BLASTX nr result

ID: Zingiber25_contig00034155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034155
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580688.1| PREDICTED: uncharacterized protein LOC100833...    60   2e-07
gb|EMT01987.1| hypothetical protein F775_33299 [Aegilops tauschii]     58   1e-06

>ref|XP_003580688.1| PREDICTED: uncharacterized protein LOC100833033 [Brachypodium
           distachyon]
          Length = 316

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -3

Query: 372 HDYDREVERVSSGEFLCPENLV--GGTPRLGHFVIRAGTPTDGFCHNNKTSRMSWQPPAA 199
           HD++ EVE+V S EFLC EN V   GTP LGHF+IRAG P D FC        S Q  AA
Sbjct: 255 HDFNFEVEQVLSKEFLCDENRVQGSGTPSLGHFLIRAGGPKDSFC--------SGQDSAA 306

Query: 198 GTTAG 184
             ++G
Sbjct: 307 AASSG 311


>gb|EMT01987.1| hypothetical protein F775_33299 [Aegilops tauschii]
          Length = 88

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = -3

Query: 372 HDYDREVERVSSGEFLCPENLVGG--TPRLGHFVIRAGTPTDGFCHNNKTSR 223
           HD++ EVE+V S EFLC EN V G  TP L H+VIR G P D FC   + SR
Sbjct: 27  HDFNFEVEQVLSKEFLCDENRVAGSGTPSLAHYVIRPGGPADAFCAAGQDSR 78


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