BLASTX nr result

ID: Zingiber25_contig00034208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034208
         (267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT19900.1| Squamosa promoter-binding-like protein 17 [Aegilo...    58   1e-06
dbj|BAJ94319.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   2e-06
ref|XP_004974838.1| PREDICTED: squamosa promoter-binding-like pr...    56   4e-06
gb|AGI62050.1| SQUAMOSA promoter-binding-like 2 [Erycina pusilla]      56   6e-06

>gb|EMT19900.1| Squamosa promoter-binding-like protein 17 [Aegilops tauschii]
          Length = 385

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/99 (44%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
 Frame = +1

Query: 1   EPGRFRSFLMDFSYPK---NGRDICSG-----NLVTSNQWHQVVD-APSTGIAPMLEAHP 153
           EPGRFRS+L+DFSYP+   + RD   G      +    QW   +D  P TG A     H 
Sbjct: 169 EPGRFRSYLLDFSYPRVPSSVRDAWPGARPGYRMPGEIQWQGNLDLRPHTGAATGYHGHH 228

Query: 154 YLQGSPGHQILLSSPELQPAGDCLAG-ALDGSCALSLLS 267
                 G       PEL P+G CLAG A D SCALSLLS
Sbjct: 229 AYSSHGGG---FPGPELPPSG-CLAGVAADSSCALSLLS 263


>dbj|BAJ94319.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/99 (43%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
 Frame = +1

Query: 1   EPGRFRSFLMDFSYPK---NGRDICSG-----NLVTSNQWHQVVD-APSTGIAPMLEAHP 153
           EPGRFRS+L+DFSYP+   + RD   G      +    QW   +D  P TG A       
Sbjct: 170 EPGRFRSYLLDFSYPRVPSSVRDAWPGARPGYRMPGEIQWQGNLDLRPHTGAATGYHGPQ 229

Query: 154 YLQGSPGHQILLSSPELQPAGDCLAG-ALDGSCALSLLS 267
                 GH      PE+ P G CLAG A D SCALSLLS
Sbjct: 230 PHHAYSGHGGGFPGPEIPPGG-CLAGVAADSSCALSLLS 267


>ref|XP_004974838.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Setaria
           italica]
          Length = 401

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/102 (41%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
 Frame = +1

Query: 1   EPGRFRSFLMDFSYPKNGRDICSG--------NLVTSNQWHQVVDAPSTGIAPMLEAHPY 156
           EPGRFRSFL+DF+YP+    +  G         +  S QW   +D           AH Y
Sbjct: 185 EPGRFRSFLLDFTYPRVPSSMRDGWPAARPGERVPASIQWQASLDPHQHSAITGYGAHSY 244

Query: 157 LQGSPGHQI----LLSSPELQPAGDCLAGA-LDGSCALSLLS 267
             GS G       +   PEL P G CLAG   D SCALSLLS
Sbjct: 245 --GSHGSSSSGPPVFPGPELPPGG-CLAGVPADSSCALSLLS 283


>gb|AGI62050.1| SQUAMOSA promoter-binding-like 2 [Erycina pusilla]
          Length = 348

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
 Frame = +1

Query: 10  RFRSFLMDFSYPKN---GRDIC----SGNLVTSNQWHQVVDAPSTGIAPMLEAHPYLQGS 168
           R+RSFLMDF+YPK     +DI     + +    NQWH+  D                 G 
Sbjct: 158 RYRSFLMDFTYPKPPGASKDIWPVMRNNDQAVHNQWHESFDNRGE------------LGG 205

Query: 169 PGHQIL--LSSPELQPAGDCLAGALDGSCALSLLS 267
             HQ L  LS+PE Q +GD LAG  D SCALSLLS
Sbjct: 206 NNHQYLSFLSAPE-QASGDFLAGVSDSSCALSLLS 239


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