BLASTX nr result

ID: Zingiber25_contig00033813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033813
         (339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    60   2e-11
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    70   2e-10
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   1e-09
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...    67   2e-09
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...    66   4e-09
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        59   1e-08
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...    58   2e-08
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...    62   8e-08
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...    62   8e-08
ref|XP_006607072.1| PREDICTED: putative ribonuclease H protein A...    61   1e-07
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    60   3e-07
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    59   7e-07
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    59   9e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    58   1e-06
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    50   1e-06
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            50   1e-06
ref|XP_006574043.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06
ref|XP_006574197.1| PREDICTED: uncharacterized protein LOC102667...    57   3e-06

>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 60.1 bits (144), Expect(2) = 2e-11
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
 Frame = +3

Query: 117 FVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR* 281
           F+W+     S+  P++W  IC P   GG  + D+  WN+A L K LW +    DSLWV+ 
Sbjct: 217 FLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKW 276

Query: 282 VHQHYLKGIDFWQWEVK 332
           +  +Y+K  +    E+K
Sbjct: 277 IQAYYVKRSELMHIEMK 293



 Score = 34.3 bits (77), Expect(2) = 2e-11
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 56  TCYWLSMFPIPDGVIDKIKYICLVF 130
           T YWL+ FP P  V+ KI+ IC +F
Sbjct: 193 TNYWLNCFPFPKSVLQKIEAICRIF 217


>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
 Frame = +3

Query: 60  VIGYLCSLFPMVS------LTRSNTFVWSSK-----YPPISWATICLPWHDGGYGLCDLH 206
           +  +  S+FP+        +     F+W         P ++W+ +C P  +GG GL +L 
Sbjct: 132 IANFWMSIFPLPQSVLDTIIATCRNFLWGKADGGKIKPLVAWSEVCTPKKEGGLGLFNLK 191

Query: 207 AWNEALLSKTLWEIQFNADSLWVR*VHQHYLKGIDFWQW 323
            WN ALLS  LW++    DSLWVR VH +Y KG + W +
Sbjct: 192 DWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWDF 230


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 63.9 bits (154), Expect(2) = 1e-09
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = +3

Query: 117  FVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR* 281
            F+W+     +K  P++WATI  P   GG+ + ++  WN A + K LW I+F  D LWVR 
Sbjct: 831  FLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRW 890

Query: 282  VHQHYLKGID 311
            +H +Y+K  D
Sbjct: 891  IHSYYIKRQD 900



 Score = 24.3 bits (51), Expect(2) = 1e-09
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 62  YWLSMFPIPDGVIDKIKYICLVF 130
           YW  +FP+   VI  ++ +C  F
Sbjct: 809 YWAHIFPLSKKVIQAVEKVCRKF 831


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
 Frame = +3

Query: 60  VIGYLCSLFPMVS--LTRSNT----FVWSS-----KYPPISWATICLPWHDGGYGLCDLH 206
           ++ +   +FP+    L R N     F+WS        P ++W  +C P  +GG GL +L 
Sbjct: 177 IMNFWMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLK 236

Query: 207 AWNEALLSKTLWEIQFNADSLWVR*VHQHYLKGIDFWQWEVKAS 338
            WN ALLS  LW+     DSL VR VH +Y +  D W + + +S
Sbjct: 237 DWNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWNYNISSS 280


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
 Frame = +3

Query: 60  VIGYLCSLFPMVS--LTRSNT----FVWSS-----KYPPISWATICLPWHDGGYGLCDLH 206
           ++ +   +FP+    L R N     F+W       K P ++W+ +C P  +GG GL +L 
Sbjct: 144 IVNFWIGIFPLPQSVLDRINASCRNFLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLK 203

Query: 207 AWNEALLSKTLWEIQFNADSLWVR*VHQHYLKGIDFWQWEVKAS 338
            WN ALLS  LW+     DSLW   VH +Y +  D W +   +S
Sbjct: 204 DWNLALLSCILWDFHCKKDSLW---VHHYYFRRSDVWNYNTSSS 244


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 58.5 bits (140), Expect(2) = 1e-08
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = +3

Query: 117  FVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR* 281
            F+WS     +K   +SWA +CLP  +GG GL  L  WN+ L  + +W +    DSLW   
Sbjct: 839  FLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADW 898

Query: 282  VHQHYLKGIDFWQWE 326
             H H+L    FW  E
Sbjct: 899  QHLHHLSRGSFWAVE 913



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 62  YWLSMFPIPDGVIDKIKYICLVF 130
           +W+S F +P G I +I+ +C  F
Sbjct: 817 FWMSTFLLPKGCIKRIESLCSRF 839


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score = 58.2 bits (139), Expect(2) = 2e-08
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = +3

Query: 114 TFVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR 278
           +FVWS     ++  PI+W ++C P   GG  + +L  WN   +   LW +    D+LWV+
Sbjct: 658 SFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVK 717

Query: 279 *VHQHYLK 302
            +H HY+K
Sbjct: 718 WIHAHYIK 725



 Score = 25.8 bits (55), Expect(2) = 2e-08
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 62  YWLSMFPIPDGVIDKIKYICLVF 130
           +W+   PIP  VI KI  +C  F
Sbjct: 637 FWMQCLPIPMSVIKKIDSMCRSF 659


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
 Frame = +3

Query: 75  CSLFPMVSLTRSN----TFVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALL 227
           C   P   + R N    +F+W      S+  PI+W  +C P  +GG  + +L  WN+  +
Sbjct: 641 CLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISI 700

Query: 228 SKTLWEIQFNADSLWVR*VHQHYLKGIDFWQWEVKAS 338
            K LW +   +D+LW++ +H +Y++G   W   +K S
Sbjct: 701 LKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKS 737


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
 Frame = +3

Query: 114 TFVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR 278
           +++WS     +K   I+W  +C P ++GG GL +L  WN + ++K  W++    D LW++
Sbjct: 638 SYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIK 697

Query: 279 *VHQHYLKGIDFWQWEVKAS 338
            +H +Y+KG   W+    AS
Sbjct: 698 WIHAYYIKGQREWKKSNTAS 717


>ref|XP_006607072.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 217

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
 Frame = +3

Query: 69  YLCSLFPMVS------LTRSNTFVW-----SSKYPPISWATICLPWHDGGYGLCDLHAWN 215
           YL S F + S       +    F+W     +SK P ++W T+CLP H GG G+ DL  +N
Sbjct: 18  YLLSFFRIPSKVVHKITSIQRNFLWGGGNEASKIPWVNWDTVCLPKHKGGLGIKDLKKFN 77

Query: 216 EALLSKTLWEIQFNADSLWVR*VHQHY 296
           EALL K  WE+  N +  W R V   Y
Sbjct: 78  EALLGKWGWELATNQNHFWARIVMSKY 104


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
 Frame = +3

Query: 60  VIGYLCSLFPMVS--LTRSNT----FVWSS-----KYPPISWATICLPWHDGGYGLCDLH 206
           ++ +   +FP+    L R N     F+W           I+W+ +C P  +GG GL +L 
Sbjct: 144 IVNFWMKIFPLSQSVLDRINASCCNFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLK 203

Query: 207 AWNEALLSKTLWEIQFNADSLWVR*VHQHYLKGID 311
            WN  LLS+ LW+     D LWVR VH +Y +  D
Sbjct: 204 DWNLTLLSRILWDFHCKKDFLWVRWVHHYYFRASD 238


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
 Frame = +3

Query: 105 RSNTFVWSSKYP-----PISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSL 269
           R   F+W+          ++W+ ICLP  +GG G+ DLH WN+AL+   +W +  ++ + 
Sbjct: 664 RLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNF 723

Query: 270 WVR*VHQHYLKGIDFW 317
           W   V  + LKG  FW
Sbjct: 724 WTDWVKVYLLKGNSFW 739


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = +3

Query: 144 ISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR*VHQHYLKGIDFWQW 323
           ++W  +CLP+ +GG  +CD  +WN+A   K LW +   + SLWV  V  + LKG   W+ 
Sbjct: 312 VAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEI 371

Query: 324 EVKA 335
           +  A
Sbjct: 372 DAGA 375


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
 Frame = +3

Query: 69  YLCSLFPMV--------SLTRSNTFVWSS-----KYPPISWATICLPWHDGGYGLCDLHA 209
           Y  S+FPM         S+ RS  F+WS      +   ++W  +C P   GG  L +L  
Sbjct: 298 YWMSVFPMPKKVIQKIDSICRS--FIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLEL 355

Query: 210 WNEALLSKTLWEIQFNADSLWVR*VHQHYLKGIDFWQWEVKAS 338
           WN   + K LW I    D+LWV+ +H ++LKG +     +K++
Sbjct: 356 WNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSN 398


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
 Frame = +3

Query: 111  NTFVWS-----SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWV 275
            + F+WS     S    ISW  +C P  +GG GL  L   N+    K +W+I  +++SLWV
Sbjct: 844  SAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWV 903

Query: 276  R*VHQHYLKGIDFWQ 320
            + V QH L+   FW+
Sbjct: 904  KWVDQHLLRNASFWE 918


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = +3

Query: 117 FVWSS-----KYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR* 281
           F+W+      K   +SW   CLP  +GG G      WN+ LL + +W +     SLW + 
Sbjct: 699 FLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQW 758

Query: 282 VHQHYLKGIDFWQ 320
              H L    FWQ
Sbjct: 759 QRHHRLGHASFWQ 771



 Score = 27.3 bits (59), Expect(2) = 1e-06
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 62  YWLSMFPIPDGVIDKIKYICLVF 130
           +W+S F +P G I KI+ +C  F
Sbjct: 677 FWMSTFLLPKGCIKKIESLCSKF 699


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = +3

Query: 117 FVWSS-----KYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR* 281
           F+W+      K   +SW   CLP  +GG G      WN+ LL + +W +     SLW + 
Sbjct: 699 FLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQW 758

Query: 282 VHQHYLKGIDFWQ 320
              H L    FWQ
Sbjct: 759 QRHHRLGHASFWQ 771



 Score = 27.3 bits (59), Expect(2) = 1e-06
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 62  YWLSMFPIPDGVIDKIKYICLVF 130
           +W+S F +P G I KI+ +C  F
Sbjct: 677 FWMSTFLLPKGCIKKIESLCSKF 699


>ref|XP_006574043.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 295

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
 Frame = +3

Query: 69  YLCSLFPMVS------LTRSNTFVWSS-----KYPPISWATICLPWHDGGYGLCDLHAWN 215
           YL S F +        +T    F+W       K P + W TICLP  +GG G+ ++  +N
Sbjct: 18  YLLSFFKIPQKVAHRLVTLQRNFLWGGDKDYKKIPWVKWETICLPKEEGGLGIKEISKFN 77

Query: 216 EALLSKTLWEIQFNADSLWVR*VHQHY 296
           EALL K +W++  +   LW R +   Y
Sbjct: 78  EALLGKWIWDLASDQQQLWARIIKSKY 104


>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 727

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +3

Query: 102 TRSNTFVWS-SKYPPISWATICLPWHDGGYGLCDLHAWNEALLSKTLWEIQFNADSLWVR 278
           T S +F+W  SK PP++W  +C P   GG G+     +N+A ++K  W+I  +  + WV+
Sbjct: 251 TESRSFLWGDSKNPPVAWEQVCTPKSIGGLGIRPSAYFNKAAVAKLGWKIIMDHSNWWVQ 310

Query: 279 *VHQHYLKGIDFWQWEVKAS 338
            V   YLK   F++ + K+S
Sbjct: 311 IVKNKYLKNHSFFETKKKSS 330


>ref|XP_006574197.1| PREDICTED: uncharacterized protein LOC102667859 [Glycine max]
          Length = 347

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
 Frame = +3

Query: 69  YLCSLFPMVS------LTRSNTFVWSS-----KYPPISWATICLPWHDGGYGLCDLHAWN 215
           YL S F +        L+    F+W       K P + W  ICLP +DGG G+ DL  +N
Sbjct: 95  YLLSFFKIPQRIVDKLLSLQRNFMWGGNQDHKKIPSVKWDVICLPKNDGGLGIKDLSKFN 154

Query: 216 EALLSKTLWEIQFNADSLWVR*VHQHY 296
            AL    +W++ FN   LWV  ++  Y
Sbjct: 155 AALRGTWIWDLSFNQYQLWVTVLNSKY 181


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