BLASTX nr result
ID: Zingiber25_contig00032781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00032781
(717 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 187 3e-45
ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron sp... 182 9e-44
ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron sp... 181 2e-43
gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative ... 180 4e-43
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ... 180 4e-43
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ... 180 4e-43
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ... 180 4e-43
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ... 180 4e-43
ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron sp... 178 2e-42
ref|XP_006660084.1| PREDICTED: chloroplastic group IIA intron sp... 177 4e-42
ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [A... 177 4e-42
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp... 174 3e-41
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp... 174 3e-41
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp... 174 3e-41
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr... 173 4e-41
ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [S... 173 6e-41
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp... 172 7e-41
tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays] 172 1e-40
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp... 170 4e-40
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 170 5e-40
>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 187 bits (475), Expect = 3e-45
Identities = 116/258 (44%), Positives = 146/258 (56%), Gaps = 22/258 (8%)
Frame = +3
Query: 9 GRRIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQ 188
G ++PW+ E K+VFRR KK K +TAAEL L P LL RLRGE GVT+
Sbjct: 173 GGKMPWLKTE--KVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTE 230
Query: 189 VVVEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKY- 365
VV++I W++DEL MV+ PL RNMDRAREI+E KT GLV+W K+D LV+YRG Y
Sbjct: 231 SVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQ 290
Query: 366 -----------GMILHTPSCYNAVDQVNLGIFDSNRAIFSV-----NSGGIM--KDMENN 491
G++ + + ++Q N F+ + I + +G M KD E +
Sbjct: 291 STSKHFQKMRPGLVAGADASNSKLNQSN---FEDDLTISEIKFHESTTGEKMGRKDGEED 347
Query: 492 IYLTN---KNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXX 662
T + V PV GSLYEREA+RLLDGLGPRF+DWW PLPVDADLLPEV+
Sbjct: 348 SSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGF 407
Query: 663 XXXXXXXXXXXXVKLTDD 716
KLTDD
Sbjct: 408 RPPFRLSPPQTRSKLTDD 425
>ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Setaria italica]
Length = 748
Score = 182 bits (462), Expect = 9e-44
Identities = 107/229 (46%), Positives = 136/229 (59%), Gaps = 12/229 (5%)
Frame = +3
Query: 3 GAGRRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXX 176
G R +PW +A + K+ RREKK +E T AE L L RL+
Sbjct: 137 GKARAVPWAAARDEGLKVALRREKKAREPTRAEAELEAGELDRLQRLARGMGRWARAKKA 196
Query: 177 GVTQVVVEEIQRGW-RNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYR 353
GVT VVE+++R W R +EL VRIVEPLRRNMDRAREI+E KTGGLV+W K D +YR
Sbjct: 197 GVTDEVVEDLRREWARGEELAAVRIVEPLRRNMDRAREILEIKTGGLVIWTKGDIHFVYR 256
Query: 354 GEKYGMIL-HTPSCYNAVDQVNLGIFDSNRAIFSV-NSGGIMKDMEN---NIYLTNKNSV 518
G Y + H+ +V V+ ++ +RA N G ++ D + ++ N SV
Sbjct: 257 GSNYQQNMKHSQYSVASVQNVSPVKYNVHRAQIKYGNEGEVLTDGNSKGDDVIQENDQSV 316
Query: 519 T----QHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
+ P++G+LYERE NRLLD LGPRFVDWWW TPLPVDADLLPE V
Sbjct: 317 CGQKDEEPIKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEFV 365
>ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Setaria italica]
Length = 736
Score = 181 bits (459), Expect = 2e-43
Identities = 104/222 (46%), Positives = 132/222 (59%), Gaps = 5/222 (2%)
Frame = +3
Query: 3 GAGRRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXX 176
G R +PW +A + K+ RREKK +E T AE L L RL+
Sbjct: 137 GKARAVPWAAARDEGLKVALRREKKAREPTRAEAELEAGELDRLQRLARGMGRWARAKKA 196
Query: 177 GVTQVVVEEIQRGW-RNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYR 353
GVT VVE+++R W R +EL VRIVEPLRRNMDRAREI+E KTGGLV+W K D +YR
Sbjct: 197 GVTDEVVEDLRREWARGEELAAVRIVEPLRRNMDRAREILEIKTGGLVIWTKGDIHFVYR 256
Query: 354 GEKYGMIL-HTPSCYNAVDQVNLGIFDSNRAIFSV-NSGGIMKDMENNIYLTNKNSVTQH 527
G Y + H+ +V V+ ++ +RA N G ++ D + + +
Sbjct: 257 GSNYQQNMKHSQYSVASVQNVSPVKYNVHRAQIKYGNEGEVLTDGNSK-----GDDKDEE 311
Query: 528 PVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
P++G+LYERE NRLLD LGPRFVDWWW TPLPVDADLLPE V
Sbjct: 312 PIKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEFV 353
>gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative isoform 5
[Theobroma cacao]
Length = 788
Score = 180 bits (457), Expect = 4e-43
Identities = 110/255 (43%), Positives = 142/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW+ E +K+VFRR KK K +T AE+ L DLL RLR + GVT+ V
Sbjct: 191 KMPWLREE-EKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAV 249
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+ WR +ELVMV+ PL RNMDRAREI+E KT GLVVW K+D LV+YRG +G+
Sbjct: 250 VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 309
Query: 375 -----LHTPSC-------------YNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENN--- 491
+ P C + + +N+ + N + ++ SG +D E
Sbjct: 310 SKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGS--TLQSGLYREDREKESMP 367
Query: 492 IYLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXX 671
I + K PV GSLYERE +RLLDGLGPRF+DWW R PLP+DADLLPE V
Sbjct: 368 INIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPP 427
Query: 672 XXXXXXXXXVKLTDD 716
LTDD
Sbjct: 428 LRLSPPNTRPNLTDD 442
>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4
[Theobroma cacao]
Length = 767
Score = 180 bits (457), Expect = 4e-43
Identities = 110/255 (43%), Positives = 142/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW+ E +K+VFRR KK K +T AE+ L DLL RLR + GVT+ V
Sbjct: 165 KMPWLREE-EKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAV 223
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+ WR +ELVMV+ PL RNMDRAREI+E KT GLVVW K+D LV+YRG +G+
Sbjct: 224 VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 283
Query: 375 -----LHTPSC-------------YNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENN--- 491
+ P C + + +N+ + N + ++ SG +D E
Sbjct: 284 SKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGS--TLQSGLYREDREKESMP 341
Query: 492 IYLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXX 671
I + K PV GSLYERE +RLLDGLGPRF+DWW R PLP+DADLLPE V
Sbjct: 342 INIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPP 401
Query: 672 XXXXXXXXXVKLTDD 716
LTDD
Sbjct: 402 LRLSPPNTRPNLTDD 416
>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3
[Theobroma cacao]
Length = 788
Score = 180 bits (457), Expect = 4e-43
Identities = 110/255 (43%), Positives = 142/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW+ E +K+VFRR KK K +T AE+ L DLL RLR + GVT+ V
Sbjct: 165 KMPWLREE-EKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAV 223
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+ WR +ELVMV+ PL RNMDRAREI+E KT GLVVW K+D LV+YRG +G+
Sbjct: 224 VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 283
Query: 375 -----LHTPSC-------------YNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENN--- 491
+ P C + + +N+ + N + ++ SG +D E
Sbjct: 284 SKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGS--TLQSGLYREDREKESMP 341
Query: 492 IYLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXX 671
I + K PV GSLYERE +RLLDGLGPRF+DWW R PLP+DADLLPE V
Sbjct: 342 INIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPP 401
Query: 672 XXXXXXXXXVKLTDD 716
LTDD
Sbjct: 402 LRLSPPNTRPNLTDD 416
>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2
[Theobroma cacao]
Length = 804
Score = 180 bits (457), Expect = 4e-43
Identities = 110/255 (43%), Positives = 142/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW+ E +K+VFRR KK K +T AE+ L DLL RLR + GVT+ V
Sbjct: 191 KMPWLREE-EKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAV 249
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+ WR +ELVMV+ PL RNMDRAREI+E KT GLVVW K+D LV+YRG +G+
Sbjct: 250 VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 309
Query: 375 -----LHTPSC-------------YNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENN--- 491
+ P C + + +N+ + N + ++ SG +D E
Sbjct: 310 SKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGS--TLQSGLYREDREKESMP 367
Query: 492 IYLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXX 671
I + K PV GSLYERE +RLLDGLGPRF+DWW R PLP+DADLLPE V
Sbjct: 368 INIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPP 427
Query: 672 XXXXXXXXXVKLTDD 716
LTDD
Sbjct: 428 LRLSPPNTRPNLTDD 442
>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1
[Theobroma cacao]
Length = 818
Score = 180 bits (457), Expect = 4e-43
Identities = 110/255 (43%), Positives = 142/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW+ E +K+VFRR KK K +T AE+ L DLL RLR + GVT+ V
Sbjct: 191 KMPWLREE-EKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAV 249
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+ WR +ELVMV+ PL RNMDRAREI+E KT GLVVW K+D LV+YRG +G+
Sbjct: 250 VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 309
Query: 375 -----LHTPSC-------------YNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENN--- 491
+ P C + + +N+ + N + ++ SG +D E
Sbjct: 310 SKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGS--TLQSGLYREDREKESMP 367
Query: 492 IYLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXX 671
I + K PV GSLYERE +RLLDGLGPRF+DWW R PLP+DADLLPE V
Sbjct: 368 INIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPP 427
Query: 672 XXXXXXXXXVKLTDD 716
LTDD
Sbjct: 428 LRLSPPNTRPNLTDD 442
>ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 178 bits (451), Expect = 2e-42
Identities = 106/225 (47%), Positives = 135/225 (60%), Gaps = 11/225 (4%)
Frame = +3
Query: 12 RRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVT 185
R +PW +A + K+V RREKKV+E T AE L P LL RLR GVT
Sbjct: 131 RAVPWSAARDEHLKVVLRREKKVREPTRAERELGPALLERLRRAARGMDRWARAKKAGVT 190
Query: 186 QVVVEEIQRGWRN-DELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEK 362
VVE+++ W + EL VRIVEPLRR MDRAREI+E KTGGLVVW K D +YRG
Sbjct: 191 DEVVEDVRSEWSSGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTKGDIHFVYRGSD 250
Query: 363 YGMILHTPSCYNAVDQVNL-----GIFDSNRAIFSVNSG---GIMKDMENNIYLTNKNSV 518
Y + + +N V + + SN + ++G G ++ +++I +
Sbjct: 251 Y--VHNMKYSHNFVADIQKVRTPQEKYKSNVELLGKHNGKAKGAFREKDSSIDI----QT 304
Query: 519 TQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
+ PV+G+LYERE NRLLD LGPRF+DWWW TPLPVDADLLPEVV
Sbjct: 305 YEEPVKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVV 349
>ref|XP_006660084.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Oryza brachyantha]
Length = 621
Score = 177 bits (448), Expect = 4e-42
Identities = 108/225 (48%), Positives = 132/225 (58%), Gaps = 8/225 (3%)
Frame = +3
Query: 3 GAGRRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXX 176
G R +PW +A + K+V RREKKV+ T AE L P L RLR
Sbjct: 9 GRQRAVPWAAARDEELKVVLRREKKVRVPTRAEAELEPAELERLRQLARGMDRWARAKKA 68
Query: 177 GVTQVVVEEIQRGW--RNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIY 350
G+T VVEE++ W R EL VRIVEPL+RNMDRAREI+E KTGG+VVW K D +Y
Sbjct: 69 GITDEVVEELRGAWARRVQELAGVRIVEPLQRNMDRAREILEIKTGGIVVWTKGDIHFVY 128
Query: 351 RGEKYGMILHTPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENNIYLTNKNSVTQH- 527
RG Y I ++ ++ V + +N F + G E+ + N S+ H
Sbjct: 129 RGANY--IENSKRHHDFVHNEEVSPVTAN---FPASQGKYGSKAES--FHENDQSIDVHK 181
Query: 528 ---PVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
PV+G+LYERE NRLLD LGPRFVDWWW TPLPVDADLLPEVV
Sbjct: 182 DNEPVKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVV 226
>ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
gi|548844430|gb|ERN04039.1| hypothetical protein
AMTR_s00079p00185530 [Amborella trichopoda]
Length = 886
Score = 177 bits (448), Expect = 4e-42
Identities = 107/234 (45%), Positives = 133/234 (56%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
++PW AE K VFRR KK K T AEL L LL RLR GVTQ V
Sbjct: 305 KLPWTMAE--KNVFRRVKKEKTPTKAELSLPKPLLTRLRDRGRTLTKWVKVKKAGVTQEV 362
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
+ EI W+ EL M++ PL RNMDRA EIVETKTGGLVVW K+ LV+YRG Y
Sbjct: 363 MNEIYAVWKKRELAMLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVYRGTNY--- 419
Query: 375 LHTPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENNIYLTNKNSVTQHPVEGSLYER 554
H+ S + + +L +FD N+ S +G + + IY + + ++ +L+ER
Sbjct: 420 -HSLSKTSETNPWSLELFDDNK--ISAPNGFLNFKDDTMIYQAGSDGL----MKETLFER 472
Query: 555 EANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXXXXXXXXXXVKLTDD 716
EANRLLD LGPRF+DWWW TPLPVDADLLPEV+ KLTD+
Sbjct: 473 EANRLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDE 526
>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X5 [Glycine max]
Length = 744
Score = 174 bits (441), Expect = 3e-41
Identities = 110/240 (45%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
R+PW E K F + K+ K +TAAEL L LL RLR E GVTQ V
Sbjct: 144 RMPWEKDE--KFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDV 201
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V++I+R WR +EL M++ PL RNMDRAREIVETKTGGLVV K+DFLV+YRG + +
Sbjct: 202 VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261
Query: 375 LH-TPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMEN------NIYLTNKNSVTQHPV 533
+PS ++N + IF V S +M N + T V V
Sbjct: 262 TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321
Query: 534 EGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXXXXXXXXXXVKLTD 713
GSLYERE RLLDGLGPRF+DWW PLPVDADLLPE V KLTD
Sbjct: 322 NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381
>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Glycine max]
gi|571550194|ref|XP_006603056.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X3 [Glycine max]
gi|571550197|ref|XP_006603057.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X4 [Glycine max]
Length = 747
Score = 174 bits (441), Expect = 3e-41
Identities = 110/240 (45%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
R+PW E K F + K+ K +TAAEL L LL RLR E GVTQ V
Sbjct: 144 RMPWEKDE--KFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDV 201
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V++I+R WR +EL M++ PL RNMDRAREIVETKTGGLVV K+DFLV+YRG + +
Sbjct: 202 VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261
Query: 375 LH-TPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMEN------NIYLTNKNSVTQHPV 533
+PS ++N + IF V S +M N + T V V
Sbjct: 262 TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321
Query: 534 EGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXXXXXXXXXXVKLTD 713
GSLYERE RLLDGLGPRF+DWW PLPVDADLLPE V KLTD
Sbjct: 322 NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381
>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Glycine max]
Length = 750
Score = 174 bits (441), Expect = 3e-41
Identities = 110/240 (45%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
R+PW E K F + K+ K +TAAEL L LL RLR E GVTQ V
Sbjct: 144 RMPWEKDE--KFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDV 201
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V++I+R WR +EL M++ PL RNMDRAREIVETKTGGLVV K+DFLV+YRG + +
Sbjct: 202 VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261
Query: 375 LH-TPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMEN------NIYLTNKNSVTQHPV 533
+PS ++N + IF V S +M N + T V V
Sbjct: 262 TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321
Query: 534 EGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXXXXXXXXXXVKLTD 713
GSLYERE RLLDGLGPRF+DWW PLPVDADLLPE V KLTD
Sbjct: 322 NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381
>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
gi|557532797|gb|ESR43980.1| hypothetical protein
CICLE_v10013368mg [Citrus clementina]
Length = 770
Score = 173 bits (439), Expect = 4e-41
Identities = 108/254 (42%), Positives = 135/254 (53%), Gaps = 16/254 (6%)
Frame = +3
Query: 3 GAGRRIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGV 182
G G ++PW+ E + VFRR KK + +T AE +L +L+ RL+ E GV
Sbjct: 156 GFGGKVPWLREE--RFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVKVKKAGV 213
Query: 183 TQVVVEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEK 362
T+ VV EI+ WR +EL MV+ PL RNMDRAREI+E KTGGLV+W K+D V+YRG+
Sbjct: 214 TESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGD- 272
Query: 363 YGMILHTPSCYNAVD----------------QVNLGIFDSNRAIFSVNSGGIMKDMENNI 494
G C + D +VN+ SN A N +KD E N
Sbjct: 273 -GSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS--LKDGEENS 329
Query: 495 YLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXX 674
T+ ++ SLYERE +RLLDGLGPRFVDWW PLPVD DLLPEVV
Sbjct: 330 LPTSIFMDKNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPF 389
Query: 675 XXXXXXXXVKLTDD 716
KLTDD
Sbjct: 390 RLSPPDARSKLTDD 403
>ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein
SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 173 bits (438), Expect = 6e-41
Identities = 104/219 (47%), Positives = 130/219 (59%), Gaps = 5/219 (2%)
Frame = +3
Query: 12 RRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVT 185
R +PW +A + K+ RREKK ++ T AE L D L RLR GVT
Sbjct: 137 RAVPWAAARDEGLKVALRREKKPRKPTRAETELETDELDRLRRLARGMGRWARAKKAGVT 196
Query: 186 QVVVEEIQRGWRN-DELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEK 362
VVEE++R W + +EL VRIVEPLRR+MDRAREI+E KTGGLVVW K D +Y+G K
Sbjct: 197 DEVVEEMRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDIHFVYKGSK 256
Query: 363 YGMILHTPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKD--MENNIYLTNKNSVTQHPVE 536
Y + + V V+ G ++ N G D EN+ + + + PV+
Sbjct: 257 YQQ--NAKHSHTFVTNVHKG------SLVKQNVRGEADDAFQENDQSICGQKD--EEPVK 306
Query: 537 GSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
G+LYERE NRLLD LGPRFVDWWW TPLPVDADLLPE +
Sbjct: 307 GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFI 345
>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857343|ref|XP_006482226.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
Length = 771
Score = 172 bits (437), Expect = 7e-41
Identities = 108/254 (42%), Positives = 134/254 (52%), Gaps = 16/254 (6%)
Frame = +3
Query: 3 GAGRRIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGV 182
G G ++PW+ D+ VFRR KK + +T AE +L +LL RL+ E GV
Sbjct: 150 GFGGKVPWLRE--DRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGV 207
Query: 183 TQVVVEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEK 362
T+ VV EI+ WR +EL MV+ PL RNMDRAREI+E KTGGLV+W K+D V+YRG+
Sbjct: 208 TESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDS 267
Query: 363 YGMILHTPSCYNAVD----------------QVNLGIFDSNRAIFSVNSGGIMKDMENNI 494
C + D +VN+ SN A N +KD E N
Sbjct: 268 SKS--SVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS--LKDGEENS 323
Query: 495 YLTNKNSVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXX 674
T+ ++ SLYERE +RLLDGLGPRFVDWW PLPVD DLLPEVV
Sbjct: 324 LPTSIFMDKNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPF 383
Query: 675 XXXXXXXXVKLTDD 716
KLTDD
Sbjct: 384 RLSPPDARSKLTDD 397
>tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 496
Score = 172 bits (435), Expect = 1e-40
Identities = 106/228 (46%), Positives = 131/228 (57%), Gaps = 14/228 (6%)
Frame = +3
Query: 12 RRIPWVSAEVD--KLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVT 185
R +PW +A + K+ RREKK +E T AE L L RLR GVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVT 197
Query: 186 QVVVEEIQRGWRN-DELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEK 362
VV+E++R W + +EL VRIVEPLRR+MDRAREI+E KTGGLVVW K D +YRG K
Sbjct: 198 DEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSK 257
Query: 363 YGMILHTPSCYNAVDQVNLG-IFDSNRAIFSVNSGGIMKDMENNI------YLTNKNSVT 521
Y + + + V+ G + N + G I + NN + N S+
Sbjct: 258 YQQ--NAKHSHTFLTNVHKGYLVKHNVHTTLLKYGSIGPVLINNYGEADDAFQENDQSIC 315
Query: 522 ----QHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
+ PV+G+LYERE NRLLD LGPRFVDWWW TPLPVDADLLPE V
Sbjct: 316 GQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFV 363
>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cicer arietinum]
Length = 764
Score = 170 bits (431), Expect = 4e-40
Identities = 108/249 (43%), Positives = 140/249 (56%), Gaps = 15/249 (6%)
Frame = +3
Query: 15 RIPWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVV 194
R+PW E K+ F + K+ K +AA+L + +L RLRGE GVTQ V
Sbjct: 151 RMPWEKDE--KIGFFKVKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQDV 208
Query: 195 VEEIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMI 374
V+EI+R WR +EL MV+ PL +NM RAREIVETKTGGLV+W K+D LV+YRG Y +
Sbjct: 209 VDEIKRSWRMNELAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQLT 268
Query: 375 ------LHT-------PSCYNAVDQVNLGIFDSNRAIFSVNSGGIM-KDMENNIYLTNKN 512
+HT + Y + + D +R + +S I+ + E+ L+ N
Sbjct: 269 SKSSPKIHTGYIRSQKTNSYETNEVKSATKGDLSRVESTQSSSEILSSNAEHKDSLSTDN 328
Query: 513 -SVTQHPVEGSLYEREANRLLDGLGPRFVDWWWRTPLPVDADLLPEVVXXXXXXXXXXXX 689
++ P GSLYE+E +RLLDGLGPRFVDWW PLPVDADLLPEVV
Sbjct: 329 YNMNYQPRSGSLYEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRLCPP 388
Query: 690 XXXVKLTDD 716
KLTDD
Sbjct: 389 HARSKLTDD 397
>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical
protein [Ricinus communis]
Length = 742
Score = 170 bits (430), Expect = 5e-40
Identities = 104/212 (49%), Positives = 129/212 (60%), Gaps = 1/212 (0%)
Frame = +3
Query: 21 PWVSAEVDKLVFRREKKVKEITAAELVLAPDLLFRLRGEXXXXXXXXXXXXXGVTQVVVE 200
PW E K V+ R KK K +T AEL+L +LL LR E GVTQ VV+
Sbjct: 173 PWEREE--KFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQSVVD 230
Query: 201 EIQRGWRNDELVMVRIVEPLRRNMDRAREIVETKTGGLVVWIKRDFLVIYRGEKYGMILH 380
+I+ WRN+EL MV+ PL RNMDRAREIVE KTGGLVVW ++D LVIYRG Y +
Sbjct: 231 QIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNYHL--- 287
Query: 381 TPSCYNAVDQVNLGIFDSNRAIFSVNSGGIMKDMENNIYL-TNKNSVTQHPVEGSLYERE 557
T S + + +G D G + + +I++ + N+ T + GSL+ERE
Sbjct: 288 TKSSHVSTMDEKIGSKD-----------GEEEYIPTSIFIGDDANTPT---INGSLFERE 333
Query: 558 ANRLLDGLGPRFVDWWWRTPLPVDADLLPEVV 653
+RLLDGLGPRFVDWW R PLPVDADLLPEVV
Sbjct: 334 TDRLLDGLGPRFVDWWMRKPLPVDADLLPEVV 365