BLASTX nr result

ID: Zingiber25_contig00034071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00034071
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454229.1| hypothetical protein SORBIDRAFT_04g027140 [S...    58   1e-06
ref|XP_002453462.1| hypothetical protein SORBIDRAFT_04g006290 [S...    58   1e-06
ref|XP_006648872.1| PREDICTED: cell wall protein AWA1-like [Oryz...    57   3e-06

>ref|XP_002454229.1| hypothetical protein SORBIDRAFT_04g027140 [Sorghum bicolor]
           gi|241934060|gb|EES07205.1| hypothetical protein
           SORBIDRAFT_04g027140 [Sorghum bicolor]
          Length = 651

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 175 NENA-ASNQVQFHSRSSSRKTERSPFRRNPMAEIDENSVKTGQNLSIDHKKSSERSA 8
           NENA A+      SRSSSRK E+SP+RRNPMAE+DENS++   N S   +K S  +A
Sbjct: 281 NENAGAAGPTPVLSRSSSRKNEQSPYRRNPMAELDENSLRNNSNHSAKPQKKSTETA 337


>ref|XP_002453462.1| hypothetical protein SORBIDRAFT_04g006290 [Sorghum bicolor]
           gi|241933293|gb|EES06438.1| hypothetical protein
           SORBIDRAFT_04g006290 [Sorghum bicolor]
          Length = 235

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 175 NENA-ASNQVQFHSRSSSRKTERSPFRRNPMAEIDENSVKTGQNLSIDHKKSSERSA 8
           NENA A+      SRSSSRK E+SP+RRNPMAE+DENS++   N S   +K S  +A
Sbjct: 103 NENAGAAGPTPMLSRSSSRKNEQSPYRRNPMAELDENSLRNNSNHSARPQKKSTETA 159


>ref|XP_006648872.1| PREDICTED: cell wall protein AWA1-like [Oryza brachyantha]
          Length = 393

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
 Frame = -3

Query: 181 LSNENAASNQVQFH-----SRSSSRKTERSPFRRNPMAEIDENSVKTGQNLSIDHKKSSE 17
           + NENA   QV        SRSSSRK E+SP+RR+PMAEIDENS+    N    HKKSSE
Sbjct: 37  VGNENAGGGQVTAGQTPSLSRSSSRKAEQSPYRRSPMAEIDENSLH--NNNGNPHKKSSE 94

Query: 16  RS 11
            +
Sbjct: 95  NA 96


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