BLASTX nr result

ID: Zingiber25_contig00033154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00033154
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578269.1| PREDICTED: UPF0481 protein At3g47200-like is...    57   5e-06

>ref|XP_003578269.1| PREDICTED: UPF0481 protein At3g47200-like isoform 1 [Brachypodium
           distachyon] gi|357158880|ref|XP_003578270.1| PREDICTED:
           UPF0481 protein At3g47200-like isoform 2 [Brachypodium
           distachyon]
          Length = 368

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/96 (31%), Positives = 52/96 (54%)
 Frame = -2

Query: 642 EDVRLLHLNGVVINKMSTDKKVAEFFSRICPQGPIASKPNHLGNLFLKVKDHHTRKKNIW 463
           ED+R+LHL G+++N+++ +   + FF+RIC Q  + S  N+L +L L+V  +   + + W
Sbjct: 266 EDMRILHLRGILVNQINGESDASRFFNRICSQ-VLWSNKNYLKDLMLEVNKYSGSRLHKW 324

Query: 462 MEEAKRKYCSSPXXXXXXXXXXXXXXXXXLQTSFTI 355
             +  R Y S+P                 LQT+FT+
Sbjct: 325 RAQLVRNYFSNPWVAMSVVAAVLLLGMTILQTTFTV 360


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