BLASTX nr result
ID: Zingiber25_contig00032643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00032643
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 98 1e-18
ref|XP_006651532.1| PREDICTED: transcription initiation factor T... 96 4e-18
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 96 4e-18
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 96 4e-18
ref|NP_001050459.2| Os03g0441000 [Oryza sativa Japonica Group] g... 96 4e-18
gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indi... 96 4e-18
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] 96 4e-18
gb|ABF96849.1| Transcription initiation factor TFIID component T... 96 4e-18
gb|ABF96848.1| Transcription initiation factor TFIID component T... 96 4e-18
dbj|BAJ86789.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 5e-18
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 96 6e-18
gb|EXB38469.1| Transcription initiation factor TFIID subunit 4B ... 93 3e-17
ref|XP_002510115.1| transcription initiation factor, putative [R... 93 3e-17
gb|AAO23083.1| unknown protein [Oryza sativa Japonica Group] 93 4e-17
dbj|BAB08277.1| unnamed protein product [Arabidopsis thaliana] 92 7e-17
ref|XP_003562365.1| PREDICTED: uncharacterized protein LOC100829... 92 7e-17
ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thalian... 92 7e-17
ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana] ... 92 7e-17
gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, part... 91 1e-16
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 91 1e-16
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 98.2 bits (243), Expect = 1e-18
Identities = 54/90 (60%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSASVPPT-----GSTTKSPLKKPSAGQKKPLDALGSSPLMS 91
+N S S+ S D +T +TS ++ T G+ K+P+KKPS GQKKPLDALGSSP S
Sbjct: 545 SNSASSSMSSHMDTSTLLTSRTLSVTSPLGLGNNGKTPVKKPSIGQKKPLDALGSSPPPS 604
Query: 90 SKKQKTAGTSLDQSIEQLNDVTVVSGVNLR 1
KKQK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 605 GKKQKVSGGFLDQSIEQLNDVTAVSGVNLR 634
>ref|XP_006651532.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Oryza brachyantha]
Length = 814
Score = 96.3 bits (238), Expect = 4e-18
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 228 SQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQKTAGTSLDQ 52
+Q + N Q+ A+ PP +T+K+P KK SAGQKKPLDALGSSP SSKKQKT+G DQ
Sbjct: 456 TQVEPNMQIQPATQTPPPAATSKTPQKKTSAGQKKPLDALGSSPPPSSKKQKTSGGYHDQ 515
Query: 51 SIEQLNDVTVVSGVNLR 1
SI+QLNDVT VSGVNLR
Sbjct: 516 SIDQLNDVTAVSGVNLR 532
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTS---ASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N VS S+ + D N + S + P G T++P KKPS GQKKPL+ALGSSP + SKK
Sbjct: 542 NSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKK 601
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 602 QKVSGAFLDQSIEQLNDVTAVSGVNLR 628
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTS---ASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N VS S+ + D N + S + P G T++P KKPS GQKKPL+ALGSSP + SKK
Sbjct: 499 NSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKK 558
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 559 QKVSGAFLDQSIEQLNDVTAVSGVNLR 585
>ref|NP_001050459.2| Os03g0441000 [Oryza sativa Japonica Group]
gi|255674628|dbj|BAF12373.2| Os03g0441000 [Oryza sativa
Japonica Group]
Length = 370
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQ 79
++Q S +QA+ N Q+ A+ PP + +K+P KK SAGQKKPLDALGSSP SSKKQ
Sbjct: 136 SSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKKQ 195
Query: 78 KTAGTSLDQSIEQLNDVTVVSGVNLR 1
KT+G DQSI+QLNDVT VSGVNLR
Sbjct: 196 KTSGGYHDQSIDQLNDVTAVSGVNLR 221
>gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indica Group]
Length = 819
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQ 79
++Q S +QA+ N Q+ A+ PP + +K+P KK SAGQKKPLDALGSSP SSKKQ
Sbjct: 451 SSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKKQ 510
Query: 78 KTAGTSLDQSIEQLNDVTVVSGVNLR 1
KT+G DQSI+QLNDVT VSGVNLR
Sbjct: 511 KTSGGYHDQSIDQLNDVTAVSGVNLR 536
>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
Length = 906
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTS---ASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N VS S+ + D N + S + P G T++P KKPS GQKKPL+ALGSSP + SKK
Sbjct: 587 NSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKK 646
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 647 QKVSGAFLDQSIEQLNDVTAVSGVNLR 673
>gb|ABF96849.1| Transcription initiation factor TFIID component TAF4 family
protein, expressed [Oryza sativa Japonica Group]
Length = 685
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQ 79
++Q S +QA+ N Q+ A+ PP + +K+P KK SAGQKKPLDALGSSP SSKKQ
Sbjct: 451 SSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKKQ 510
Query: 78 KTAGTSLDQSIEQLNDVTVVSGVNLR 1
KT+G DQSI+QLNDVT VSGVNLR
Sbjct: 511 KTSGGYHDQSIDQLNDVTAVSGVNLR 536
>gb|ABF96848.1| Transcription initiation factor TFIID component TAF4 family
protein, expressed [Oryza sativa Japonica Group]
gi|222625198|gb|EEE59330.1| hypothetical protein
OsJ_11407 [Oryza sativa Japonica Group]
Length = 819
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQ 79
++Q S +QA+ N Q+ A+ PP + +K+P KK SAGQKKPLDALGSSP SSKKQ
Sbjct: 451 SSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKKQ 510
Query: 78 KTAGTSLDQSIEQLNDVTVVSGVNLR 1
KT+G DQSI+QLNDVT VSGVNLR
Sbjct: 511 KTSGGYHDQSIDQLNDVTAVSGVNLR 536
>dbj|BAJ86789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = -2
Query: 243 SGSVPSQADQNTQVTSASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQKTAGT 64
S PS+ + Q S PP+G+ +K+P KKPSAGQKKPL+A+GSSPL S KKQK +G
Sbjct: 242 SYGTPSELNMQIQ-PSTQAPPSGAASKTPQKKPSAGQKKPLEAIGSSPLPSGKKQKGSGG 300
Query: 63 SLDQSIEQLNDVTVVSGVNLR 1
DQSI+QLNDVT VSGVNLR
Sbjct: 301 FHDQSIDQLNDVTAVSGVNLR 321
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 95.5 bits (236), Expect = 6e-18
Identities = 53/90 (58%), Positives = 62/90 (68%), Gaps = 5/90 (5%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSASVPPT-----GSTTKSPLKKPSAGQKKPLDALGSSPLMS 91
+N S S+ S D +T +TS ++ T G+ K P+KKPS GQKKPLD LGSSP S
Sbjct: 545 SNSASSSMSSHMDTSTLLTSRTLSVTSPLGLGNNGKIPVKKPSIGQKKPLDVLGSSPPPS 604
Query: 90 SKKQKTAGTSLDQSIEQLNDVTVVSGVNLR 1
KKQK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 605 GKKQKVSGGFLDQSIEQLNDVTAVSGVNLR 634
>gb|EXB38469.1| Transcription initiation factor TFIID subunit 4B [Morus notabilis]
Length = 961
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQV---TSASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N +S ++ Q N + PP G+ K+P KKPS GQKKPL+ALGSSP + KK
Sbjct: 572 NTISSNMSMQLGPNIPLGPRAPIGTPPVGTNNKTPPKKPSVGQKKPLEALGSSPPPAGKK 631
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 632 QKVSGNFLDQSIEQLNDVTAVSGVNLR 658
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 93.2 bits (230), Expect = 3e-17
Identities = 52/88 (59%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTS---ASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSK 85
+N VS S+ Q D N Q + G ++P KK S GQKKPL+ALGSSP MSSK
Sbjct: 540 SNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNARTPTKKLSIGQKKPLEALGSSPPMSSK 599
Query: 84 KQKTAGTSLDQSIEQLNDVTVVSGVNLR 1
KQK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 600 KQKVSGAFLDQSIEQLNDVTAVSGVNLR 627
>gb|AAO23083.1| unknown protein [Oryza sativa Japonica Group]
Length = 755
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/83 (60%), Positives = 57/83 (68%)
Frame = -2
Query: 249 QVSGSVPSQADQNTQVTSASVPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQKTA 70
Q + S P N + PP + +K+P KK SAGQKKPLDALGSSP SSKKQKT+
Sbjct: 419 QKTKSFPPTEHTNKIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKKQKTS 478
Query: 69 GTSLDQSIEQLNDVTVVSGVNLR 1
G DQSI+QLNDVT VSGVNLR
Sbjct: 479 GGYHDQSIDQLNDVTAVSGVNLR 501
>dbj|BAB08277.1| unnamed protein product [Arabidopsis thaliana]
Length = 689
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTSASVPPT---GSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
+ VS S+ +Q D +T + S T G+ + P KKPS GQKKPL+ LGSSP SKK
Sbjct: 352 SSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLETLGSSPPPPSKK 411
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK AG S+DQSIEQLNDVT VSGVNLR
Sbjct: 412 QKVAGNSMDQSIEQLNDVTAVSGVNLR 438
>ref|XP_003562365.1| PREDICTED: uncharacterized protein LOC100829985 [Brachypodium
distachyon]
Length = 806
Score = 92.0 bits (227), Expect = 7e-17
Identities = 50/86 (58%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 TNQVSGSVPSQADQNTQVTSAS-VPPTGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKKQ 79
++Q S + A+ Q+ S + PP+G+ +K+P KKPSAGQKKPL+A+GSSP SSKKQ
Sbjct: 437 SSQPHRSHGTAAELAIQIQSGTQAPPSGAASKTPQKKPSAGQKKPLEAIGSSPPPSSKKQ 496
Query: 78 KTAGTSLDQSIEQLNDVTVVSGVNLR 1
K +G DQSI+QLNDVT VSGVNLR
Sbjct: 497 KGSGGFHDQSIDQLNDVTAVSGVNLR 522
>ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thaliana]
gi|550540908|sp|F4K4L7.1|TAF4B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 4b;
AltName: Full=TBP-associated factor 4b; Short=AtTAF4b
gi|332007531|gb|AED94914.1| TBP-associated factor 4
[Arabidopsis thaliana]
Length = 852
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTSASVPPT---GSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
+ VS S+ +Q D +T + S T G+ + P KKPS GQKKPL+ LGSSP SKK
Sbjct: 463 SSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLETLGSSPPPPSKK 522
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK AG S+DQSIEQLNDVT VSGVNLR
Sbjct: 523 QKVAGNSMDQSIEQLNDVTAVSGVNLR 549
>ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana]
gi|38490053|gb|AAR21620.1| TATA-binding protein
associated factor 4b [Arabidopsis thaliana]
gi|110738778|dbj|BAF01312.1| hypothetical protein
[Arabidopsis thaliana] gi|332007530|gb|AED94913.1|
TBP-associated factor 4 [Arabidopsis thaliana]
Length = 823
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTSASVPPT---GSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
+ VS S+ +Q D +T + S T G+ + P KKPS GQKKPL+ LGSSP SKK
Sbjct: 463 SSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLETLGSSPPPPSKK 522
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK AG S+DQSIEQLNDVT VSGVNLR
Sbjct: 523 QKVAGNSMDQSIEQLNDVTAVSGVNLR 549
>gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, partial [Theobroma
cacao]
Length = 707
Score = 91.3 bits (225), Expect = 1e-16
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTSA--SVPP-TGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N VS + +Q D N + S SVP G+ +++P KKPS GQKKPL+ LGSSP SSKK
Sbjct: 568 NSVS-PITTQVDSNVLLGSRNPSVPSLAGANSRTPQKKPSVGQKKPLETLGSSPPPSSKK 626
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 627 QKVSGAFLDQSIEQLNDVTAVSGVNLR 653
>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
Length = 944
Score = 91.3 bits (225), Expect = 1e-16
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = -2
Query: 252 NQVSGSVPSQADQNTQVTSA--SVPP-TGSTTKSPLKKPSAGQKKPLDALGSSPLMSSKK 82
N VS + +Q D N + S SVP G+ +++P KKPS GQKKPL+ LGSSP SSKK
Sbjct: 569 NSVS-PITTQVDSNVLLGSRNPSVPSLAGANSRTPQKKPSVGQKKPLETLGSSPPPSSKK 627
Query: 81 QKTAGTSLDQSIEQLNDVTVVSGVNLR 1
QK +G LDQSIEQLNDVT VSGVNLR
Sbjct: 628 QKVSGAFLDQSIEQLNDVTAVSGVNLR 654