BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033491
         (684 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]        286   4e-75
ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [S...   285   1e-74
ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group] g...   281   1e-73
ref|XP_006647686.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii]    280   2e-73
dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]    280   2e-73
ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containi...   279   5e-73
gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indi...   279   5e-73
ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containi...   266   3e-69
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   261   1e-67
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof...   260   3e-67
gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [...   259   5e-67
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   259   7e-67
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   258   9e-67
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   258   1e-66
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   258   1e-66
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   258   2e-66
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   254   2e-65

>gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
          Length = 501

 Score =  286 bits (732), Expect = 4e-75
 Identities = 139/227 (61%), Positives = 172/227 (75%)
 Frame = -3

Query: 682 RGGPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCI 503
           R G  D  C+PDVVSYTT++HGLG+AG L KARKVFDEM  EGC PS ATYNALIQV C 
Sbjct: 272 RRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCK 331

Query: 502 KGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQT 323
           KG ++DA+ +FD++ RKGY PN +TY +LIRGLCHAG++  AM    RMK + CEPNVQT
Sbjct: 332 KGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQT 391

Query: 322 FNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMV 143
           +N+LIR+                M + E CLPN DTYN+IISAMF R+R+EDM VA +MV
Sbjct: 392 YNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMV 451

Query: 142 MEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           +EMV+RG+LPRKFMFNRVLNGL++TGNQE ++ LLR+QEK+  L R+
Sbjct: 452 VEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELLRMQEKYTRLRRE 498



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
 Frame = -3

Query: 547 PSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDF 368
           P   TYN L    C       A+ +  ++   G  P   TYN++++G   +G++  A DF
Sbjct: 207 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDF 266

Query: 367 FRRMKL-----DNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVI 203
           F +MK      +NC+P+V ++  ++                  M   E C P+  TYN +
Sbjct: 267 FLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEM-SIEGCKPSTATYNAL 325

Query: 202 ISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
           I     +   ED   A  +  +MV +G++P    +  ++ GL   G    A  LL   + 
Sbjct: 326 IQVTCKKGNLED---AVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKS 382

Query: 22  HKC 14
             C
Sbjct: 383 EGC 385


>ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
           gi|241932588|gb|EES05733.1| hypothetical protein
           SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  285 bits (728), Expect = 1e-74
 Identities = 136/225 (60%), Positives = 172/225 (76%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PDVVSYTT++HGLG+AG L KARKVFDEM  EGC PS+ATYNALIQV C KG
Sbjct: 275 GSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKG 334

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD++ RKGY PN +TY +LIRGLCHAG+++ AM    +MK + CEPNVQT+N
Sbjct: 335 NVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYN 394

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LI +                M + E CLPN DTYN+IISAMF R+R+EDM VA +MV+E
Sbjct: 395 VLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 454

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MV+RG+LPR+FMFNRVLNGL++TGNQE ++ LLR+QEK+  L R+
Sbjct: 455 MVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEKYTRLRRE 499



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
 Frame = -3

Query: 547 PSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDF 368
           P   TYN L    C       A+ +  ++   G  P   TYN++++G   +G++  A DF
Sbjct: 208 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDF 267

Query: 367 FRRMKL-----DNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVI 203
           F +MK      +NC+P+V ++  ++                  M  +E C P++ TYN +
Sbjct: 268 FLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEM-SREGCTPSIATYNAL 326

Query: 202 ISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
           I     +   ED   A  +  +M+ +G++P    +  ++ GL   G  + A  LL   ++
Sbjct: 327 IQVTCKKGNVED---AVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKR 383

Query: 22  HKC 14
             C
Sbjct: 384 EGC 386


>ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
           gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza
           sativa Japonica Group]
          Length = 491

 Score =  281 bits (719), Expect = 1e-73
 Identities = 136/225 (60%), Positives = 171/225 (76%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PDVVSYTTMVHGLG+AG L+KARKVFDEM  EGC PSVATYNALIQV C KG
Sbjct: 264 GSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKG 323

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD +  KGY PN +TY +LIRGLCHAG+++  +    RMK   CEP VQT+N
Sbjct: 324 NVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYN 383

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               +M + E CLPN DTYN+IISAMF R+R+EDM++A +MV E
Sbjct: 384 VLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEE 443

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MV+RG+LPR+FMFNRVLNGL++TGNQE ++ LLR+QEK++ L R+
Sbjct: 444 MVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQEKYRRLQRE 488



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 5/183 (2%)
 Frame = -3

Query: 547 PSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDF 368
           P V TYN L    C       A+ +   +   G  P   TYN++++G   AG++  A DF
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256

Query: 367 FRRMKL-----DNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVI 203
           F +MK      ++C+P+V ++  ++                  M  KE C P++ TYN +
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEM-AKEGCAPSVATYNAL 315

Query: 202 ISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
           I  +  +   ED   A  +   M  +G++P    +  ++ GL   G  +    LL   + 
Sbjct: 316 IQVICKKGNVED---AVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKN 372

Query: 22  HKC 14
             C
Sbjct: 373 GGC 375


>ref|XP_006647686.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Oryza brachyantha]
          Length = 495

 Score =  281 bits (718), Expect = 2e-73
 Identities = 135/225 (60%), Positives = 173/225 (76%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PDVVSYTTMVHGLG+AG L+KARKVFDEM  EGC PSVATYNALIQV C K 
Sbjct: 268 GSRDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMSKEGCTPSVATYNALIQVICKKA 327

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+++FD++  KGY PN +TY +LIRGLCHAG+++  ++   RMK   CEP VQT+N
Sbjct: 328 NVEDAVMVFDDMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLNLLERMKNGGCEPVVQTYN 387

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               +M + E CLPN DTYN+IISAMF R+R+EDM++A +MV E
Sbjct: 388 VLIRYSCQEGEMEKCLDLFEKMSKGEECLPNQDTYNIIISAMFIRKRAEDMVLAARMVEE 447

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MV+RG+LPR+FMFNRVLNGL++TGNQE ++ LLR+QEK++ L R+
Sbjct: 448 MVDRGYLPRRFMFNRVLNGLMLTGNQELSQKLLRMQEKYRRLQRE 492



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
 Frame = -3

Query: 649 DVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLF 470
           D+  + +++  L  +    KA  +   +        V TYN L    C       A+ + 
Sbjct: 167 DLALFNSLLDALSKSRHAGKAASLVRALEQRRFTADVVTYNTLADGWCRVKDTSRALDVL 226

Query: 469 DELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKL-----DNCEPNVQTFNLLIR 305
            ++   G  P   TYN++++G   AG++  A DFF +MK      ++C+P+V ++  ++ 
Sbjct: 227 RQMVESGIAPTKTTYNIVLKGFFRAGQLQHAWDFFLQMKKRGSRDESCKPDVVSYTTMVH 286

Query: 304 HWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVER 125
                            M  KE C P++ TYN +I  +  +   ED ++   +  +M+ +
Sbjct: 287 GLGVAGQLEKARKVFDEM-SKEGCTPSVATYNALIQVICKKANVEDAVM---VFDDMLVK 342

Query: 124 GHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
           G++P    +  ++ GL   G  +    LL   +   C
Sbjct: 343 GYVPNVVTYTVLIRGLCHAGKIDRGLNLLERMKNGGC 379


>gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii]
          Length = 347

 Score =  280 bits (717), Expect = 2e-73
 Identities = 133/225 (59%), Positives = 171/225 (76%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PD++SYTT++HGLG+AG L KARK+FDEM  EGC PSVATYNALIQV C KG
Sbjct: 120 GAKDESCKPDIISYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKG 179

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD++ R+ Y PN +TY +LIRGLCHAG+++ AM    RMK + CEP VQT+N
Sbjct: 180 NVEDAVTVFDDMVRQDYVPNVVTYTVLIRGLCHAGKIDRAMKLMERMKDEGCEPVVQTYN 239

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               RM + E CLPN DTYN+IISAMF R+R+EDM  A +MVME
Sbjct: 240 VLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVME 299

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MVERG+LPR+FM NRVLNGL++TGNQ+ ++ LLR+QEK++ L R+
Sbjct: 300 MVERGYLPRRFMLNRVLNGLMLTGNQQISRDLLRMQEKYRRLRRE 344



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
 Frame = -3

Query: 649 DVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLF 470
           D+  + +++  LG +    KA  +    +     P V TYN L    C       A+ L 
Sbjct: 20  DLPLFNSLLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRVKDTSRALDLL 78

Query: 469 DELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKL-----DNCEPNVQTFNLLIR 305
            ++   G TP   TYN++++G   AG++  A +FF +MK      ++C+P++ ++  +I 
Sbjct: 79  RQMAESGITPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIISYTTIIH 138

Query: 304 HWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVER 125
                            M  KE C P++ TYN +I  +  +   ED   A  +  +MV +
Sbjct: 139 GLGVAGQLDKARKLFDEM-SKEGCTPSVATYNALIQVICKKGNVED---AVTVFDDMVRQ 194

Query: 124 GHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
            ++P    +  ++ GL   G  + A  L+   +   C
Sbjct: 195 DYVPNVVTYTVLIRGLCHAGKIDRAMKLMERMKDEGC 231


>dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73
 Identities = 134/225 (59%), Positives = 170/225 (75%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PD+VSYTT++HGLG+AG L KARK+FDEM  EGC PSVATYNALIQV C KG
Sbjct: 262 GAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKG 321

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD++ RK Y PN +TY +LIRGLCH G+++ AM    RMK + CEP VQT+N
Sbjct: 322 NVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYN 381

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               RM + E CLPN DTYN+IISAMF R+R+EDM  A +MVME
Sbjct: 382 VLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVME 441

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MVERG+LPR+FM NRVLNGL++TGNQ+ ++ LLR+QEK++ L R+
Sbjct: 442 MVERGYLPRRFMLNRVLNGLMLTGNQQISRDLLRMQEKYRRLRRE 486



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
 Frame = -3

Query: 649 DVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLF 470
           D+  + +++  LG +    KA  +    +     P V TYN L    C       A+ L 
Sbjct: 162 DLPLFNSLLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRAKDTSRALDLL 220

Query: 469 DELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKL-----DNCEPNVQTFNLLIR 305
            ++   G TP   TYN++++G   AG++  A +FF +MK      ++C+P++ ++  +I 
Sbjct: 221 RQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIH 280

Query: 304 HWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVER 125
                            M  KE C P++ TYN +I  +  +   ED   A  +  +MV +
Sbjct: 281 GLGVAGQLDKARKLFDEM-SKEGCTPSVATYNALIQVICKKGNVED---AVTVFDDMVRK 336

Query: 124 GHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
            ++P    +  ++ GL   G  + A  L+   +   C
Sbjct: 337 DYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGC 373


>ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Brachypodium distachyon]
          Length = 496

 Score =  279 bits (714), Expect = 5e-73
 Identities = 132/225 (58%), Positives = 171/225 (76%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PDVVSYTT++HGLG+AG L KARK+FDEM  EGC P++ATYNALIQV C KG
Sbjct: 269 GSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKG 328

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD++ RK Y PN +TY +LIRGLCH G+++ AM    RMK + CEP VQT+N
Sbjct: 329 NVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYN 388

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               RM + E CLPN DTYN++ISAMF R+R+EDM +A +MVME
Sbjct: 389 VLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVME 448

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MVERG+LPR+FM NRVLNGL++TGNQ+ ++ LLR+QEK++ L R+
Sbjct: 449 MVERGYLPRRFMLNRVLNGLMLTGNQQLSRDLLRMQEKYRRLRRE 493



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
 Frame = -3

Query: 649 DVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLF 470
           D+  + +++  LG +    KA  +    +     P V TYN L    C       A+ L 
Sbjct: 169 DLPLFNSLLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRVKDTSRALDLL 227

Query: 469 DELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKL-----DNCEPNVQTFNLLIR 305
            ++   G  P   TYN++++G   AG++  A +FF +MK      +NC+P+V ++  +I 
Sbjct: 228 RQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIH 287

Query: 304 HWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVER 125
                            M  KE C P + TYN +I  +  +   ED   A  +  +M+ +
Sbjct: 288 GLGVAGQLDKARKLFDEM-SKEGCPPTIATYNALIQVICKKGNVED---AVTVFDDMIRK 343

Query: 124 GHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
            ++P    +  ++ GL   G  + A  L+   +   C
Sbjct: 344 DYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGC 380


>gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
          Length = 616

 Score =  279 bits (714), Expect = 5e-73
 Identities = 135/224 (60%), Positives = 169/224 (75%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D  C+PDVVSYTTMVHGLG+AG L+KARKVFDEM  EGC PSVATYNALIQV C KG
Sbjct: 264 GSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKG 323

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD +  KGY PN +TY +LIRGLCHAG+++  +    RMK   CEP VQT+N
Sbjct: 324 NVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYN 383

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               +M + E CLPN DTYN+IISAMF R+R+EDM++A +MV E
Sbjct: 384 VLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDE 443

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGR 5
           MV+RG+LPR+FMFNRVLNGL++TGNQE ++ LLR+QEK++   R
Sbjct: 444 MVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQEKYRLFER 487



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
 Frame = -3

Query: 547 PSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDF 368
           P V TYN L    C       A+ +   +   G  P   TYN++++G   AG++  A DF
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256

Query: 367 FRRMKL-----DNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVI 203
           F +MK      ++C+P+V ++  ++                  M  KE C P++ TYN +
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEM-AKEGCAPSVATYNAL 315

Query: 202 ISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
           I  +  +   ED   A  +   M+ +G++P    +  ++ GL   G  +    LL   + 
Sbjct: 316 IQVICKKGNVED---AVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKN 372

Query: 22  HKC 14
             C
Sbjct: 373 GGC 375


>ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Setaria italica]
          Length = 505

 Score =  266 bits (681), Expect = 3e-69
 Identities = 131/225 (58%), Positives = 166/225 (73%)
 Frame = -3

Query: 676 GPGDLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKG 497
           G  D   +PDVVSYTT++HGLG+AG L+KARKVFDEM  EGC PS ATYNALIQ  C KG
Sbjct: 278 GINDENGKPDVVSYTTVLHGLGVAGQLEKARKVFDEMSKEGCPPSTATYNALIQAICKKG 337

Query: 496 CVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFN 317
            V+DA+ +FD++  KGY PN +TY +LIRGLCHA +++ AM    RMK + CE NVQ  N
Sbjct: 338 NVEDAVAVFDDMVGKGYVPNVVTYTVLIRGLCHAKKIDRAMKLLERMKSEGCEHNVQAHN 397

Query: 316 LLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVME 137
           +LIR+               RM +   CLPN DTYN+IISAMF R+R+EDM VA +MV++
Sbjct: 398 VLIRYSFEEGEIEKALDLFERMSKGMECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVD 457

Query: 136 MVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
           MV+RG+LPR+FMFNRVLNGL++TGNQE ++ LLR+QEK+  L R+
Sbjct: 458 MVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEKYARLRRE 502



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
 Frame = -3

Query: 547 PSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDF 368
           P   T+N L    C       A+ +  ++   G  P   TYN++++G   +G++  A DF
Sbjct: 211 PDAVTFNILADGWCSVKDTSRALDILLQMVESGIAPTKATYNIILKGFFRSGQLRHAWDF 270

Query: 367 FRRMKL-----DNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVI 203
           F +MK      +N +P+V ++  ++                  M  KE C P+  TYN +
Sbjct: 271 FLQMKKRGINDENGKPDVVSYTTVLHGLGVAGQLEKARKVFDEM-SKEGCPPSTATYNAL 329

Query: 202 ISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
           I A+  +   ED   A  +  +MV +G++P    +  ++ GL      + A  LL   + 
Sbjct: 330 IQAICKKGNVED---AVAVFDDMVGKGYVPNVVTYTVLIRGLCHAKKIDRAMKLLERMKS 386

Query: 22  HKC 14
             C
Sbjct: 387 EGC 389


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  261 bits (668), Expect = 1e-67
 Identities = 125/213 (58%), Positives = 165/213 (77%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DV++YTT++HG G+AG +++ARKVFD M+ +G LPSVATYNA IQV C K  V +A
Sbjct: 270 DCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNA 329

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           I++F+E+  KGY PN+ITYNL+IRGLCH GEM  AM+F  RM+ D CEPNVQT+NL+IR+
Sbjct: 330 IVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMRDDGCEPNVQTYNLVIRY 389

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M   + CLPNLDTYN++ISAMF R++S+D+LVAG +++EMV+RG
Sbjct: 390 FCDEGEIDKALDLFQKMTSGD-CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRG 448

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
            +PRKF FNRVLNGLL+TGNQ FAK +LRLQ +
Sbjct: 449 FVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSR 481



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
 Frame = -3

Query: 652 PDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILL 473
           P   ++  +      AG   +A KVF  M   GC   + ++N ++ V C    V+ A  L
Sbjct: 134 PTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNL 193

Query: 472 FDELTRKGYTPNTITYNLLIRGLC-----------------------------------H 398
           F     K +  + ++YN+++ G C                                    
Sbjct: 194 FKVFKGK-FRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFR 252

Query: 397 AGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLD 218
           AG++NEA DFF  MK  +CE +V T+  +I  +               M  K+  LP++ 
Sbjct: 253 AGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTM-VKKGVLPSVA 311

Query: 217 TYNVIISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFA 50
           TYN  I  +  +   ++ +V   +  EMV +G++P    +N V+ GL   G  E A
Sbjct: 312 TYNAFIQVLCKKDNVDNAIV---IFEEMVVKGYVPNSITYNLVIRGLCHRGEMERA 364


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  261 bits (668), Expect = 1e-67
 Identities = 129/220 (58%), Positives = 167/220 (75%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           E   DVV+YTTMVHG G+ G +++ARKVF+EM+ EG LPS ATYNA+IQV C K  V++A
Sbjct: 282 EVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENA 341

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           +L+F+E+ +KGY PN  TYN++IRGL HAG M++AM+F  RMK D CEPNVQT+N+ IR+
Sbjct: 342 VLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRY 401

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M   +  LPNLDTYNV+ISAMF R++SED++VAGK+++EMV+RG
Sbjct: 402 FCDAGDVEKGLSMFEKM--GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRG 459

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            +PRKF FNRVLNGLL+TGNQ FAK +LRLQ K   L RQ
Sbjct: 460 FIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLPRQ 499


>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  261 bits (667), Expect = 1e-67
 Identities = 126/213 (59%), Positives = 165/213 (77%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+AG ++KA+K+F+EM+  G LPSVATYNALIQV C K  V++A
Sbjct: 265 KCDIDVVTYTTIVHGFGVAGEVEKAQKLFNEMVGAGILPSVATYNALIQVMCKKDSVENA 324

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           IL+F+E+ RKGY PN  TYN +IRGLCH G+M+ AM++  +M  D CEPNVQT+N++IR+
Sbjct: 325 ILIFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRY 384

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              RM   + CLPNLDTYN++ISAMF R++S+D+LVAGK++ EMV+RG
Sbjct: 385 YCDEGEIEKSLRVFERMSTGD-CLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRG 443

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
            LPRKF FNRVLNGLL+TGNQ+FAK +LRL  K
Sbjct: 444 FLPRKFTFNRVLNGLLLTGNQDFAKEILRLVSK 476



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 35/233 (15%)
 Frame = -3

Query: 607 AGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTIT 428
           AG   KA  VF  M   GC   + ++NA + V C     + A+ LF ++ R  +  +TI+
Sbjct: 144 AGKADKAVNVFLSMHKHGCPQDLNSFNAFLDVLCKSKRAEMALKLF-KMFRSRFKADTIS 202

Query: 427 YNLLIRGLC-----------------------------------HAGEMNEAMDFFRRMK 353
           YN L  G C                                    AG++ EA +FF +MK
Sbjct: 203 YNTLANGFCLVKRTPKAQEILKEMVERGLNPTITTYNIMLNGFFRAGQIKEAWEFFLQMK 262

Query: 352 LDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRS 173
              C+ +V T+  ++  +               M      LP++ TYN +I  M  +   
Sbjct: 263 KRKCDIDVVTYTTIVHGFGVAGEVEKAQKLFNEM-VGAGILPSVATYNALIQVMCKKDSV 321

Query: 172 EDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
           E+ ++   +  EM+ +G+LP    +N ++ GL   G  + A   +    +  C
Sbjct: 322 ENAIL---IFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGC 371


>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 491

 Score =  260 bits (664), Expect = 3e-67
 Identities = 125/220 (56%), Positives = 170/220 (77%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHGLG+AG +++ARKVFDEM+ EG LPSVATYNALIQV C K CV++A
Sbjct: 270 KCEIDVVTYTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQVLCKKDCVENA 329

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           IL+F+E+ RKGY PN+ TYN++IRGLCH  +M+ A++F  +M+ D C PNVQT+N++IR+
Sbjct: 330 ILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPNVQTYNIVIRY 389

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M     CLPNLDTYN++I AMF R++ +D++VAGK+++EMV+RG
Sbjct: 390 FCDAGEIEKGLELFQKM-SCGDCLPNLDTYNILIGAMFVRKKPDDLVVAGKLLIEMVDRG 448

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            +PR+  FNRVL+GLL+TGNQ FAKG+LRLQ +   L RQ
Sbjct: 449 FMPRRLTFNRVLDGLLLTGNQGFAKGILRLQSRCGRLPRQ 488



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 46/196 (23%), Positives = 84/196 (42%)
 Frame = -3

Query: 664 LECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKD 485
           L   P   ++  +      AG   KA K+F  M   GC   + ++N ++ V C    V+ 
Sbjct: 130 LRLHPTPKTFAIIAERYVAAGKPDKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEK 189

Query: 484 AILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIR 305
           A   F  L  K +  + I+YN++  G C     N A++  + M      PN+ T+N++++
Sbjct: 190 ACNFFKVLRGK-FKADVISYNIIANGWCLIKRTNMALETLKEMVEKGLTPNLTTYNIMLK 248

Query: 304 HWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVER 125
            +               M +K  C  ++ TY  ++  +     + ++  A K+  EMV  
Sbjct: 249 GYFRAGQIEEGWKFFLEM-KKRKCEIDVVTYTTVVHGL---GVAGEIKRARKVFDEMVRE 304

Query: 124 GHLPRKFMFNRVLNGL 77
           G LP    +N ++  L
Sbjct: 305 GVLPSVATYNALIQVL 320


>gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
          Length = 403

 Score =  259 bits (662), Expect = 5e-67
 Identities = 128/220 (58%), Positives = 165/220 (75%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+ G ++KARKVFDEM+ EG LPSVATYNALIQV C K  V++A
Sbjct: 182 KCEIDVVTYTTLVHGFGVVGEIKKARKVFDEMVGEGVLPSVATYNALIQVLCKKDSVENA 241

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           +L+F+E+  KGY PN  TY++LIRGLCHAG M  AM++  RMK D CEPNVQ +N++IR+
Sbjct: 242 VLVFEEMMSKGYVPNVTTYSVLIRGLCHAGNMERAMEYMERMKDDKCEPNVQIYNVVIRY 301

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M     CLPNLDTYNV+ISAMF R++ ED+LVAGK+++EMV RG
Sbjct: 302 FCDAGEIEKGLSVFEKM-GGGICLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVNRG 360

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            LPR+F FNR+L+GLL+TGNQ FA+ +LRLQ +   L RQ
Sbjct: 361 FLPRRFTFNRILDGLLLTGNQAFAQEILRLQSRCGRLPRQ 400



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
 Frame = -3

Query: 667 DLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVK 488
           D +C P+V  Y  ++     AG ++K   VF++M    CLP++ TYN LI    ++   +
Sbjct: 285 DDKCEPNVQIYNVVIRYFCDAGEIEKGLSVFEKMGGGICLPNLDTYNVLISAMFVRKKPE 344

Query: 487 DAIL---LFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFR 362
           D ++   L  E+  +G+ P   T+N ++ GL   G    A +  R
Sbjct: 345 DLLVAGKLLIEMVNRGFLPRRFTFNRILDGLLLTGNQAFAQEILR 389


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  259 bits (661), Expect = 7e-67
 Identities = 127/220 (57%), Positives = 167/220 (75%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+ G +++AR VFD M++ G LPSVATYNA+IQV C K  V++A
Sbjct: 272 KCEIDVVTYTTIVHGFGIVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENA 331

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           IL+F+E+ RKGY PN+ TYN++IRGLCHAGEM  A++F  RMK D CEPNVQT+N+LIR+
Sbjct: 332 ILVFEEMVRKGYMPNSTTYNVVIRGLCHAGEMERALEFVGRMKDDECEPNVQTYNILIRY 391

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M     CLPNLDTYN++IS+MF R++S+D+LVAGK+++EMV+RG
Sbjct: 392 FCDAGEIERGLELFEKM-GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRG 450

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            +PRKF FNRVLNGLL+ GNQ  AK +LRLQ +   L RQ
Sbjct: 451 FMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQ 490



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
 Frame = -3

Query: 607 AGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTIT 428
           AG   +A K+F  M   GC  S+ ++N ++ + C +  V+ A  LF ++ R  +  + I+
Sbjct: 151 AGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVIS 209

Query: 427 YNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMH 248
           YN++  G C     N+A++  + M      PN+ T+N++++ +               M 
Sbjct: 210 YNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMK 269

Query: 247 EKE----------------------------------SCLPNLDTYNVIISAMFSRRRSE 170
           +++                                    LP++ TYN +I  +  +   E
Sbjct: 270 KRKCEIDVVTYTTIVHGFGIVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVE 329

Query: 169 DMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
           + ++   +  EMV +G++P    +N V+ GL   G  E A   +   +  +C
Sbjct: 330 NAIL---VFEEMVRKGYMPNSTTYNVVIRGLCHAGEMERALEFVGRMKDDEC 378



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = -3

Query: 667 DLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVK 488
           D EC P+V +Y  ++     AG +++  ++F++M S  CLP++ TYN LI    ++    
Sbjct: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434

Query: 487 DAIL---LFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFR 362
           D ++   L  E+  +G+ P   T+N ++ GL   G    A +  R
Sbjct: 435 DLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILR 479


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  258 bits (660), Expect = 9e-67
 Identities = 124/213 (58%), Positives = 163/213 (76%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+AG ++KA+K+F+EM+  G LPS+ATYNALIQV C K   ++A
Sbjct: 271 KCDIDVVTYTTLVHGFGVAGEVEKAQKLFNEMVGAGILPSIATYNALIQVMCKKDSTENA 330

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           IL+F+E+ RKGY PN  TYN +IRGLCH G+M+ AM++  +M  D CEPNVQT+N++IR+
Sbjct: 331 ILVFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRY 390

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              RM     CLPNLDTYN++ISAMF R++S+D+LVAGK++ EMV+RG
Sbjct: 391 YCDEGEIEKSLRVFERM-STGHCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRG 449

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
            LPRKF FNRVLNGLL+TGNQ+FAK +LRL  K
Sbjct: 450 FLPRKFTFNRVLNGLLLTGNQDFAKEILRLVSK 482



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 35/233 (15%)
 Frame = -3

Query: 607 AGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTIT 428
           AG   KA  VF  M   GC   ++++NA + V C     + A+ LF ++ R  +  +TI+
Sbjct: 150 AGKADKAVNVFLSMHKHGCPQDLSSFNAFLDVLCKSKRAEMALKLF-KMFRSRFKADTIS 208

Query: 427 YNLLIRGLC-----------------------------------HAGEMNEAMDFFRRMK 353
           YN L  G C                                    AG++ EA +FF +MK
Sbjct: 209 YNTLANGFCLVKRTPKAQEILKEMVERGLNPTITTYNIMLNGFFRAGQIKEAWEFFLQMK 268

Query: 352 LDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRS 173
              C+ +V T+  L+  +               M      LP++ TYN +I  M  +  +
Sbjct: 269 KRKCDIDVVTYTTLVHGFGVAGEVEKAQKLFNEM-VGAGILPSIATYNALIQVMCKKDST 327

Query: 172 EDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
           E+ ++   +  EM+ +G+LP    +N ++ GL   G  + A   +    +  C
Sbjct: 328 ENAIL---VFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGC 377


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  258 bits (659), Expect = 1e-66
 Identities = 125/220 (56%), Positives = 166/220 (75%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+ G ++K RK+FD M+ EG LPSVATYNALIQV C K  V++A
Sbjct: 268 KCEIDVVTYTTLVHGFGVLGEIKKVRKIFDGMVEEGVLPSVATYNALIQVLCKKDSVENA 327

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           +++F+E+  KGY PN  TYN+L+RGLCHAG M+  M+   RMK D+CEPNVQT+N++IR+
Sbjct: 328 VVVFEEMVSKGYVPNVTTYNVLVRGLCHAGNMDSGMELMERMKDDDCEPNVQTYNVVIRY 387

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M + E CLPNLDTYNV+ISAMF R++ ED+LVAGK+++EMV+RG
Sbjct: 388 FCDDGQIDKALDVFEKMGKGE-CLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVDRG 446

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            LPRK+ FN+VL+GLL+TGNQ FAK +LR Q +   L RQ
Sbjct: 447 FLPRKYTFNKVLDGLLLTGNQGFAKEILRSQSRCGRLPRQ 486


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  258 bits (659), Expect = 1e-66
 Identities = 124/213 (58%), Positives = 163/213 (76%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+AG +++AR VFDEMI EG LPSVATYNA+IQV C K  V++A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           +++F+E+ R+GY PN  TYN+LIRGL HAGE +   +  +RM+ + CEPN QT+N++IR+
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M   + CLPNLDTYN++IS MF R+RSEDM+VAGK+++EMVERG
Sbjct: 380 YSECSEVEKALGLFEKMGSGD-CLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
            +PRKF FNRVLNGLL+TGNQ FAK +LRLQ K
Sbjct: 439 FIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSK 471



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
 Frame = -3

Query: 658 CRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAI 479
           C  D+ S+ T++  L  +  ++KA ++F  +     + +V TYN ++   C+      A+
Sbjct: 157 CFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKAL 215

Query: 478 LLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRHW 299
            +  E+  +G  PN  TYN +++G   AG++  A +FF  MK  +CE +V T+  ++  +
Sbjct: 216 EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275

Query: 298 XXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERGH 119
                          M  +E  LP++ TYN +I  +  +   E+ +V   M  EMV RG+
Sbjct: 276 GVAGEIKRARNVFDEM-IREGVLPSVATYNAMIQVLCKKDNVENAVV---MFEEMVRRGY 331

Query: 118 LPRKFMFNRVLNGLLVTGNQEFAKG--LLRLQEKHKC 14
            P    +N ++ GL   G  EF++G  L++  E   C
Sbjct: 332 EPNVTTYNVLIRGLFHAG--EFSRGEELMQRMENEGC 366


>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  258 bits (658), Expect = 2e-66
 Identities = 125/213 (58%), Positives = 166/213 (77%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+AG ++KA++VF+EMI EG LPSVATYNA IQV C K  V++A
Sbjct: 229 KCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENA 288

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           I +F+E+ RKGY PN+ TYN++IRGLCH G M +AM+F  RMK D CEPNVQ +N++IR+
Sbjct: 289 ISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRY 348

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M + + CLPNLDTYN++ISAMF R++S+ +L AGK+++EMVERG
Sbjct: 349 FCDAEEIEKGLNVFEKMGDAD-CLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERG 407

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEK 23
            LPRKF FNRVL+GLL+TGNQ+FAK +LRLQ +
Sbjct: 408 FLPRKFTFNRVLDGLLLTGNQDFAKEILRLQSR 440



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 49/198 (24%), Positives = 88/198 (44%)
 Frame = -3

Query: 607 AGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTIT 428
           AG   +A K+F  M   GC+  + ++N ++ V C    V+ A         K +      
Sbjct: 149 AGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMA-------DNKLFKVFRGR 201

Query: 427 YNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMH 248
           + +L++G   AG++ EA +FF +MK   CE +V T+  ++  +               M 
Sbjct: 202 FRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEM- 260

Query: 247 EKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVT 68
             E  LP++ TYN  I  +  +   E+ +    +  EM+ +G++P    +N V+ GL   
Sbjct: 261 IGEGVLPSVATYNAFIQVLCKKDNVENAI---SVFEEMLRKGYMPNSTTYNVVIRGLCHV 317

Query: 67  GNQEFAKGLLRLQEKHKC 14
           G  E A   +   +  +C
Sbjct: 318 GRMEKAMEFMARMKDDEC 335


>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  254 bits (649), Expect = 2e-65
 Identities = 125/220 (56%), Positives = 165/220 (75%)
 Frame = -3

Query: 661 ECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDA 482
           +C  DVV+YTT+VHG G+ G +++AR VFD M++ G LPSVATYNA+IQV C K  V++A
Sbjct: 272 KCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENA 331

Query: 481 ILLFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRH 302
           IL+F+E+  KGY PN+ TYN++IRGLCH GEM  A++F  RMK D CEPNVQT+N+LIR+
Sbjct: 332 ILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRY 391

Query: 301 WXXXXXXXXXXXXXGRMHEKESCLPNLDTYNVIISAMFSRRRSEDMLVAGKMVMEMVERG 122
           +              +M     CLPNLDTYN++IS+MF R++S+D+LVAGK+++EMV+RG
Sbjct: 392 FCDAGEIERGLELFEKM-GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRG 450

Query: 121 HLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKCLGRQ 2
            +PRKF FNRVLNGLL+ GNQ  AK +LRLQ +   L RQ
Sbjct: 451 FMPRKFTFNRVLNGLLLMGNQGLAKEILRLQSRCGRLPRQ 490



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
 Frame = -3

Query: 607 AGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVKDAILLFDELTRKGYTPNTIT 428
           AG   +A K+F  M   GC  S+ ++N ++ + C +  V+ A  LF ++ R  +  + I+
Sbjct: 151 AGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVIS 209

Query: 427 YNLLIRGLCHAGEMNEAMDFFRRMKLDNCEPNVQTFNLLIRHWXXXXXXXXXXXXXGRMH 248
           YN++  G C     N+A++  + M      PN+ T+N++++ +               M 
Sbjct: 210 YNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMK 269

Query: 247 EKE----------------------------------SCLPNLDTYNVIISAMFSRRRSE 170
           +++                                    LP++ TYN +I  +  +   E
Sbjct: 270 KRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVE 329

Query: 169 DMLVAGKMVMEMVERGHLPRKFMFNRVLNGLLVTGNQEFAKGLLRLQEKHKC 14
           + ++   +  EMV +G++P    +N V+ GL  TG  E A   +   +  +C
Sbjct: 330 NAIL---VFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDEC 378



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = -3

Query: 667 DLECRPDVVSYTTMVHGLGLAGLLQKARKVFDEMISEGCLPSVATYNALIQVNCIKGCVK 488
           D EC P+V +Y  ++     AG +++  ++F++M S  CLP++ TYN LI    ++    
Sbjct: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434

Query: 487 DAIL---LFDELTRKGYTPNTITYNLLIRGLCHAGEMNEAMDFFR 362
           D ++   L  E+  +G+ P   T+N ++ GL   G    A +  R
Sbjct: 435 DLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLMGNQGLAKEILR 479