGDCH 673
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSC+DYW
Sbjct: 674 SAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 709
>ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cicer arietinum]
Length = 707
Score = 175 bits (444), Expect = 8e-42
Identities = 76/96 (79%), Positives = 88/96 (91%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+F LHDVDEEEK H+L YHSE+LAVA+G+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 612 REAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCH 671
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSC+D+W
Sbjct: 672 SAIKLIAKVTGREIILRDANRFHHFKDGYCSCKDFW 707
>ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 1224
Score = 174 bits (441), Expect = 2e-41
Identities = 74/96 (77%), Positives = 89/96 (92%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+FALHDV+EEEK H+L YHSE+LAVA+G+LK+P+G+PIR+MKNLRVCGDCH
Sbjct: 1129 REAGYIPDGSFALHDVEEEEKLHSLNYHSEKLAVAYGLLKLPQGMPIRIMKNLRVCGDCH 1188
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR IILRD NRFHHF+DG CSC+D+W
Sbjct: 1189 SAIKLIAKVTGREIILRDANRFHHFKDGVCSCKDFW 1224
>ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa
Japonica Group]
Length = 706
Score = 174 bits (441), Expect = 2e-41
Identities = 77/94 (81%), Positives = 87/94 (92%)
Frame = +2
Query: 8 AGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCHSA 187
+GYS DG+F LHD+DEE+K+H+LRYHSER AVA+G+LKIPEG+PIRVMKNLRVCGDCHSA
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672
Query: 188 IKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
IKLIAKIT R IILRD NRFHHF+DG CSCRDYW
Sbjct: 673 IKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
>gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein
OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 174 bits (441), Expect = 2e-41
Identities = 77/94 (81%), Positives = 87/94 (92%)
Frame = +2
Query: 8 AGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCHSA 187
+GYS DG+F LHD+DEE+K+H+LRYHSER AVA+G+LKIPEG+PIRVMKNLRVCGDCHSA
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672
Query: 188 IKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
IKLIAKIT R IILRD NRFHHF+DG CSCRDYW
Sbjct: 673 IKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
>ref|XP_004984577.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Setaria italica]
Length = 706
Score = 174 bits (440), Expect = 2e-41
Identities = 77/94 (81%), Positives = 86/94 (91%)
Frame = +2
Query: 8 AGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCHSA 187
+GYS DG+F LHDVDEE+K H+LRYHSER AVA+G+LK+PEG+PIRVMKNLRVCGDCHSA
Sbjct: 613 SGYSADGSFVLHDVDEEQKTHSLRYHSERQAVAYGLLKVPEGMPIRVMKNLRVCGDCHSA 672
Query: 188 IKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
IKLIAKIT R IILRD NRFHHF+DG CSCRDYW
Sbjct: 673 IKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
>gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 174 bits (440), Expect = 2e-41
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +2
Query: 8 AGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCHSA 187
+GYS DG+F LHD+DEE+K+H+LRYHSER AVA+G+LKIPEG+PIRVMKNLRVCGDCHSA
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672
Query: 188 IKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
IKLIAKIT R I+LRD NRFHHF+DG CSCRDYW
Sbjct: 673 IKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
>ref|XP_006428236.1| hypothetical protein CICLE_v10011195mg [Citrus clementina]
gi|568854166|ref|XP_006480704.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Citrus sinensis]
gi|557530293|gb|ESR41476.1| hypothetical protein
CICLE_v10011195mg [Citrus clementina]
Length = 703
Score = 173 bits (439), Expect = 3e-41
Identities = 75/96 (78%), Positives = 87/96 (90%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK H+LRYHSE+LAVA+G++K+PEG+PIRVMKNLRVCGDCH
Sbjct: 608 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 667
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLI+K+ GR IILRD NRFHHF+DG CSCRDYW
Sbjct: 668 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 703
>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 173 bits (438), Expect = 4e-41
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK +L +HSERLAVAFG+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 608 REAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCH 667
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAKITGR IILRD NRFHHF+DG CSCRDYW
Sbjct: 668 SAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
>emb|CBI39641.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 173 bits (438), Expect = 4e-41
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK +L +HSERLAVAFG+LK+PEG+PIRVMKNLRVCGDCH
Sbjct: 156 REAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCH 215
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAKITGR IILRD NRFHHF+DG CSCRDYW
Sbjct: 216 SAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 251
>ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 703
Score = 170 bits (431), Expect = 3e-40
Identities = 73/96 (76%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK +L YHSE+LA+A+G+LK+P+G+PIRVMKNLRVCGDCH
Sbjct: 608 REAGYCPDSSFVLHDVDEEEKVQSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRVCGDCH 667
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIAK+TGR II+RD NRFHHF+DG CSCRDYW
Sbjct: 668 SAIKLIAKVTGREIIVRDANRFHHFKDGLCSCRDYW 703
>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 169 bits (429), Expect = 4e-40
Identities = 75/96 (78%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK +L YHSE+LAVA+G+LKIP G+PIRVMKNLRVCGDCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
+AIKLIAK+TGR IILRD NRFHHF+DG+CSCRDYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
>ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 169 bits (429), Expect = 4e-40
Identities = 75/96 (78%), Positives = 86/96 (89%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHDVDEEEK +L YHSE+LAVA+G+LKIP G+PIRVMKNLRVCGDCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
+AIKLIAK+TGR IILRD NRFHHF+DG+CSCRDYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
>gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus persica]
Length = 631
Score = 169 bits (428), Expect = 6e-40
Identities = 70/96 (72%), Positives = 87/96 (90%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PD +F LHD++EEEKAH+L YHSE+LA+A+G+LK+P+G+PIRVMKNLR+CGDCH
Sbjct: 536 REAGYCPDASFVLHDLEEEEKAHSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRICGDCH 595
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLI+K+ GR +ILRD NRFHHF+DG CSCRDYW
Sbjct: 596 SAIKLISKVMGREVILRDANRFHHFKDGLCSCRDYW 631
>ref|XP_002319471.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222857847|gb|EEE95394.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 703
Score = 169 bits (428), Expect = 6e-40
Identities = 72/96 (75%), Positives = 87/96 (90%)
Frame = +2
Query: 2 KTAGYSPDGAFALHDVDEEEKAHNLRYHSERLAVAFGILKIPEGLPIRVMKNLRVCGDCH 181
+ AGY PDG+F +HDVDEE+K H+LR+HSE++AVA+G+LK+P G PIRVMKNLRVCGDCH
Sbjct: 608 REAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCH 667
Query: 182 SAIKLIAKITGRTIILRDTNRFHHFRDGACSCRDYW 289
SAIKLIA++TGR IILRD NRFHHF+DG CSCRD+W
Sbjct: 668 SAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703