BLASTX nr result
ID: Zingiber25_contig00034372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00034372
(627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001062533.1| Os08g0564800 [Oryza sativa Japonica Group] g... 83 7e-14
ref|XP_003573223.1| PREDICTED: uncharacterized protein LOC100840... 83 7e-14
gb|EEC84047.1| hypothetical protein OsI_30310 [Oryza sativa Indi... 83 7e-14
gb|AFP44686.1| hypothetical protein [Eragrostis tef] 79 8e-13
gb|EMT27567.1| hypothetical protein F775_31479 [Aegilops tauschii] 75 1e-11
gb|EMS60107.1| hypothetical protein TRIUR3_20337 [Triticum urartu] 75 2e-11
gb|EMS54676.1| hypothetical protein TRIUR3_34362 [Triticum urartu] 73 8e-11
gb|EMT27063.1| hypothetical protein F775_02097 [Aegilops tauschii] 71 2e-10
ref|XP_006660397.1| PREDICTED: mediator of RNA polymerase II tra... 70 4e-10
tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea m... 69 1e-09
gb|EMT20209.1| hypothetical protein F775_21967 [Aegilops tauschii] 64 3e-08
gb|AFW61659.1| hypothetical protein ZEAMMB73_514492 [Zea mays] 64 4e-08
gb|AFW61658.1| hypothetical protein ZEAMMB73_514492 [Zea mays] 64 4e-08
gb|AFW61657.1| hypothetical protein ZEAMMB73_514492 [Zea mays] 64 4e-08
gb|EMS63358.1| hypothetical protein TRIUR3_06562 [Triticum urartu] 62 1e-07
gb|EMT30586.1| hypothetical protein F775_07379 [Aegilops tauschii] 58 3e-06
ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II tra... 57 4e-06
ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II tra... 57 4e-06
ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II tra... 57 4e-06
ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II tra... 57 4e-06
>ref|NP_001062533.1| Os08g0564800 [Oryza sativa Japonica Group]
gi|42409072|dbj|BAD10323.1| putative CTV.22 [Oryza
sativa Japonica Group] gi|45735914|dbj|BAD12946.1|
putative CTV.22 [Oryza sativa Japonica Group]
gi|113624502|dbj|BAF24447.1| Os08g0564800 [Oryza sativa
Japonica Group] gi|215700965|dbj|BAG92389.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222641028|gb|EEE69160.1| hypothetical protein
OsJ_28313 [Oryza sativa Japonica Group]
Length = 1320
Score = 82.8 bits (203), Expect = 7e-14
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ DM Q QRLP Q NNLL+MQQ++ +LNQQSMP HQQQ LG+Q NIS
Sbjct: 356 LIGQQNGAVDMPQQQRLPVQSNNLLNMQQTQQMLNQQSMPSHQQQQLGSQANISTLQQQQ 415
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NV N+Q
Sbjct: 416 QQNQQQQQLLGTVPNVPNIQ 435
>ref|XP_003573223.1| PREDICTED: uncharacterized protein LOC100840942 [Brachypodium
distachyon]
Length = 1296
Score = 82.8 bits (203), Expect = 7e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ+ +MQQ QRLP Q NNLL+MQQ++ +LNQQSMPLHQ Q L +Q N+S
Sbjct: 346 LIGQQSGAVEMQQQQRLPVQSNNLLNMQQTQQMLNQQSMPLHQPQQLASQANMSNLQQQQ 405
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NVSN+Q
Sbjct: 406 QQNQQQQQLLGTVPNVSNVQ 425
>gb|EEC84047.1| hypothetical protein OsI_30310 [Oryza sativa Indica Group]
Length = 1217
Score = 82.8 bits (203), Expect = 7e-14
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ DM Q QRLP Q NNLL+MQQ++ +LNQQSMP HQQQ LG+Q NIS
Sbjct: 253 LIGQQNGAVDMPQQQRLPVQSNNLLNMQQTQQMLNQQSMPSHQQQQLGSQANISTLQQQQ 312
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NV N+Q
Sbjct: 313 QQNQQQQQLLGTVPNVPNIQ 332
>gb|AFP44686.1| hypothetical protein [Eragrostis tef]
Length = 1269
Score = 79.3 bits (194), Expect = 8e-13
Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGF-SLX 290
L+GQQ + +MQQ QRLP Q NNLL+MQQ++ +LNQQSMP+HQ Q +G+Q N+S
Sbjct: 316 LIGQQNNAVEMQQQQRLPVQSNNLLNMQQTQQMLNQQSMPMHQPQQMGSQANMSSLQQQQ 375
Query: 289 XXXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NVSN+Q
Sbjct: 376 QQQQNQQQQLLGTVPNVSNIQ 396
>gb|EMT27567.1| hypothetical protein F775_31479 [Aegilops tauschii]
Length = 1277
Score = 75.5 bits (184), Expect = 1e-11
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ +MQQ QRLP Q NNLL++QQ++ +LNQ SMPLHQ Q LG+Q+N+S
Sbjct: 319 LIGQQNGTMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSS-PQQQ 377
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NVSN+Q
Sbjct: 378 QQNQQLQQLLGTVPNVSNMQ 397
>gb|EMS60107.1| hypothetical protein TRIUR3_20337 [Triticum urartu]
Length = 1245
Score = 75.1 bits (183), Expect = 2e-11
Identities = 39/80 (48%), Positives = 53/80 (66%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ +MQQ QRLP Q NNLL++QQ++ +LNQ S PLHQ Q LG+Q+N+S
Sbjct: 280 LIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQ-QQ 338
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+L ++ NVSN+Q
Sbjct: 339 QQNQQPQQLLGTVPNVSNMQ 358
>gb|EMS54676.1| hypothetical protein TRIUR3_34362 [Triticum urartu]
Length = 1129
Score = 72.8 bits (177), Expect = 8e-11
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQS-KHLLNQQSMPLHQQQMLGTQTNIS 305
L+GQQ +MQQ QRLP Q NNLL+MQQ+ + +LNQQSMPLHQ Q LG+Q N+S
Sbjct: 186 LIGQQNGAVEMQQQQRLPAQSNNLLNMQQTQQQMLNQQSMPLHQPQQLGSQANMS 240
>gb|EMT27063.1| hypothetical protein F775_02097 [Aegilops tauschii]
Length = 1475
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQS-KHLLNQQSMPLHQQQMLGTQTNIS 305
L+GQQ +MQQ QRLP Q NNLL++QQ+ + +LNQQSMPLHQ Q LG+Q N+S
Sbjct: 532 LIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQANMS 586
>ref|XP_006660397.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like, partial [Oryza brachyantha]
Length = 1297
Score = 70.5 bits (171), Expect = 4e-10
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
L+GQQ DM Q QRLP Q +NLL+MQQ+ +LNQQSMP HQQQ LG+Q NIS
Sbjct: 335 LIGQQNGSVDMPQQQRLPVQ-SNLLNMQQTPQMLNQQSMPSHQQQQLGSQANIS 387
>tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea mays]
Length = 540
Score = 68.6 bits (166), Expect = 1e-09
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFS 296
LV QQ+ +MQQ QRLP Q NLL+M Q++ ++NQQSMPLHQ Q L Q N+S +
Sbjct: 349 LVNQQSGAVEMQQQQRLPVQSTNLLNMHQTQQMMNQQSMPLHQPQQLANQGNVSSLN 405
>gb|EMT20209.1| hypothetical protein F775_21967 [Aegilops tauschii]
Length = 561
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXX 287
L+GQQ MQQ QRL Q NNLL++QQ+ +LNQQ +PL+Q Q LG+Q N+S
Sbjct: 209 LIGQQNGAVMMQQQQRLAVQSNNLLNVQQTHQMLNQQYIPLYQPQQLGSQANMSSLQ-QH 267
Query: 286 XXXXXXXQMLESLSNVSNLQ 227
Q+ ++ NVS++Q
Sbjct: 268 QQNQQQQQLFGTVPNVSSMQ 287
>gb|AFW61659.1| hypothetical protein ZEAMMB73_514492 [Zea mays]
Length = 1308
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
L+ QQ+ + QQ QRLP Q NNLL+MQQ++ ++NQQSM LHQ Q L Q N+S
Sbjct: 365 LMNQQSGVVETQQQQRLPVQSNNLLNMQQTQQMMNQQSMSLHQPQQLANQGNMS 418
>gb|AFW61658.1| hypothetical protein ZEAMMB73_514492 [Zea mays]
Length = 1305
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
L+ QQ+ + QQ QRLP Q NNLL+MQQ++ ++NQQSM LHQ Q L Q N+S
Sbjct: 363 LMNQQSGVVETQQQQRLPVQSNNLLNMQQTQQMMNQQSMSLHQPQQLANQGNMS 416
>gb|AFW61657.1| hypothetical protein ZEAMMB73_514492 [Zea mays]
Length = 1306
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
L+ QQ+ + QQ QRLP Q NNLL+MQQ++ ++NQQSM LHQ Q L Q N+S
Sbjct: 363 LMNQQSGVVETQQQQRLPVQSNNLLNMQQTQQMMNQQSMSLHQPQQLANQGNMS 416
>gb|EMS63358.1| hypothetical protein TRIUR3_06562 [Triticum urartu]
Length = 447
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = -3
Query: 457 QQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNISGFSLXXXXX 278
QQ +MQ+ QRLP Q NNLL++QQ++ +LNQQ MPLHQ LG+Q +
Sbjct: 164 QQNGAVEMQEQQRLPVQSNNLLNVQQTQQMLNQQYMPLHQPHQLGSQAYMVSLQ------ 217
Query: 277 XXXXQMLESLSNVSNL 230
Q+L ++ NVSN+
Sbjct: 218 --HQQLLGTVPNVSNM 231
>gb|EMT30586.1| hypothetical protein F775_07379 [Aegilops tauschii]
Length = 429
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -3
Query: 466 LVGQQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
L+GQ +MQ+ QRLP Q N LL++QQ++ +LNQ M LHQ LG+Q N++
Sbjct: 228 LIGQHNGAVEMQEQQRLPVQSNILLNVQQTQQMLNQPYMLLHQTHQLGSQANMA 281
>ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X4 [Setaria italica]
Length = 1328
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 457 QQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
QQ Q LP Q NNLL+MQQ++ +LNQQSMPLHQ Q L Q N+S
Sbjct: 367 QQNQLMSQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQSQQLAPQGNMS 417
>ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Setaria italica]
Length = 1329
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 457 QQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
QQ Q LP Q NNLL+MQQ++ +LNQQSMPLHQ Q L Q N+S
Sbjct: 367 QQNQLMSQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQSQQLAPQGNMS 417
>ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Setaria italica]
Length = 1361
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 457 QQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
QQ Q LP Q NNLL+MQQ++ +LNQQSMPLHQ Q L Q N+S
Sbjct: 367 QQNQLMSQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQSQQLAPQGNMS 417
>ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Setaria italica]
Length = 1362
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 457 QQTSGTDMQQPQRLPTQQNNLLSMQQSKHLLNQQSMPLHQQQMLGTQTNIS 305
QQ Q LP Q NNLL+MQQ++ +LNQQSMPLHQ Q L Q N+S
Sbjct: 367 QQNQLMSQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQSQQLAPQGNMS 417