BLASTX nr result

ID: Zingiber25_contig00034768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034768
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...   129   4e-28
emb|CBI15973.3| unnamed protein product [Vitis vinifera]              129   5e-28
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...   127   2e-27
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...   127   2e-27
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]     125   6e-27
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             125   8e-27
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
gb|EMJ08751.1| hypothetical protein PRUPE_ppa017672mg [Prunus pe...   122   5e-26
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...   121   1e-25
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   121   1e-25
ref|XP_006602194.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...   120   2e-25
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...   120   2e-25
ref|XP_004290462.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25

>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/79 (72%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED +E+AL+LHSE+LAIA+GLIS     PIRI KNLRVC DCH VAKL+S +YNR+I+LR
Sbjct: 668 EDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHSVAKLISKLYNREILLR 727

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF+GG CSCMDYW
Sbjct: 728 DRYRFHHFSGGNCSCMDYW 746


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
           gi|557530863|gb|ESR42046.1| hypothetical protein
           CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/79 (72%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED +E+AL+LHSE+LAIA+GLIS     PIRI KNLRVC DCH VAKL+S +YNR+I+LR
Sbjct: 659 EDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHSVAKLISKLYNREILLR 718

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF+GG CSCMDYW
Sbjct: 719 DRYRFHHFSGGNCSCMDYW 737


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  129 bits (323), Expect = 5e-28
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED KE+AL LHSEKLAIAFGLIST    PIRI KNLRVC DCH VAKLVS +Y+R+I+LR
Sbjct: 574 EDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLR 633

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSCMDYW
Sbjct: 634 DRYRFHHFREGHCSCMDYW 652


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  129 bits (323), Expect = 5e-28
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED KE+AL LHSEKLAIAFGLIST    PIRI KNLRVC DCH VAKLVS +Y+R+I+LR
Sbjct: 665 EDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLR 724

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSCMDYW
Sbjct: 725 DRYRFHHFREGHCSCMDYW 743


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score =  127 bits (318), Expect = 2e-27
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           +D +E AL LHSEKLAIAFGL+   +P PIRI KNLRVC DCH VAKLVS +YNR+IILR
Sbjct: 655 DDLQEHALKLHSEKLAIAFGLLYMEAPQPIRIIKNLRVCGDCHSVAKLVSRLYNREIILR 714

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF GG CSC DYW
Sbjct: 715 DRYRFHHFGGGHCSCKDYW 733


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score =  127 bits (318), Expect = 2e-27
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E  KE AL+LHSEKLAIA+GLI      PIRI KNLRVC DCH VAKL+S +YNRDI+LR
Sbjct: 660 EYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLR 719

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF+GG CSCMDYW
Sbjct: 720 DRYRFHHFSGGNCSCMDYW 738


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  125 bits (315), Expect = 4e-27
 Identities = 55/79 (69%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           +D KE+ALSLHSEKLAIAFGL++ +   PIR+ KNLR+C DCH  AKLVS +Y+RDI+LR
Sbjct: 655 DDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLR 714

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSCMDYW
Sbjct: 715 DRYRFHHFRDGHCSCMDYW 733


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score =  125 bits (314), Expect = 6e-27
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED KE+AL+LHSEKLAIAFGLIST+   PIR+ KNLRVC DCH VAKLVS +Y R+I+LR
Sbjct: 661 EDMKEQALNLHSEKLAIAFGLISTAPSQPIRVVKNLRVCGDCHAVAKLVSKVYKREILLR 720

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC +YW
Sbjct: 721 DRYRFHHFKDGHCSCGEYW 739


>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 695

 Score =  125 bits (313), Expect = 8e-27
 Identities = 54/79 (68%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ++  E++L++HSEKLAIAFGLIST+S  PIRI KN+R+C DCH  AKLVS +Y+RDI+LR
Sbjct: 617 DNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLR 676

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF GG CSC+DYW
Sbjct: 677 DRYRFHHFRGGKCSCLDYW 695


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  125 bits (313), Expect = 8e-27
 Identities = 56/79 (70%), Positives = 64/79 (81%)
 Frame = +1

Query: 1    EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
            E+ KE+AL LHSEK+AIAFGLI   S   IRI KNLRVC DCH VAK+VS +Y RDI+LR
Sbjct: 772  EEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLR 831

Query: 181  DRFRFHHFTGGLCSCMDYW 237
            DR+RFHHF+GG CSC DYW
Sbjct: 832  DRYRFHHFSGGHCSCQDYW 850


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 780

 Score =  125 bits (313), Expect = 8e-27
 Identities = 54/79 (68%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ++  E++L++HSEKLAIAFGLIST+S  PIRI KN+R+C DCH  AKLVS +Y+RDI+LR
Sbjct: 702 DNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLR 761

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF GG CSC+DYW
Sbjct: 762 DRYRFHHFRGGKCSCLDYW 780


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score =  124 bits (310), Expect = 2e-26
 Identities = 56/79 (70%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED +E+AL+LHSEKLA+AFGLIS +   PIR+ KNLRVC DCH VAKL+S +YNR+IILR
Sbjct: 666 EDMQEQALNLHSEKLAMAFGLISVAPSQPIRVVKNLRVCADCHAVAKLLSKLYNREIILR 725

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC DYW
Sbjct: 726 DRYRFHHFKEGNCSCKDYW 744


>gb|EMJ08751.1| hypothetical protein PRUPE_ppa017672mg [Prunus persica]
          Length = 745

 Score =  122 bits (306), Expect = 5e-26
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE AL  HSEKLAIAFGLI TS P PIRI KNLR+C+DCH+ AK +S  +NRDI+LR
Sbjct: 667 EEEKETALFRHSEKLAIAFGLICTSPPTPIRIIKNLRICNDCHMAAKFISKAFNRDIVLR 726

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR RFHHF  G CSC DYW
Sbjct: 727 DRHRFHHFKQGSCSCKDYW 745


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/79 (70%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED +E+AL+LHSEKLA+AFGLIS +   PIRI KNLRVC DCH VAKL+S +Y+R+IILR
Sbjct: 666 EDMQEQALNLHSEKLAMAFGLISVAPSQPIRIVKNLRVCADCHAVAKLLSKLYDREIILR 725

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC DYW
Sbjct: 726 DRYRFHHFKEGNCSCKDYW 744


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score =  121 bits (303), Expect = 1e-25
 Identities = 55/79 (69%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           ED K+ AL LHSEKLAIAFGLIS S   PI++ KNLRVC DCH VAKL+S +Y+R+I+LR
Sbjct: 660 EDMKDHALILHSEKLAIAFGLISLSPSQPIQVVKNLRVCGDCHSVAKLISKLYDREILLR 719

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC DYW
Sbjct: 720 DRYRFHHFRDGHCSCNDYW 738


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  121 bits (303), Expect = 1e-25
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE++L+LHSEKLAI +GLIST +P  IR+ KNLR+C DCH VAKL+S +YNR+II+R
Sbjct: 662 EEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVR 721

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC D+W
Sbjct: 722 DRYRFHHFRNGQCSCNDFW 740


>ref|XP_006602194.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform X1 [Glycine max]
          Length = 775

 Score =  120 bits (302), Expect = 1e-25
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE AL  HSEKLA+AFGLI+ S P PIR+TKNLR+C+DCH V KL+S  ++RDI++R
Sbjct: 697 EEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVR 756

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR RFHHF  G CSCMD+W
Sbjct: 757 DRHRFHHFKHGACSCMDFW 775


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
           gi|557111205|gb|ESQ51489.1| hypothetical protein
           EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score =  120 bits (301), Expect = 2e-25
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE++L+LHSEKLAI +GLIST +P  IR+ KNLRVC DCH VAKL+S +Y+R+II+R
Sbjct: 661 EETKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQVYDREIIVR 720

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC D+W
Sbjct: 721 DRYRFHHFRNGQCSCNDFW 739


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score =  120 bits (300), Expect = 2e-25
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE++L+LHSEKLAI +GLIST +P  IR+ KNLRVC DCH VAKL+S +Y+R+II+R
Sbjct: 661 EEMKEQSLNLHSEKLAICYGLISTEAPKTIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 720

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR+RFHHF  G CSC D+W
Sbjct: 721 DRYRFHHFRNGQCSCNDFW 739


>ref|XP_004290462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Fragaria vesca subsp. vesca]
          Length = 576

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = +1

Query: 1   EDAKERALSLHSEKLAIAFGLISTSSPAPIRITKNLRVCDDCHLVAKLVSGIYNRDIILR 180
           E+ KE AL  H EKLA+AFGLISTS   PI++ KNLR+CDDCH+V KLVS +YNR+II+R
Sbjct: 498 EEEKENALGYHCEKLAVAFGLISTSEGTPIQVIKNLRICDDCHVVMKLVSKVYNREIIVR 557

Query: 181 DRFRFHHFTGGLCSCMDYW 237
           DR RFH F  G CSC DYW
Sbjct: 558 DRARFHRFQDGFCSCRDYW 576


Top