BLASTX nr result

ID: Zingiber25_contig00033193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033193
         (252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17182.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_003615774.1| NBS-LRR resistance protein [Medicago truncat...    55   1e-05

>emb|CBI17182.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = -3

Query: 247 LEEWS---ESHGVNQLFPLLQRVKIINCPELK--CMPRLPRIQELEVLWCRRRLLSCVGR 83
           LEEWS   E  GV + FP L  + I NCP L+   +PRLP + EL++  C   +L  V  
Sbjct: 664 LEEWSSGVEESGVRE-FPCLHELTIWNCPNLRRFSLPRLPLLCELDLEECDGTILRSVVD 722

Query: 82  LTSLSVLEVVDVRDMVSLPSGCIRNL 5
           L SL+ L +  + ++V LP G  +NL
Sbjct: 723 LMSLTSLHISGISNLVCLPEGMFKNL 748


>ref|XP_003615774.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517109|gb|AES98732.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 940

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -3

Query: 214  QLFPLLQRVKIINCPELKCMPRLPRIQELEVLWCRRRLLSCVGRLTSLSVLEVVDVRDMV 35
            ++FP L R+ I NCP+L  +P LP ++ELE+  C   LL  +     L+ L + +   + 
Sbjct: 793  EMFPCLSRLDIWNCPKLLGLPCLPSLKELEIWGCNNELLRSISTFRGLTQLSLYNGFGIT 852

Query: 34   SLPSGCIRNLT 2
            S P G  +NLT
Sbjct: 853  SFPEGMFKNLT 863


Top