BLASTX nr result
ID: Zingiber25_contig00033249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00033249
(283 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [S... 72 1e-10
ref|XP_006664055.1| PREDICTED: histone deacetylase 6-like [Oryza... 70 4e-10
ref|NP_001176971.1| Os12g0508266 [Oryza sativa Japonica Group] g... 70 4e-10
gb|EEC69353.1| hypothetical protein OsI_38470 [Oryza sativa Indi... 70 4e-10
ref|XP_004962915.1| PREDICTED: histone deacetylase 6-like isofor... 69 5e-10
ref|XP_004962914.1| PREDICTED: histone deacetylase 6-like isofor... 69 5e-10
ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brach... 69 5e-10
ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Popu... 66 5e-10
tpg|DAA55376.1| TPA: hypothetical protein ZEAMMB73_509060, parti... 68 1e-09
ref|NP_001141476.1| histone deacetylase 6 [Zea mays] gi|19470472... 68 1e-09
ref|XP_004248767.1| PREDICTED: histone deacetylase 6-like [Solan... 67 3e-09
ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ... 66 3e-09
ref|XP_006353977.1| PREDICTED: histone deacetylase 6-like [Solan... 64 7e-09
ref|XP_004289794.1| PREDICTED: histone deacetylase 6-like [Fraga... 64 7e-09
gb|EPS71078.1| hypothetical protein M569_03681, partial [Genlise... 62 1e-08
gb|EMJ03076.1| hypothetical protein PRUPE_ppa013008mg [Prunus pe... 63 2e-08
gb|ESW29210.1| hypothetical protein PHAVU_002G052300g [Phaseolus... 64 2e-08
gb|EOX98443.1| Regulator of Vps4 activity in the MVB pathway pro... 64 2e-08
dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana] 62 3e-08
ref|XP_006486934.1| PREDICTED: histone deacetylase 6-like [Citru... 63 4e-08
>ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [Sorghum bicolor]
gi|241943941|gb|EES17086.1| hypothetical protein
SORBIDRAFT_08g016307 [Sorghum bicolor]
Length = 148
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ HH
Sbjct: 43 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHH 78
>ref|XP_006664055.1| PREDICTED: histone deacetylase 6-like [Oryza brachyantha]
Length = 180
Score = 69.7 bits (169), Expect = 4e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ H+
Sbjct: 74 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHY 109
>ref|NP_001176971.1| Os12g0508266 [Oryza sativa Japonica Group]
gi|222617152|gb|EEE53284.1| hypothetical protein
OsJ_36238 [Oryza sativa Japonica Group]
gi|255670335|dbj|BAH95699.1| Os12g0508266 [Oryza sativa
Japonica Group]
Length = 187
Score = 69.7 bits (169), Expect = 4e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ H+
Sbjct: 81 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHY 116
>gb|EEC69353.1| hypothetical protein OsI_38470 [Oryza sativa Indica Group]
Length = 187
Score = 69.7 bits (169), Expect = 4e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ H+
Sbjct: 81 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHY 116
>ref|XP_004962915.1| PREDICTED: histone deacetylase 6-like isoform X2 [Setaria italica]
Length = 123
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ H+
Sbjct: 76 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHY 111
>ref|XP_004962914.1| PREDICTED: histone deacetylase 6-like isoform X1 [Setaria italica]
Length = 182
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRCHHPAENWLCL CKDV CSRFINKHM+ H+
Sbjct: 76 DSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHY 111
>ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brachypodium distachyon]
Length = 188
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -1
Query: 115 SGDQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
S D SRCHHP+ENWLCL CKDV CSRFINKHM+ H+
Sbjct: 80 SPDSQCSRCHHPSENWLCLICKDVLCSRFINKHMLCHY 117
>ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Populus trichocarpa]
gi|118483848|gb|ABK93815.1| unknown [Populus
trichocarpa] gi|222850311|gb|EEE87858.1| hypothetical
protein POPTR_0009s09330g [Populus trichocarpa]
Length = 160
Score = 65.9 bits (159), Expect(2) = 5e-10
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNH 5
D +RC HP+ENWLCLSCKDV CSRF+NKHM+ H
Sbjct: 55 DTPCNRCQHPSENWLCLSCKDVLCSRFVNKHMLQH 89
Score = 23.5 bits (49), Expect(2) = 5e-10
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
RT+CDHL+ L L+ IP
Sbjct: 35 RTSCDHLASLSSDLAHIP 52
>tpg|DAA55376.1| TPA: hypothetical protein ZEAMMB73_509060, partial [Zea mays]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1
Query: 115 SGDQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
S D SRC+HPAENWLC CKDV CSRFINKHM+ HH
Sbjct: 78 SPDSPCSRCNHPAENWLCFICKDVLCSRFINKHMLCHH 115
>ref|NP_001141476.1| histone deacetylase 6 [Zea mays] gi|194704728|gb|ACF86448.1|
unknown [Zea mays] gi|195621352|gb|ACG32506.1| histone
deacetylase 6 [Zea mays] gi|223947619|gb|ACN27893.1|
unknown [Zea mays] gi|414878244|tpg|DAA55375.1| TPA:
histone deacetylase 6 [Zea mays]
Length = 185
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1
Query: 115 SGDQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
S D SRC+HPAENWLC CKDV CSRFINKHM+ HH
Sbjct: 78 SPDSPCSRCNHPAENWLCFICKDVLCSRFINKHMLCHH 115
>ref|XP_004248767.1| PREDICTED: histone deacetylase 6-like [Solanum lycopersicum]
Length = 194
Score = 66.6 bits (161), Expect = 3e-09
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D +RC HPAENWLCL CK+V CSRF+NKHM+ HH
Sbjct: 87 DTPCNRCQHPAENWLCLCCKEVLCSRFVNKHMLEHH 122
>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
putative [Ricinus communis]
Length = 159
Score = 66.2 bits (160), Expect(2) = 3e-09
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -1
Query: 121 HVSG-DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
H+S D RC HP+ENWLCLSCKDV CSRF+NKHM+ H+
Sbjct: 54 HISTPDTPCHRCQHPSENWLCLSCKDVLCSRFVNKHMLQHY 94
Score = 20.4 bits (41), Expect(2) = 3e-09
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS 237
+T+CDHL L LS
Sbjct: 39 KTSCDHLGSLSSDLS 53
>ref|XP_006353977.1| PREDICTED: histone deacetylase 6-like [Solanum tuberosum]
Length = 216
Score = 64.3 bits (155), Expect(2) = 7e-09
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D +RC HPAENWLCL CK+V CSRF+NKHM+ H+
Sbjct: 109 DTPCNRCQHPAENWLCLCCKEVLCSRFVNKHMLEHY 144
Score = 21.2 bits (43), Expect(2) = 7e-09
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
+T CDHL+ L L+ IP
Sbjct: 89 KTHCDHLASLSSDLTHIP 106
>ref|XP_004289794.1| PREDICTED: histone deacetylase 6-like [Fragaria vesca subsp. vesca]
Length = 146
Score = 63.9 bits (154), Expect(2) = 7e-09
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D + +RC HP+ENWLCL CK+V CSRF+NKHM+ H+
Sbjct: 57 DTNCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 92
Score = 21.6 bits (44), Expect(2) = 7e-09
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
RT+CDHL L L IP
Sbjct: 37 RTSCDHLPSLSSDLVHIP 54
>gb|EPS71078.1| hypothetical protein M569_03681, partial [Genlisea aurea]
Length = 140
Score = 62.0 bits (149), Expect(2) = 1e-08
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D +RC P ENWLCLSC VFCSRF+NKHM+ HH
Sbjct: 52 DTPCARCEDPRENWLCLSCNRVFCSRFVNKHMLEHH 87
Score = 22.7 bits (47), Expect(2) = 1e-08
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
RT CDHLS L L IP
Sbjct: 32 RTYCDHLSTLSSDLIHIP 49
>gb|EMJ03076.1| hypothetical protein PRUPE_ppa013008mg [Prunus persica]
Length = 144
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNH 5
D +RC HP ENWLCL CKDV CSRF+NKHM+ H
Sbjct: 55 DTPCNRCQHPNENWLCLCCKDVLCSRFVNKHMLQH 89
Score = 21.6 bits (44), Expect(2) = 2e-08
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
RT CDHL L L+ IP
Sbjct: 35 RTFCDHLPSLSTDLAHIP 52
>gb|ESW29210.1| hypothetical protein PHAVU_002G052300g [Phaseolus vulgaris]
Length = 150
Score = 64.3 bits (155), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1
Query: 91 CHHPAENWLCLSCKDVFCSRFINKHMVNH 5
CHHP+ENWLCLSCK V CSRF+NKHM++H
Sbjct: 58 CHHPSENWLCLSCKQVLCSRFVNKHMLHH 86
>gb|EOX98443.1| Regulator of Vps4 activity in the MVB pathway protein [Theobroma
cacao]
Length = 162
Score = 64.3 bits (155), Expect = 2e-08
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1
Query: 97 SRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
+RC HP+ENWLCL CKDV CSRF+NKHM+ H+
Sbjct: 60 NRCQHPSENWLCLCCKDVLCSRFVNKHMLEHY 91
>dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana]
Length = 146
Score = 62.4 bits (150), Expect(2) = 3e-08
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D SRC +P ENWLCL CK+V CSRF+N+HM+ HH
Sbjct: 57 DTPCSRCQNPVENWLCLCCKEVLCSRFVNRHMLTHH 92
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 281 RTTCDHLSLLCYHLS*IP 228
R TCDHL+ L L +P
Sbjct: 37 RKTCDHLNTLSPDLLHLP 54
>ref|XP_006486934.1| PREDICTED: histone deacetylase 6-like [Citrus sinensis]
Length = 149
Score = 63.2 bits (152), Expect = 4e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -1
Query: 109 DQDKSRCHHPAENWLCLSCKDVFCSRFINKHMVNHH 2
D +RC HP+ENWLCL CK+V CSRF+NKHM+ H+
Sbjct: 52 DTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87