BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034072
         (329 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein...    91   2e-16
gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis]      90   4e-16
ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citr...    90   4e-16
ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    86   4e-15
ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    77   3e-12
ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [A...    74   3e-11
ref|XP_004964184.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [S...    68   1e-09
ref|NP_001141436.1| hypothetical protein [Zea mays] gi|194704572...    67   3e-09
gb|EMT26142.1| hypothetical protein F775_09158 [Aegilops tauschii]     66   4e-09
ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group] g...    65   1e-08
gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japo...    65   1e-08
gb|EEC69117.1| hypothetical protein OsI_38034 [Oryza sativa Indi...    65   1e-08
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08

>gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 747

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/74 (59%), Positives = 57/74 (77%)
 Frame = -3

Query: 222 MNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNG 43
           M   L ++G +A  +F QN  +TQLA+SG+IEEAI +F GM  RNTVTYNSMISA++KNG
Sbjct: 1   MKQNLKIMGEQANHLFNQNTNITQLAKSGKIEEAIQIFSGMTHRNTVTYNSMISAFSKNG 60

Query: 42  YVVDARILFDQMPR 1
            + DAR LFD+MP+
Sbjct: 61  KIDDARQLFDKMPK 74


>gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis]
          Length = 745

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 44/71 (61%), Positives = 56/71 (78%)
 Frame = -3

Query: 213 QLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVV 34
           ++  +G     VF+QNLK+TQL +SGRI+EAI +F  M  +NTVT+NSMISAYAKNG +V
Sbjct: 2   KMRSVGDMGNHVFSQNLKITQLGKSGRIDEAIKVFSQMTQKNTVTFNSMISAYAKNGRIV 61

Query: 33  DARILFDQMPR 1
           DAR LFD+MPR
Sbjct: 62  DARQLFDKMPR 72


>ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citrus clementina]
           gi|568855508|ref|XP_006481346.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Citrus sinensis]
           gi|557531811|gb|ESR42994.1| hypothetical protein
           CICLE_v10011150mg [Citrus clementina]
          Length = 740

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/74 (60%), Positives = 55/74 (74%)
 Frame = -3

Query: 222 MNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNG 43
           M + L  +G +   VF QN K+TQL +SGR+EEAI +F  M  +NTVTYNSMISAYAKNG
Sbjct: 1   MKASLKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKMFSQMSQKNTVTYNSMISAYAKNG 60

Query: 42  YVVDARILFDQMPR 1
            V DAR LF+QMP+
Sbjct: 61  RVNDARKLFEQMPQ 74


>ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 222 MNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNG 43
           M   +  +G +   VF QNL+++QL RSGRIEEA+A+F  M  RN VTYNSMISAYAKNG
Sbjct: 1   MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNG 60

Query: 42  YVVDARILFDQMPR 1
            + +AR LFD MP+
Sbjct: 61  RIANARELFDLMPQ 74


>ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 222 MNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNG 43
           M   +  +G +   VF QNL+++QL RSGRIEEA+A+F  M  RN VTYNSMISAYAKNG
Sbjct: 1   MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNG 60

Query: 42  YVVDARILFDQMPR 1
            + +AR LFD MP+
Sbjct: 61  RIANARELFDLMPQ 74


>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/70 (62%), Positives = 53/70 (75%)
 Frame = -3

Query: 213 QLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVV 34
           +L  +G +   VF QNLK+TQL + GRI+EAI +F  M  RNTVTYNSMISAYAKNG V 
Sbjct: 2   KLRSIGEKGTQVFHQNLKITQLGKLGRIDEAIKVFSQMTQRNTVTYNSMISAYAKNGRVG 61

Query: 33  DARILFDQMP 4
           +AR LFD+MP
Sbjct: 62  NARQLFDEMP 71


>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 222 MNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNG 43
           M S L  +G     VF  NLK+TQL +SG+I+EAI +F  M  +NTVT+NSMISA+AKNG
Sbjct: 1   MKSSLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNG 60

Query: 42  YVVDARILFDQMPR 1
            + DAR LFD MP+
Sbjct: 61  RISDARQLFDGMPQ 74


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/62 (58%), Positives = 49/62 (79%)
 Frame = -3

Query: 192  RAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFD 13
            R   +  QNLK+TQL + G+I+EAI +F+G+   NTVTYNSMISAYAKNG +++AR LF+
Sbjct: 1934 RGRTIIQQNLKITQLGKRGQIDEAIRVFNGITHPNTVTYNSMISAYAKNGRIINARKLFE 1993

Query: 12   QM 7
            +M
Sbjct: 1994 KM 1995


>ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Solanum tuberosum]
           gi|565393459|ref|XP_006362393.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like isoform X2 [Solanum tuberosum]
           gi|565393461|ref|XP_006362394.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like isoform X3 [Solanum tuberosum]
           gi|565393463|ref|XP_006362395.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like isoform X4 [Solanum tuberosum]
           gi|565393465|ref|XP_006362396.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like isoform X5 [Solanum tuberosum]
          Length = 742

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -3

Query: 192 RAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFD 13
           R   +  QNLK+TQL + G+I+EAI +F+ +   NTVTYNSMISAYAKNG ++ AR LFD
Sbjct: 6   RGRTIIQQNLKITQLGKRGQIDEAIRVFNRITHPNTVTYNSMISAYAKNGRIIHARKLFD 65

Query: 12  QM 7
           +M
Sbjct: 66  KM 67


>ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [Amborella trichopoda]
           gi|548839216|gb|ERM99509.1| hypothetical protein
           AMTR_s00088p00046280 [Amborella trichopoda]
          Length = 602

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -3

Query: 225 MMNSQLNVLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKN 46
           M   QL V       +F+QNLK+T   ++GR+ +A+ALF  M  +NTVT+N+MISAY+K+
Sbjct: 1   MAAHQLRVAAGGGSFLFSQNLKITNYTKAGRLRDAVALFEKMTHKNTVTWNAMISAYSKS 60

Query: 45  GYVVDARILFDQMP 4
           G + DAR LF +MP
Sbjct: 61  GKLSDARSLFVRMP 74


>ref|XP_004964184.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Setaria italica]
          Length = 701

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT+LARSG++  A  LF  M  RNTVTYN+M+SA A NG + +AR LFD 
Sbjct: 15  ATAVFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNAMLSALAHNGRIDEARALFDG 74

Query: 9   MPR 1
           MPR
Sbjct: 75  MPR 77



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 168 NLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQMP 4
           N  L+ LA +GRI+EA ALF GM  RN V++N+MI+A++ +G V DAR LFD+MP
Sbjct: 53  NAMLSALAHNGRIDEARALFDGMPRRNAVSWNAMIAAFSDHGRVADARSLFDEMP 107


>ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = -3

Query: 198 GCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARIL 19
           G     V+  N +LT+LARSG++  A  LF  M +RNTV+YN+M+SA A++G + DAR L
Sbjct: 5   GAATTAVYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRL 64

Query: 18  FDQMPR 1
           FD++PR
Sbjct: 65  FDEIPR 70


>ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
           gi|241943194|gb|EES16339.1| hypothetical protein
           SORBIDRAFT_08g020970 [Sorghum bicolor]
          Length = 701

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT+LARSG++  A  LF  M  RNTVTYNSM+SA A++G + +AR LFD 
Sbjct: 15  ASAVFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDG 74

Query: 9   MP 4
           MP
Sbjct: 75  MP 76



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -3

Query: 168 NLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQMP 4
           N  L+ LAR GRI+EA ALF GM +RN V++N+MI+A + +G V DAR LFD+MP
Sbjct: 53  NSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMP 107


>ref|NP_001141436.1| hypothetical protein [Zea mays] gi|194704572|gb|ACF86370.1| unknown
           [Zea mays] gi|414877969|tpg|DAA55100.1| TPA:
           hypothetical protein ZEAMMB73_905907 [Zea mays]
          Length = 700

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT+LARSG++  A  LF  M  RNTVTYN+M+SA A++G + +AR LFD 
Sbjct: 15  ASAVFRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDG 74

Query: 9   MP 4
           MP
Sbjct: 75  MP 76



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = -3

Query: 168 NLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQMP 4
           N  L+ LAR GRI+EA ALF GM  RNTV++N+MI+A + +G V DAR LFD+MP
Sbjct: 53  NAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMP 107


>gb|EMT26142.1| hypothetical protein F775_09158 [Aegilops tauschii]
          Length = 700

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/68 (50%), Positives = 46/68 (67%)
 Frame = -3

Query: 204 VLGCRAGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDAR 25
           V       VF  N +LT+LARSG++  A  LF  M  RNTV+YN+M+SA A++G + DAR
Sbjct: 9   VAAAATSAVFRSNQELTRLARSGQLAAARRLFDEMPHRNTVSYNAMLSALARHGRLADAR 68

Query: 24  ILFDQMPR 1
            LFD++PR
Sbjct: 69  RLFDEIPR 76


>ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
           gi|77554360|gb|ABA97156.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa
           Japonica Group]
          Length = 756

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT LARSG++  A  LF  M  RN V+YN+M+SA A +G + +AR LFD+
Sbjct: 8   ASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDE 67

Query: 9   MPR 1
           MPR
Sbjct: 68  MPR 70


>gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
          Length = 841

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT LARSG++  A  LF  M  RN V+YN+M+SA A +G + +AR LFD+
Sbjct: 8   ASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDE 67

Query: 9   MPR 1
           MPR
Sbjct: 68  MPR 70


>gb|EEC69117.1| hypothetical protein OsI_38034 [Oryza sativa Indica Group]
          Length = 551

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -3

Query: 189 AGLVFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQ 10
           A  VF  N +LT LARSG++  A  LF  M  RN V+YN+M+SA A +G + +AR LFD+
Sbjct: 8   ASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDE 67

Query: 9   MPR 1
           MPR
Sbjct: 68  MPR 70


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -3

Query: 180 VFAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQMP 4
           +++ N K++   R+GRI EA ALF  +  RNTVT+NSMIS Y K G +  AR LFD+MP
Sbjct: 47  LYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMP 105


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = -3

Query: 177 FAQNLKLTQLARSGRIEEAIALFHGMITRNTVTYNSMISAYAKNGYVVDARILFDQM 7
           F  N ++ QL + G++EEAI +F  M  +N VTYNSMIS  AKN  + DAR LFDQM
Sbjct: 18  FNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM 74