BLASTX nr result

ID: Zingiber25_contig00033986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033986
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004288191.1| PREDICTED: 50S ribosomal protein L29, chloro...    61   1e-07
ref|XP_006428206.1| hypothetical protein CICLE_v10026623mg [Citr...    58   1e-06
gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]           58   1e-06
ref|XP_006853142.1| hypothetical protein AMTR_s00038p00170150 [A...    57   3e-06
gb|EOX92100.1| Ribosomal L29 family protein [Theobroma cacao]          56   6e-06
gb|EPS74411.1| hypothetical protein M569_00347, partial [Genlise...    55   7e-06

>ref|XP_004288191.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 174

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
 Frame = +3

Query: 72  ISLLPSST--------SPHVPASFFSLRILHRVIXXXXXXXXXXXXGISPGE---LMAKR 218
           IS+ P ST        SP   +SF  LR+ H                 SP     +MAKR
Sbjct: 5   ISIAPPSTVVLPQKLLSPIPKSSFTGLRLQHVCPVAIRLPTASFRRSSSPSSSVVMMAKR 64

Query: 219 EKEMSAIRLKMTKEINKE-VDLRAKLFVLRVQKSA*NEFKS 338
           E+EM  IR K T+EIN+E VDL+ +LF+LR+QKSA NEF S
Sbjct: 65  EEEMKEIRTKTTEEINEEVVDLKGELFMLRLQKSARNEFTS 105


>ref|XP_006428206.1| hypothetical protein CICLE_v10026623mg [Citrus clementina]
           gi|568819405|ref|XP_006464243.1| PREDICTED: 50S
           ribosomal protein L29, chloroplastic-like [Citrus
           sinensis] gi|557530196|gb|ESR41446.1| hypothetical
           protein CICLE_v10026623mg [Citrus clementina]
          Length = 171

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 186 GISPGELMAKREKEMSAIRLKMTKEINKE-VDLRAKLFVLRVQKSA*NEFKS 338
           G S   +MAKRE+EM  IR K T+EIN+E VDL+ +LF+LR+QKS  NEFKS
Sbjct: 54  GSSTVVMMAKREEEMKEIRAKTTEEINEEVVDLKGELFMLRLQKSVRNEFKS 105


>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
          Length = 178

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +3

Query: 204 LMAKREKEMSAIRLKMTKEINKE-VDLRAKLFVLRVQKSA*NEFKS 338
           +MAKRE+E+  IR K T+EIN+E VDL+ +LF+LR+QKSA NEFKS
Sbjct: 61  MMAKREEELKEIRTKTTEEINEEIVDLKGELFMLRLQKSARNEFKS 106


>ref|XP_006853142.1| hypothetical protein AMTR_s00038p00170150 [Amborella trichopoda]
           gi|548856781|gb|ERN14609.1| hypothetical protein
           AMTR_s00038p00170150 [Amborella trichopoda]
          Length = 130

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = +3

Query: 201 ELMAKREKEMSAIRLKMTKEINKE-VDLRAKLFVLRVQKSA*NEFKS 338
           ++MAKRE+E+  IR K T+EIN+E VDL+ +LF+LR+QKSA NEFKS
Sbjct: 82  KMMAKREEELKDIRGKTTEEINEEIVDLKGELFMLRLQKSARNEFKS 128


>gb|EOX92100.1| Ribosomal L29 family protein [Theobroma cacao]
          Length = 219

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +3

Query: 204 LMAKREKEMSAIRLKMTKEINKE-VDLRAKLFVLRVQKSA*NEFKS 338
           +MAKRE+EM  IR K T+EIN+E V+L+ +LF+LR+QKS  NEFKS
Sbjct: 107 MMAKREEEMKEIRAKTTEEINEEVVELKGELFMLRLQKSVRNEFKS 152


>gb|EPS74411.1| hypothetical protein M569_00347, partial [Genlisea aurea]
          Length = 144

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +3

Query: 111 ASFFSLRILHRVIXXXXXXXXXXXXGISPGELMAKREKEMSAIRLKMTKEINKE-VDLRA 287
           +S + +RI H +             G+    +MAKR++E+  IR K T+EIN+E VDL+ 
Sbjct: 5   SSLYGVRISHNMCRLLRCRCSPPSSGVM---MMAKRDEELKEIRAKSTQEINEEIVDLKG 61

Query: 288 KLFVLRVQKSA*NEFKS 338
           +L +LR+Q+SA NEFKS
Sbjct: 62  ELLMLRLQRSARNEFKS 78


Top