BLASTX nr result
ID: Zingiber25_contig00034162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00034162
(934 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 195 2e-47
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447... 194 5e-47
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr... 193 7e-47
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A... 193 9e-47
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is... 193 9e-47
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 191 3e-46
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l... 189 2e-45
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 187 4e-45
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 187 5e-45
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 187 6e-45
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 187 6e-45
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 186 1e-44
gb|ABK22805.1| unknown [Picea sitchensis] 186 1e-44
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 186 1e-44
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 185 2e-44
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 185 2e-44
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote... 184 3e-44
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 184 3e-44
gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica] 184 3e-44
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 184 4e-44
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 195 bits (496), Expect = 2e-47
Identities = 101/128 (78%), Positives = 105/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLY+IRGENVVLIGELD EKEELP HM VS EIRRAQ+AERDATDLKG+MRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 194 bits (492), Expect = 5e-47
Identities = 100/128 (78%), Positives = 106/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGP+DIFLSTSLA+Y GILRSFDQFANVVLEGACERVIVGDL
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDI LGLYVIRGENVVLIGELD EKEELP+HM CVS EI+RAQ+AER+ATDLKGSMRK
Sbjct: 61 YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
gi|557556056|gb|ESR66070.1| hypothetical protein
CICLE_v10009897mg [Citrus clementina]
Length = 128
Score = 193 bits (491), Expect = 7e-47
Identities = 97/128 (75%), Positives = 105/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGP+D+FLSTSLA+Y G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1 MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD EKEELP HM CVS EI+RAQ+AE+DAT LKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
gi|548839141|gb|ERM99455.1| hypothetical protein
AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 193 bits (490), Expect = 9e-47
Identities = 100/128 (78%), Positives = 104/128 (81%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDIFLSTSLASY GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCD+PLGLYVIRGENVVLIGELD E+EELP HM VS EI+RAQ+AERDA DLKGSMRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDPEREELPAHMTRVSAVEIKRAQKAERDAKDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 193 bits (490), Expect = 9e-47
Identities = 99/128 (77%), Positives = 106/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGP+DIFLSTSLA+Y G+LRSFDQFANVVLEGACERVIVGDL
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD EKEELP+HM VS EI+RAQ+AER+ATDLKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTPVSAAEIKRAQKAEREATDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 191 bits (486), Expect = 3e-46
Identities = 99/128 (77%), Positives = 105/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY GILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD EKEELP HM VS EI+RAQ+AER+A+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Citrus sinensis]
Length = 128
Score = 189 bits (479), Expect = 2e-45
Identities = 96/128 (75%), Positives = 104/128 (81%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGP+D+FLSTSLA+Y G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1 MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD EKEELP HM VS EI+RAQ+AE+DAT LKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTRVSTAEIKRAQKAEKDATVLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 187 bits (476), Expect = 4e-45
Identities = 95/128 (74%), Positives = 105/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPED++LSTSLASY GILRSFDQFAN VLEGACERVIVG+L
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELDSE+EELP HM VS EI+ AQ+AER+A+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 187 bits (475), Expect = 5e-45
Identities = 94/128 (73%), Positives = 106/128 (82%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPED++LSTSLASY GILRSFDQFAN VLEGACERVIVG+L
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCD+PLGLYVIRGENVVLIGELD+E+EELP HM VS EI+RAQ+AER+A+DLKG+MRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 187 bits (474), Expect = 6e-45
Identities = 96/128 (75%), Positives = 103/128 (80%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY G LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD E+EELP HM VS EI+RAQ+AER+A+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 187 bits (474), Expect = 6e-45
Identities = 97/128 (75%), Positives = 104/128 (81%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLA+Y G+LRSFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDI LGLYVIRGENVVLIGELD E+EELP HM VS EIRRAQ+AER+ATDLKG+MRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 186 bits (472), Expect = 1e-44
Identities = 97/128 (75%), Positives = 103/128 (80%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY GILRSFDQFAN VLEGACER IVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDI LGLYVIRGENVVLIGELD E+EELP HM VS EI+RAQ+AER+ATDLKG+MRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 186 bits (472), Expect = 1e-44
Identities = 96/128 (75%), Positives = 104/128 (81%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDIFLSTSLASY GILRSFDQFAN VLE A ER+IVGDL
Sbjct: 45 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDL 104
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCD+PLGLYVIRGENVVLIGELD E+EELP +M+ VS EI+RAQ+AERDATDLKGSMRK
Sbjct: 105 YCDLPLGLYVIRGENVVLIGELDPEREELPANMIHVSATEIKRAQKAERDATDLKGSMRK 164
Query: 230 RMEFLDLD 207
RMEFLDL+
Sbjct: 165 RMEFLDLE 172
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 186 bits (471), Expect = 1e-44
Identities = 95/128 (74%), Positives = 102/128 (79%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY G LRSFDQFAN VLEGACERV+VGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD E+EELP HM V EI RAQ+AERDA+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 185 bits (470), Expect = 2e-44
Identities = 95/128 (74%), Positives = 103/128 (80%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPEDI+LSTSLASY G LRSFDQFAN VLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD E+EELP HM VS EI+RAQ+AER+A+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 185 bits (469), Expect = 2e-44
Identities = 95/128 (74%), Positives = 102/128 (79%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
M + GPEDI+LSTSLASY G LRSFDQFAN VLEGAC+RVIVGDL
Sbjct: 1 MPYLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD E+EELP HM CVS EIRRAQ+AER+A DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128
>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 184 bits (468), Expect = 3e-44
Identities = 96/128 (75%), Positives = 101/128 (78%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGPED LSTSLASY G+LRSFDQFANVVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGEL+ KEELP HM V EI+RAQ+AERDA+DLKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 184 bits (468), Expect = 3e-44
Identities = 95/128 (74%), Positives = 101/128 (78%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWA PEDI+ STSLASY GILRSFDQFAN VLE ACER IVGDL
Sbjct: 1 MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLY+IRGENVVLIGELD +KEELP HM VS EIRRAQ+AERD+TDLKGSMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD+D
Sbjct: 121 RMEFLDMD 128
>gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 184 bits (468), Expect = 3e-44
Identities = 96/128 (75%), Positives = 102/128 (79%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWA PEDI LSTSLA+Y G+LRSFDQFANVVLEGACER+IVGDL
Sbjct: 1 MSWASPEDISLSTSLATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD EKEELP HM VS EI+RAQ+AE+DAT LKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTHVSTEEIKRAQKAEKDATVLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 184 bits (467), Expect = 4e-44
Identities = 94/128 (73%), Positives = 104/128 (81%)
Frame = -3
Query: 590 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLEGACERVIVGDL 411
MSWAGP+D++LSTSLASY G L SFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
Query: 410 YCDIPLGLYVIRGENVVLIGELDSEKEELPTHMVCVSVPEIRRAQRAERDATDLKGSMRK 231
YCDIPLGLYVIRGENVVLIGELD E++ELP H+ VSV EI+RAQ+AER+A+DLKGSMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRAQKAEREASDLKGSMRK 120
Query: 230 RMEFLDLD 207
RMEFLDLD
Sbjct: 121 RMEFLDLD 128