BLASTX nr result
ID: Zingiber25_contig00033274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00033274
(538 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays] 78 1e-12
ref|NP_001167848.1| uncharacterized protein LOC100381550 [Zea ma... 78 1e-12
ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [S... 77 3e-12
gb|EXB74786.1| Dicer-like protein 4 [Morus notabilis] 75 7e-12
gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japo... 74 2e-11
gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indi... 74 2e-11
dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica G... 74 2e-11
dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group] 74 2e-11
sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homo... 74 2e-11
ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group] g... 74 2e-11
emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group] gi... 74 2e-11
gb|EEC84575.1| hypothetical protein OsI_31370 [Oryza sativa Indi... 74 3e-11
dbj|BAD28919.1| hypothetical protein [Oryza sativa Japonica Grou... 73 4e-11
dbj|BAH01170.1| unnamed protein product [Oryza sativa Japonica G... 73 4e-11
ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-... 73 5e-11
ref|XP_004976180.1| PREDICTED: endoribonuclease Dicer homolog 4-... 73 5e-11
ref|XP_004976179.1| PREDICTED: endoribonuclease Dicer homolog 4-... 73 5e-11
ref|NP_001131481.1| Double-stranded RNA binding motif protein fa... 73 5e-11
ref|XP_006661229.1| PREDICTED: endoribonuclease Dicer homolog 4-... 72 6e-11
ref|XP_004956823.1| PREDICTED: ribonuclease 3-like protein 1-lik... 71 1e-10
>gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays]
Length = 306
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC +EGP ++F+CK+++E+ ++++LEC+S
Sbjct: 213 GDMVRKTARSFLYELCAANYWKPPEFELCNDEGPSHLRKFTCKVLIEITGTSVSLLECYS 272
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW+L LG+
Sbjct: 273 DPKLQKRAAQEHAAEGALWYLKHLGY 298
>ref|NP_001167848.1| uncharacterized protein LOC100381550 [Zea mays]
gi|223944409|gb|ACN26288.1| unknown [Zea mays]
Length = 264
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC +EGP ++F+CK+++E+ ++++LEC+S
Sbjct: 171 GDMVRKTARSFLYELCAANYWKPPEFELCNDEGPSHLRKFTCKVLIEITGTSVSLLECYS 230
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW+L LG+
Sbjct: 231 DPKLQKRAAQEHAAEGALWYLKHLGY 256
>ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein
SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILCE-EGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC+ EGP ++F+CK+++++ + T+LEC+S
Sbjct: 605 GDMVRKTARSFLYELCAANYWKPPDFELCKGEGPSHLRKFTCKVLIQITGTSATLLECYS 664
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW+L +LG+
Sbjct: 665 DPKLQKKAAHEHAAEGALWYLKQLGY 690
>gb|EXB74786.1| Dicer-like protein 4 [Morus notabilis]
Length = 1682
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +2
Query: 17 GTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSESQP 196
GT TA+SRL +C AN WK P F EGP + F+CK+++E++ ILECFS + P
Sbjct: 1599 GTATARSRLYEVCGANFWKPPLFECWNEGPGHLQLFTCKVLVEIEEAQDMILECFSSAHP 1658
Query: 197 HXXXXXXXXXXGALWFLNRLGH 262
GALWFL + G+
Sbjct: 1659 KKKAAAEHAAEGALWFLKQQGY 1680
>gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 1538 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1597
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1598 DGKLQKKAAQEHAAQGALWCLKQLGH 1623
>gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 1482 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1541
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1542 DGKLQKKAAQEHAAQGALWCLKQLGH 1567
>dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 964 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1023
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1024 DGKLQKKAAQEHAAQGALWCLKQLGH 1049
>dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 1537 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1596
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1597 DGKLQKKAAQEHAAQGALWCLKQLGH 1622
>sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza
sativa Japonica Group]
Length = 1657
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 1563 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1622
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1623 DGKLQKKAAQEHAAQGALWCLKQLGH 1648
>ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza
sativa Japonica Group]
Length = 1090
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 996 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1055
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1056 DGKLQKKAAQEHAAQGALWCLKQLGH 1081
>emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2
[Oryza sativa Indica Group]
Length = 1604
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP ++F+ K+++E+ + T+LEC S
Sbjct: 1510 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHS 1569
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LGH
Sbjct: 1570 DGKLQKKAAQEHAAQGALWCLKQLGH 1595
>gb|EEC84575.1| hypothetical protein OsI_31370 [Oryza sativa Indica Group]
Length = 180
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/85 (41%), Positives = 45/85 (52%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSE 187
G A+ RL IC+A WK PS+ E+GP K F+CK+ + VDT T TI+EC SE
Sbjct: 94 GTTDNEPARLRLHKICSATHWKEPSYDFEEQGPSHLKLFTCKVTIHVDTFTTTIVECISE 153
Query: 188 SQPHXXXXXXXXXXGALWFLNRLGH 262
+ GALW+L GH
Sbjct: 154 PKRSKKAAQEHAAQGALWYLKIFGH 178
>dbj|BAD28919.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50253009|dbj|BAD29259.1| hypothetical protein [Oryza
sativa Japonica Group] gi|125605702|gb|EAZ44738.1|
hypothetical protein OsJ_29369 [Oryza sativa Japonica
Group]
Length = 122
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/85 (41%), Positives = 44/85 (51%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSE 187
G A+ RL IC+A WK PS+ E+GP K F+CK+ + VDT T TI+EC SE
Sbjct: 36 GTTDNEPARLRLHKICSATHWKEPSYDFEEQGPSHLKLFTCKVTIHVDTFTTTIVECISE 95
Query: 188 SQPHXXXXXXXXXXGALWFLNRLGH 262
GALW+L GH
Sbjct: 96 PNRSKKAAQEHAAQGALWYLKIFGH 120
>dbj|BAH01170.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 180
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/85 (41%), Positives = 44/85 (51%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSE 187
G A+ RL IC+A WK PS+ E+GP K F+CK+ + VDT T TI+EC SE
Sbjct: 94 GTTDNEPARLRLHKICSATHWKEPSYDFEEQGPSHLKLFTCKVTIHVDTFTTTIVECISE 153
Query: 188 SQPHXXXXXXXXXXGALWFLNRLGH 262
GALW+L GH
Sbjct: 154 PNRSKKAAQEHAAQGALWYLKIFGH 178
>ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Oryza brachyantha]
Length = 1633
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC EEGP +F+ K+++E+ + T+LEC S
Sbjct: 1540 GDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLPKFTYKVVVEIKGTSATLLECHS 1599
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+++ GA+W L +LGH
Sbjct: 1600 DAKHQKKAAQEHAAQGAVWCLKQLGH 1625
>ref|XP_004976180.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X2 [Setaria
italica]
Length = 1327
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC +EGP ++F+CK+++++ + T+LEC+S
Sbjct: 1234 GDMVHKTARSFLYELCAANYWKPPEFELCKDEGPSHLRKFTCKVLVQIMGPSATLLECYS 1293
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LG+
Sbjct: 1294 DPKLQKKAAQEHAAQGALWCLKQLGY 1319
>ref|XP_004976179.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X1 [Setaria
italica]
Length = 1632
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 GDQGTRTAKSRLLMICAANSWKHPSFILC-EEGPEQQKRFSCKIILEVDTITITILECFS 184
GD +TA+S L +CAAN WK P F LC +EGP ++F+CK+++++ + T+LEC+S
Sbjct: 1539 GDMVHKTARSFLYELCAANYWKPPEFELCKDEGPSHLRKFTCKVLVQIMGPSATLLECYS 1598
Query: 185 ESQPHXXXXXXXXXXGALWFLNRLGH 262
+ + GALW L +LG+
Sbjct: 1599 DPKLQKKAAQEHAAQGALWCLKQLGY 1624
>ref|NP_001131481.1| Double-stranded RNA binding motif protein family [Zea mays]
gi|194691644|gb|ACF79906.1| unknown [Zea mays]
gi|195623306|gb|ACG33483.1| double-stranded RNA binding
motif family protein [Zea mays]
gi|414885437|tpg|DAA61451.1| TPA: Double-stranded RNA
binding motif protein family [Zea mays]
Length = 184
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/83 (40%), Positives = 47/83 (56%)
Frame = +2
Query: 14 QGTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSESQ 193
+G +A SRL IC A WK PSF E+GP + F+CK+ + +D + TI+ECFS+ +
Sbjct: 85 KGNTSASSRLPKICKAAGWKEPSFDFEEQGPPHNRIFTCKVTVHLDGLVNTIMECFSDPK 144
Query: 194 PHXXXXXXXXXXGALWFLNRLGH 262
P GALW L R G+
Sbjct: 145 PKKKAARENAAQGALWCLERSGY 167
>ref|XP_006661229.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Oryza
brachyantha]
Length = 172
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = +2
Query: 50 ICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSESQPHXXXXXXXXXX 229
IC+A WK PS+ E+GP K F+CK+ + VDT+T TILEC SE + +
Sbjct: 100 ICSATRWKEPSYEFEEQGPAHDKLFTCKVTIHVDTVTNTILECISEPKRYKKAAQEHAAQ 159
Query: 230 GALWFLNRLGH 262
GALW+L GH
Sbjct: 160 GALWYLKIFGH 170
>ref|XP_004956823.1| PREDICTED: ribonuclease 3-like protein 1-like [Setaria italica]
Length = 184
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +2
Query: 17 GTRTAKSRLLMICAANSWKHPSFILCEEGPEQQKRFSCKIILEVDTITITILECFSESQP 196
G A+ RL ICAA WK PSF E+GP K F CK+ + ++ + T++ECFS+ +P
Sbjct: 101 GNEPARLRLPKICAAIGWKEPSFDFEEQGPPHNKLFICKVTVHLEGLVNTVMECFSDPKP 160
Query: 197 HXXXXXXXXXXGALWFLNRLGH 262
ALW L R GH
Sbjct: 161 KKKAAQDHAAQAALWCLERFGH 182