BLASTX nr result
ID: Zingiber25_contig00034032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00034032
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari... 122 5e-26
tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea m... 120 1e-25
ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setari... 119 3e-25
ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [S... 119 3e-25
dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica G... 118 7e-25
ref|XP_006658750.1| PREDICTED: protein SHORT-ROOT 1-like [Oryza ... 118 7e-25
gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japo... 118 7e-25
sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltNa... 118 7e-25
ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group] g... 118 7e-25
dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare] 117 2e-24
ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299... 117 2e-24
gb|ACN33432.1| unknown [Zea mays] 117 2e-24
gb|ACN28549.1| unknown [Zea mays] 117 2e-24
ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [S... 117 2e-24
gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japo... 116 4e-24
sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltNa... 116 4e-24
ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group] g... 116 4e-24
ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachy... 115 5e-24
tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea m... 113 2e-23
dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil] 113 2e-23
>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
Length = 635
Score = 122 bits (306), Expect = 5e-26
Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ESAERR+TGA W+RRMR+AGF PV + DD+ DD+R+LLRRYREGWS+R
Sbjct: 547 RAIVDLVSCPASESAERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWSLR 606
Query: 181 -XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VW SAW+P
Sbjct: 607 EPGTDDGAAAGVFLAWKEQPVVWTSAWRP 635
>tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea mays]
Length = 630
Score = 120 bits (302), Expect = 1e-25
Identities = 53/89 (59%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLVACPA+ES ERR+TGA W+RRMR+AGF PV + DD+ DD+R+LLRRYREGW++R
Sbjct: 542 RAIVDLVACPASESVERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWTLR 601
Query: 181 -XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VW SAW+P
Sbjct: 602 EPGADDGAAAGVFLAWKEQPVVWTSAWRP 630
>ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setaria italica]
Length = 594
Score = 119 bits (299), Expect = 3e-25
Identities = 54/90 (60%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 505 RAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 564
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAWKP
Sbjct: 565 DAGLDDSAAGAGVFLAWKEQPLVWASAWKP 594
>ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [Sorghum bicolor]
gi|241921509|gb|EER94653.1| hypothetical protein
SORBIDRAFT_01g031720 [Sorghum bicolor]
Length = 664
Score = 119 bits (299), Expect = 3e-25
Identities = 52/89 (58%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+TGA W+RRMR+AGF PV + DD+ DD+R+LLRRYREGW++R
Sbjct: 576 RAIVDLVSCPASESVERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWTLR 635
Query: 181 -XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VW SAW+P
Sbjct: 636 EPGADDGVAAGVFLAWKEQPVVWTSAWRP 664
>dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica Group]
gi|50509213|dbj|BAD30442.1| short-root protein-like
[Oryza sativa Japonica Group]
Length = 629
Score = 118 bits (296), Expect = 7e-25
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 540 RAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 599
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 600 EAGTDDSAAGAGVFLAWKEQPLVWASAWRP 629
>ref|XP_006658750.1| PREDICTED: protein SHORT-ROOT 1-like [Oryza brachyantha]
Length = 395
Score = 118 bits (296), Expect = 7e-25
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 306 RAIVDLVSCPASESMERRETAAAWARRMRSAGFSPVPFSEDVADDVRSLLRRYREGWSMR 365
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 366 EAGTEDSAAGAGVFLAWKEQPLVWASAWRP 395
>gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japonica Group]
Length = 584
Score = 118 bits (296), Expect = 7e-25
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 495 RAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 554
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 555 EAGTDDSAAGAGVFLAWKEQPLVWASAWRP 584
>sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
gi|125558981|gb|EAZ04517.1| hypothetical protein
OsI_26668 [Oryza sativa Indica Group]
Length = 602
Score = 118 bits (296), Expect = 7e-25
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 513 RAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 572
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 573 EAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602
>ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group]
gi|182691590|sp|Q8H2X8.2|SHR1_ORYSJ RecName:
Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
gi|113611669|dbj|BAF22047.1| Os07g0586900 [Oryza sativa
Japonica Group] gi|215768016|dbj|BAH00245.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 602
Score = 118 bits (296), Expect = 7e-25
Identities = 53/90 (58%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 513 RAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 572
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 573 EAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602
>dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 117 bits (293), Expect = 2e-24
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RR+R+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 508 RAIVDLVSCPASESMERRETAAAWARRLRSAGFSPVPFSEDVADDVRSLLRRYREGWSMR 567
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 568 EASTDESAAGAGVFLAWKEQPLVWASAWRP 597
>ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299|gb|ACN34225.1| unknown
[Zea mays] gi|414887363|tpg|DAA63377.1| TPA:
hypothetical protein ZEAMMB73_763916 [Zea mays]
Length = 592
Score = 117 bits (293), Expect = 2e-24
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR++GF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 503 RAIVDLVSCPASESMERRETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMR 562
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 563 DAGLDDSAAGAGVFLAWKEQPLVWASAWRP 592
>gb|ACN33432.1| unknown [Zea mays]
Length = 592
Score = 117 bits (293), Expect = 2e-24
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR++GF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 503 RAIVDLVSCPASESMERRETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMR 562
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 563 DAGLDDSAAGAGVFLAWKEQPLVWASAWRP 592
>gb|ACN28549.1| unknown [Zea mays]
Length = 237
Score = 117 bits (293), Expect = 2e-24
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RRMR++GF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 148 RAIVDLVSCPASESMERRETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMR 207
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 208 DAGLDDSAAGAGVFLAWKEQPLVWASAWRP 237
>ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [Sorghum bicolor]
gi|241924318|gb|EER97462.1| hypothetical protein
SORBIDRAFT_02g037890 [Sorghum bicolor]
Length = 598
Score = 117 bits (292), Expect = 2e-24
Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 509 RAIVDLVSCPASESMERRETAVSWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 568
Query: 181 --XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 569 DAGLDDSAAGAGVFLAWKEQPLVWASAWRP 598
>gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japonica Group]
Length = 584
Score = 116 bits (290), Expect = 4e-24
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA++SAERR+T A W+RRMR+AGF P + +D+ DD+R+LLRRY+EGWSMR
Sbjct: 491 RAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMR 550
Query: 181 ------XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAWKP
Sbjct: 551 DAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 584
>sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltName: Full=OsSHR2
gi|125544429|gb|EAY90568.1| hypothetical protein
OsI_12169 [Oryza sativa Indica Group]
Length = 603
Score = 116 bits (290), Expect = 4e-24
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA++SAERR+T A W+RRMR+AGF P + +D+ DD+R+LLRRY+EGWSMR
Sbjct: 510 RAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMR 569
Query: 181 ------XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAWKP
Sbjct: 570 DAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603
>ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group]
gi|75137668|sp|Q75I13.1|SHR2_ORYSJ RecName: Full=Protein
SHORT-ROOT 2; AltName: Full=OsSHR2
gi|41469537|gb|AAS07303.1| putative GRAS family
transcription factor [Oryza sativa Japonica Group]
gi|108708985|gb|ABF96780.1| GRAS family transcription
factor containing protein, expressed [Oryza sativa
Japonica Group] gi|255674615|dbj|BAH92215.1|
Os03g0433200 [Oryza sativa Japonica Group]
Length = 603
Score = 116 bits (290), Expect = 4e-24
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA++SAERR+T A W+RRMR+AGF P + +D+ DD+R+LLRRY+EGWSMR
Sbjct: 510 RAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMR 569
Query: 181 ------XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FLAW+++P VWASAWKP
Sbjct: 570 DAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603
>ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachypodium distachyon]
Length = 610
Score = 115 bits (289), Expect = 5e-24
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CPA+ES ERR+T A W+RR+R AGF PV + DD+ DD+R+LLRRYREGWSMR
Sbjct: 520 RAIVDLVSCPASESMERRETAAAWARRLRCAGFSPVAFSDDVADDVRSLLRRYREGWSMR 579
Query: 181 ---XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FL W+++P VWASAW+P
Sbjct: 580 DAGAEDSAAAGAGVFLQWKEQPLVWASAWRP 610
>tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea mays]
Length = 586
Score = 113 bits (283), Expect = 2e-23
Identities = 50/90 (55%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLV+CP ++S ERR+T W+RRMR+AGF PV + +D+ DD+R+LLRRYREGWSMR
Sbjct: 497 RAIVDLVSCPPSKSMERRETAVSWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMR 556
Query: 181 XXXXXXXXXXT--FLAWRDKPSVWASAWKP 264
FLAW+++P VWASAW+P
Sbjct: 557 DTGLDDSAAGAGIFLAWKEQPLVWASAWRP 586
>dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]
Length = 505
Score = 113 bits (283), Expect = 2e-23
Identities = 50/88 (56%), Positives = 65/88 (73%)
Frame = +1
Query: 1 RAVMDLVACPAAESAERRDTGARWSRRMRTAGFEPVEYCDDMTDDLRALLRRYREGWSMR 180
RA++DLVACP ++S ERR+T RWSRR+ AGF P+ Y D++ DD+RALLRRYREGW+M
Sbjct: 419 RAIVDLVACPPSQSIERRETAERWSRRLHAAGFTPIPYSDEVCDDVRALLRRYREGWTM- 477
Query: 181 XXXXXXXXXXTFLAWRDKPSVWASAWKP 264
FL+W+D+P VWASAW+P
Sbjct: 478 APCSGDLSAGIFLSWKDQPVVWASAWRP 505