BLASTX nr result

ID: Zingiber25_contig00034790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034790
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group] g...    59   1e-06
gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indi...    59   1e-06
ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
dbj|BAK05851.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   5e-06
gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]     56   8e-06

>ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
           gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa
           Japonica Group]
          Length = 553

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -1

Query: 214 RPDVVCYTSVIDILASSGRTEEALAVFEEILTHGISPDAAAFTVLVKLYSCCLGQFD 44
           RPD  C+T+V   L+S+ R   ALAV + +   G++PDAAA TVLV +Y+C L +FD
Sbjct: 99  RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFD 155


>gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -1

Query: 214 RPDVVCYTSVIDILASSGRTEEALAVFEEILTHGISPDAAAFTVLVKLYSCCLGQFD 44
           RPD  C+T+V   L+S+ R   ALAV + +   G++PDAAA TVLV +Y+C L +FD
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFD 235


>ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 550

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/57 (49%), Positives = 37/57 (64%)
 Frame = -1

Query: 214 RPDVVCYTSVIDILASSGRTEEALAVFEEILTHGISPDAAAFTVLVKLYSCCLGQFD 44
           RPD  C+T+V   L+S+ R   ALAV E +   G++PD  A TVLV +Y+C L QFD
Sbjct: 96  RPDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFD 152


>dbj|BAK05851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 495

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/56 (41%), Positives = 39/56 (69%)
 Frame = -1

Query: 220 SCRPDVVCYTSVIDILASSGRTEEALAVFEEILTHGISPDAAAFTVLVKLYSCCLG 53
           +C P V  Y S +  LA +GR  +A+A+F+++L HG++PD  A+++L+ +YS  LG
Sbjct: 36  ACAPTVASYVSAMSALAKAGRAADAMALFDDMLAHGVAPDRRAYSLLLHVYSTHLG 91


>gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]
          Length = 548

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%)
 Frame = -1

Query: 211 PDVVCYTSVIDILASSGRTEEALAVFEEILTHGISPDAAAFTVLVKLYSCCLGQFD 44
           P V+CY ++++ LA +GR EEA   F+E+L  G++P+A++  +LVKL+S    +FD
Sbjct: 94  PSVLCYNTLVNALAEAGRVEEAHNAFDEMLATGVAPNASSLNILVKLHSWRSARFD 149


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