BLASTX nr result

ID: Zingiber25_contig00033795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033795
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...    62   8e-08
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]    57   3e-06
gb|ESW09673.1| hypothetical protein PHAVU_009G146500g [Phaseolus...    55   1e-05
gb|ESW09672.1| hypothetical protein PHAVU_009G146500g [Phaseolus...    55   1e-05
gb|ESW09671.1| hypothetical protein PHAVU_009G146500g [Phaseolus...    55   1e-05

>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/60 (60%), Positives = 40/60 (66%), Gaps = 10/60 (16%)
 Frame = +1

Query: 52  MDFDEYEYLEKAVEEPEARKDKD----RSGSRRHKDRGED------GEGRASKRSRPEEQ 201
           MDFDEYEYLEKAVEEPE RK KD       S R ++ GE+      GEGR SKRSR EE+
Sbjct: 1   MDFDEYEYLEKAVEEPENRKKKDGGEKSERSYRKREGGEEDDDDERGEGRRSKRSRGEEE 60


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/84 (46%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
 Frame = +1

Query: 52  MDFDEYEYLEKAVEEPEARKDKD----RSGSRRHKDRGED------GEGRASKRSRPEEQ 201
           MDFDEYEYLEKAVEEPE RK KD       S R ++ GE+      GEGR SKR    E 
Sbjct: 1   MDFDEYEYLEKAVEEPENRKKKDGGEKSERSYRKREGGEEDDDDERGEGRRSKRRERHE- 59

Query: 202 NGXXXXXXXXXXXXXXAKDRRKSG 273
                            KDRR+SG
Sbjct: 60  -----------------KDRRRSG 66


>gb|ESW09673.1| hypothetical protein PHAVU_009G146500g [Phaseolus vulgaris]
          Length = 592

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
 Frame = +1

Query: 52  MDFDEYEYLEKAVEEPE----ARKDKDRSGSRRHKDRGEDG-EGRASKRSRPEEQNG 207
           MDFDEYEYLEK VEE E    +RK K+   S R +D  +DG E R +KRSR +++NG
Sbjct: 1   MDFDEYEYLEKTVEEQEDRDSSRKKKETERSYRKRDGIDDGSEERKNKRSRGDDENG 57


>gb|ESW09672.1| hypothetical protein PHAVU_009G146500g [Phaseolus vulgaris]
          Length = 590

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
 Frame = +1

Query: 52  MDFDEYEYLEKAVEEPE----ARKDKDRSGSRRHKDRGEDG-EGRASKRSRPEEQNG 207
           MDFDEYEYLEK VEE E    +RK K+   S R +D  +DG E R +KRSR +++NG
Sbjct: 1   MDFDEYEYLEKTVEEQEDRDSSRKKKETERSYRKRDGIDDGSEERKNKRSRGDDENG 57


>gb|ESW09671.1| hypothetical protein PHAVU_009G146500g [Phaseolus vulgaris]
          Length = 591

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
 Frame = +1

Query: 52  MDFDEYEYLEKAVEEPE----ARKDKDRSGSRRHKDRGEDG-EGRASKRSRPEEQNG 207
           MDFDEYEYLEK VEE E    +RK K+   S R +D  +DG E R +KRSR +++NG
Sbjct: 1   MDFDEYEYLEKTVEEQEDRDSSRKKKETERSYRKRDGIDDGSEERKNKRSRGDDENG 57


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