BLASTX nr result

ID: Zingiber25_contig00033466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033466
         (501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006646806.1| PREDICTED: eukaryotic translation initiation...    62   1e-07
ref|XP_004952075.1| PREDICTED: eukaryotic translation initiation...    59   9e-07
ref|XP_002453220.1| hypothetical protein SORBIDRAFT_04g001850 [S...    57   3e-06
gb|ABR16083.1| unknown [Picea sitchensis]                              56   6e-06

>ref|XP_006646806.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-A-like [Oryza brachyantha]
          Length = 231

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +3

Query: 381 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWE 500
           M DW+ EDF+PAAPG      K++WDDED+E+E++KESWE
Sbjct: 1   MEDWDSEDFQPAAPGAKAETLKSKWDDEDVEEEDVKESWE 40


>ref|XP_004952075.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-A-like [Setaria italica]
          Length = 231

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 22/40 (55%), Positives = 32/40 (80%)
 Frame = +3

Query: 381 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWE 500
           M DW+ EDF+PAAP ++    KNQW DED+E++++K+SWE
Sbjct: 1   MEDWDAEDFQPAAPVVIAEPLKNQWADEDVEEDDVKDSWE 40


>ref|XP_002453220.1| hypothetical protein SORBIDRAFT_04g001850 [Sorghum bicolor]
           gi|241933051|gb|EES06196.1| hypothetical protein
           SORBIDRAFT_04g001850 [Sorghum bicolor]
          Length = 231

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +3

Query: 381 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWE 500
           M DW+ EDF+P AP +     KNQW DED+E++++KESWE
Sbjct: 1   MEDWDSEDFQPVAPVVKAEPLKNQWADEDVEEDDVKESWE 40


>gb|ABR16083.1| unknown [Picea sitchensis]
          Length = 223

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/38 (57%), Positives = 26/38 (68%)
 Frame = +3

Query: 387 DWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWE 500
           DWE EDF P  P +   +PK  WDDED  DE++KESWE
Sbjct: 4   DWEAEDFVPIPPVIAKEKPKGTWDDEDASDEDVKESWE 41


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