BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034884
         (468 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39676.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...    67   3e-09
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]    67   3e-09
ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A...    66   5e-09
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor...    64   2e-08
gb|EOY11782.1| Phytochrome interacting factor 3, putative isofor...    64   2e-08
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor...    64   2e-08
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor...    64   2e-08
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...    63   5e-08
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...    55   1e-05

>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/117 (35%), Positives = 66/117 (56%)
 Frame = -2

Query: 353 WMMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSP 174
           + M +G+  +  + TN   DL   P+++F ELVWE GQI+MQ QS++ RKS  +S+ F  
Sbjct: 7   YRMAKGKPESVQQKTN---DLSFGPENDFVELVWEGGQIMMQGQSSRARKSP-LSNSFPS 62

Query: 173 RYGTVQEKESREKVGSGHPPSRHSANNGANAQDDDVVSWISYPIEEILPSETLQNDY 3
                ++K+           + H  N+    QDDD+V W++YPI+     E+LQ+DY
Sbjct: 63  HTPKPRDKD-----------TGHGTNSKMGNQDDDMVPWLNYPID-----ESLQHDY 103


>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
 Frame = -2

Query: 353 WMMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSP 174
           + M +G+  +  + TN   DL   P+++F ELVWE GQI+MQ QS++ RKS  +S+ F  
Sbjct: 7   YRMAKGKPESVQQKTN---DLSFGPENDFVELVWEGGQIMMQGQSSRARKSP-LSNSFPS 62

Query: 173 RYGTVQEKE----SREKVG---------SGHPPSRHSANNGANAQDDDVVSWISYPIEEI 33
                ++K+    +  K+G         +  P S  SA  G  +QDDD+V W++YPI+  
Sbjct: 63  HTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGL-SQDDDMVPWLNYPID-- 119

Query: 32  LPSETLQNDY 3
              E+LQ+DY
Sbjct: 120 ---ESLQHDY 126


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
 Frame = -2

Query: 353 WMMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSP 174
           + M +G+  +  + TN   DL   P+++F ELVWE GQI+MQ QS++ RKS  +S+ F  
Sbjct: 7   YRMAKGKPESVQQKTN---DLSFGPENDFVELVWEGGQIMMQGQSSRARKSP-LSNSFPS 62

Query: 173 RYGTVQEKE----SREKVG---------SGHPPSRHSANNGANAQDDDVVSWISYPIEEI 33
                ++K+    +  K+G         +  P S  SA  G  +QDDD+V W++YPI+  
Sbjct: 63  HTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGL-SQDDDMVPWLNYPID-- 119

Query: 32  LPSETLQNDY 3
              E+LQ+DY
Sbjct: 120 ---ESLQHDY 126


>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
           gi|548842109|gb|ERN02066.1| hypothetical protein
           AMTR_s00045p00141060 [Amborella trichopoda]
          Length = 781

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/90 (38%), Positives = 51/90 (56%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSPR 171
           M ++  +  +PKMTN S+DL  +PD EF EL+WENGQI++Q Q+++ RK +  SSG+   
Sbjct: 1   MTKEKWDFAQPKMTNCSTDLAFVPDHEFVELLWENGQIVLQGQTSRNRKDAS-SSGY--- 56

Query: 170 YGTVQEKESREKVGSGHPPSRHSANNGANA 81
                         S HPP  H  +N  +A
Sbjct: 57  --------------SSHPPKTHLNHNSGDA 72



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 23/116 (19%)
 Frame = -2

Query: 281 PDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSP-----------------------R 171
           PD EF EL+WENGQI++Q Q+++ RK +  SSG+S                        R
Sbjct: 110 PDHEFVELLWENGQIVLQGQTSRNRKDAS-SSGYSSHPPKTHLNHNSGDAVLPVASKGGR 168

Query: 170 YGTVQEKESREKVGSGHPPSRHSANNGANAQDDDVVSWISYPIEEILPSETLQNDY 3
           YGT++           H  S   A+     Q+D++V W++YP++     ++L+ DY
Sbjct: 169 YGTLESVL--------HDFSSGQASGCPLVQEDEMVPWLNYPLD-----DSLERDY 211


>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
           cacao]
          Length = 730

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRK--------SSC 195
           M R   ++++ K  + S+DL  +P+++F ELV ENGQILMQ QS+K R+        S C
Sbjct: 9   MARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPACNSLPSHC 68

Query: 194 VSSGFSPR-------YGTVQEKESR----EKVGSGHPPSRHSANNGANAQDDDVVSWISY 48
           + S  +P+        G    K  +    + V S  P S  SA    N QDD+VV W++Y
Sbjct: 69  LPS-HTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLN-QDDEVVPWLNY 126

Query: 47  PIEEILPSE 21
           P+++ L SE
Sbjct: 127 PVDQSLQSE 135


>gb|EOY11782.1| Phytochrome interacting factor 3, putative isoform 3 [Theobroma
           cacao]
          Length = 709

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRK--------SSC 195
           M R   ++++ K  + S+DL  +P+++F ELV ENGQILMQ QS+K R+        S C
Sbjct: 9   MARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPACNSLPSHC 68

Query: 194 VSSGFSPR-------YGTVQEKESR----EKVGSGHPPSRHSANNGANAQDDDVVSWISY 48
           + S  +P+        G    K  +    + V S  P S  SA    N QDD+VV W++Y
Sbjct: 69  LPS-HTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLN-QDDEVVPWLNY 126

Query: 47  PIEEILPSE 21
           P+++ L SE
Sbjct: 127 PVDQSLQSE 135


>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
           cacao]
          Length = 731

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRK--------SSC 195
           M R   ++++ K  + S+DL  +P+++F ELV ENGQILMQ QS+K R+        S C
Sbjct: 9   MARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPACNSLPSHC 68

Query: 194 VSSGFSPR-------YGTVQEKESR----EKVGSGHPPSRHSANNGANAQDDDVVSWISY 48
           + S  +P+        G    K  +    + V S  P S  SA    N QDD+VV W++Y
Sbjct: 69  LPS-HTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLN-QDDEVVPWLNY 126

Query: 47  PIEEILPSE 21
           P+++ L SE
Sbjct: 127 PVDQSLQSE 135


>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
           cacao]
          Length = 729

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRK--------SSC 195
           M R   ++++ K  + S+DL  +P+++F ELV ENGQILMQ QS+K R+        S C
Sbjct: 9   MARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPACNSLPSHC 68

Query: 194 VSSGFSPR-------YGTVQEKESR----EKVGSGHPPSRHSANNGANAQDDDVVSWISY 48
           + S  +P+        G    K  +    + V S  P S  SA    N QDD+VV W++Y
Sbjct: 69  LPS-HTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLN-QDDEVVPWLNY 126

Query: 47  PIEEILPSE 21
           P+++ L SE
Sbjct: 127 PVDQSLQSE 135


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
           gi|567862616|ref|XP_006423962.1| hypothetical protein
           CICLE_v10027890mg [Citrus clementina]
           gi|568853382|ref|XP_006480339.1| PREDICTED:
           transcription factor PIF3-like [Citrus sinensis]
           gi|557525895|gb|ESR37201.1| hypothetical protein
           CICLE_v10027890mg [Citrus clementina]
           gi|557525896|gb|ESR37202.1| hypothetical protein
           CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
 Frame = -2

Query: 350 MMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSS----- 186
           M ++  ++ + K  + S+DL   P+++  ELVWENGQIL Q QS++ +KS   +S     
Sbjct: 9   MTKEKLDSAKQKNPSSSTDLSFEPENDLVELVWENGQILKQGQSSRTKKSPTSNSLPSYC 68

Query: 185 -------------GFSPRYGTVQEKESREKVGSGHPPSRHSANNGANAQDDDVVSWISYP 45
                        G + ++GTV      + + +G   S  S   G N QDDD+V W++Y 
Sbjct: 69  LRSHTPKNRDKDLGKTGKFGTV------DAMLNGIQMSDPSGEMGLN-QDDDMVPWLNYA 121

Query: 44  IEEILPSETLQNDY 3
           ++     E+LQ DY
Sbjct: 122 VD-----ESLQQDY 130


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
           gi|223548548|gb|EEF50039.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 758

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
 Frame = -2

Query: 329 TTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRKSSCVSSGFSPRYGTVQEK 150
           +++ K T  S+DL + P+++F ELVWENGQI    QS++ RK   +S+G   +    ++K
Sbjct: 18  SSQEKNTTCSTDLSAGPENDFLELVWENGQI----QSSRARK---ISNGVQSQTSKFRDK 70

Query: 149 ESREKVGSGH-----------------PPSRHSANNGANAQDDDVVSWISYPIEEILPSE 21
           +    +G+G+                 P S  S   G N Q+DD+V W++ PI+     +
Sbjct: 71  DISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLN-QEDDMVPWLNDPID-----D 124

Query: 20  TLQNDY 3
           +LQ DY
Sbjct: 125 SLQQDY 130


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
           gi|550324617|gb|EEE95373.2| hypothetical protein
           POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
 Frame = -2

Query: 365 ELLPWMMRQGQETTRPKMTNGSSDLFSIPDDEFTELVWENGQILMQNQSNKGRK-SSC-- 195
           ELL  M +   ++++ K    S+DL  +P+++F EL+WENGQI    Q ++ RK  +C  
Sbjct: 5   ELLYRMAKGKTDSSQEKNPACSTDLSFVPENDFGELIWENGQI----QYSRARKIQTCNS 60

Query: 194 ---------VSSGFSPRYGTVQEKESREKVGSGHPPSRHSANNGANAQDDDVVSWISYPI 42
                    + +G + + G     ES        P     AN     QDDD+V W++YP+
Sbjct: 61  LPPKIRDKDIGNGTNTKTGKFGTMESTLNELLAVPAVEVRAN-----QDDDMVPWLNYPL 115

Query: 41  EEILPSETLQNDY 3
           +     E LQ+DY
Sbjct: 116 D-----EPLQHDY 123