BLASTX nr result
ID: Zingiber25_contig00032555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00032555
(812 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN34281.1| nucleic acid binding protein [Cucumis melo subsp.... 67 1e-08
gb|EMJ18348.1| hypothetical protein PRUPE_ppa003054mg [Prunus pe... 66 1e-08
ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247... 65 4e-08
ref|XP_004169819.1| PREDICTED: uncharacterized protein LOC101230... 63 1e-07
ref|XP_004141493.1| PREDICTED: uncharacterized protein LOC101212... 63 1e-07
ref|XP_006482308.1| PREDICTED: uncharacterized protein LOC102626... 62 2e-07
ref|XP_006430828.1| hypothetical protein CICLE_v10013582mg, part... 62 2e-07
ref|XP_004952762.1| PREDICTED: zinc finger CCHC domain-containin... 62 3e-07
ref|XP_004952760.1| PREDICTED: zinc finger CCHC domain-containin... 62 3e-07
ref|XP_004304149.1| PREDICTED: uncharacterized protein LOC101295... 61 4e-07
ref|XP_002452286.1| hypothetical protein SORBIDRAFT_04g023010 [S... 59 2e-06
gb|AFW62642.1| nucleic acid binding protein [Zea mays] 58 5e-06
ref|NP_001149074.1| nucleic acid binding protein [Zea mays] gi|1... 58 5e-06
>gb|ADN34281.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 610
Score = 66.6 bits (161), Expect = 1e-08
Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXY-------HHEQRW 210
QKKM+V FPGINAPIP+NAD +LWA P+ HH+QRW
Sbjct: 466 QKKMSVEFPGINAPIPENADERLWAPEPSSSGLPRNRSNQRLNHYPEYDTRGNDHHQQRW 525
Query: 211 SSDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSR--------RRSPKSERSVSERGWRS 366
S D RDD +D ++S+ RSP R S+RG RS
Sbjct: 526 SRDYRDDRPPGVDSIKSPPSFTPRYGGHDFSYDSQTPRGSFSTSRSPNLGRPHSDRGRRS 585
Query: 367 P 369
P
Sbjct: 586 P 586
>gb|EMJ18348.1| hypothetical protein PRUPE_ppa003054mg [Prunus persica]
Length = 608
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPT------XXXXXXXXXXXXXXXXXYHHEQRWS 213
Q+KMTV FPG+N PIP++AD +LWA P+ +H EQRWS
Sbjct: 444 QRKMTVEFPGLNGPIPEDADERLWAPGPSFSDHSRNRSYSRSNHYSEPVSRGHHREQRWS 503
Query: 214 SDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENS 387
D RDD ++ +N RSP RS S+RG R P S+E S
Sbjct: 504 RDYRDDGPPGVEPGSGPSSYPPRYGSYDYGYN-LPRSPTFGRSQSDRGRRIPLSNEGS 560
>ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera]
Length = 575
Score = 64.7 bits (156), Expect = 4e-08
Identities = 44/122 (36%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRDD 231
Q+KM+V FPGINAPIP NAD + WA HEQRWS D RDD
Sbjct: 397 QRKMSVEFPGINAPIPKNADERRWAAGSRPHRRLNHSYEPSSRRN--SHEQRWSRDYRDD 454
Query: 232 SMLNLDHXXXXXXXXXXXXXXXXDHN----------SRRRSPKSERSVSERGWRSPSSHE 381
+ D D + R RSP RS+S+RG RS HE
Sbjct: 455 GPCDSDMEISPPRSSYPPRHGGIDSSYTSYSTRGNIPRPRSPNFGRSLSDRGGRSSLVHE 514
Query: 382 NS 387
+S
Sbjct: 515 DS 516
>ref|XP_004169819.1| PREDICTED: uncharacterized protein LOC101230973 [Cucumis sativus]
Length = 610
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/126 (32%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXY-------HHEQRW 210
+KK +V FPGINAPIP+NAD +LWA P+ HH+QRW
Sbjct: 466 RKKKSVEFPGINAPIPENADERLWAPEPSNSGLSRNRSNQRLNHYPEYDTRGNDHHQQRW 525
Query: 211 SSDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSR--------RRSPKSERSVSERGWRS 366
S D RDD +D ++S+ RSP R S+RG RS
Sbjct: 526 SRDYRDDRPPGVDSIKSPPSFTPRYGGHDFSYDSQTPRGSFSTSRSPNLGRPHSDRGRRS 585
Query: 367 PSSHEN 384
P ++
Sbjct: 586 PQRDDD 591
>ref|XP_004141493.1| PREDICTED: uncharacterized protein LOC101212144 [Cucumis sativus]
Length = 610
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/126 (32%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXY-------HHEQRW 210
+KK +V FPGINAPIP+NAD +LWA P+ HH+QRW
Sbjct: 466 RKKKSVEFPGINAPIPENADERLWAPEPSNSGLSRNRSNQRLNHYPEYDTRGNDHHQQRW 525
Query: 211 SSDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSR--------RRSPKSERSVSERGWRS 366
S D RDD +D ++S+ RSP R S+RG RS
Sbjct: 526 SRDYRDDRPPGVDSIKSPPSFTPRYGGHDFSYDSQTPRGSFSTSRSPNLGRPHSDRGRRS 585
Query: 367 PSSHEN 384
P ++
Sbjct: 586 PQRDDD 591
>ref|XP_006482308.1| PREDICTED: uncharacterized protein LOC102626617 [Citrus sinensis]
Length = 553
Score = 62.4 bits (150), Expect = 2e-07
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPT------XXXXXXXXXXXXXXXXXYHHEQRWS 213
++KMT FPGINAPIP+NAD +LWA P+ +HEQRWS
Sbjct: 395 KRKMTAEFPGINAPIPENADERLWAARPSSSDSSRDRSHHRLNHHSESISRGRYHEQRWS 454
Query: 214 SDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSH 378
D RDD +D ++S RSP RS S+R +SH
Sbjct: 455 RDYRDDGPPGVDPVSSYPPRYGGYDY----YSSHSRSPTRGRSYSDRDRDDYASH 505
>ref|XP_006430828.1| hypothetical protein CICLE_v10013582mg, partial [Citrus clementina]
gi|557532885|gb|ESR44068.1| hypothetical protein
CICLE_v10013582mg, partial [Citrus clementina]
Length = 1076
Score = 62.4 bits (150), Expect = 2e-07
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPT------XXXXXXXXXXXXXXXXXYHHEQRWS 213
++KMT FPGINAPIP+NAD +LWA P+ +HEQRWS
Sbjct: 918 KRKMTTEFPGINAPIPENADERLWAARPSSSDSSRDRSHHRLNHHSESISRGRYHEQRWS 977
Query: 214 SDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSH 378
D RDD +D ++S RSP RS S+R +SH
Sbjct: 978 RDYRDDGPPGVDPVSSYPPRYGGYDY----YSSHSRSPTRGRSYSDRDRDDYASH 1028
>ref|XP_004952762.1| PREDICTED: zinc finger CCHC domain-containing protein 8-like
isoform X3 [Setaria italica]
Length = 531
Score = 61.6 bits (148), Expect = 3e-07
Identities = 40/115 (34%), Positives = 49/115 (42%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRDD 231
+K+MTV FPGINAPIP+N D LW + P H S D RD
Sbjct: 393 RKRMTVEFPGINAPIPENGDRWLWGSAPPQSSG--------------RHHSSDSRDYRDR 438
Query: 232 SMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENSTAN 396
DH H+ + SP RS S+RGWRSP +EN A+
Sbjct: 439 GPPGTDH----------YSSRYLSHDYGQLSPSLGRSHSDRGWRSPPRYENLPAD 483
>ref|XP_004952760.1| PREDICTED: zinc finger CCHC domain-containing protein 8-like
isoform X1 [Setaria italica]
gi|514713439|ref|XP_004952761.1| PREDICTED: zinc finger
CCHC domain-containing protein 8-like isoform X2
[Setaria italica]
Length = 532
Score = 61.6 bits (148), Expect = 3e-07
Identities = 40/115 (34%), Positives = 49/115 (42%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRDD 231
+K+MTV FPGINAPIP+N D LW + P H S D RD
Sbjct: 394 RKRMTVEFPGINAPIPENGDRWLWGSAPPQSSG--------------RHHSSDSRDYRDR 439
Query: 232 SMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENSTAN 396
DH H+ + SP RS S+RGWRSP +EN A+
Sbjct: 440 GPPGTDH----------YSSRYLSHDYGQLSPSLGRSHSDRGWRSPPRYENLPAD 484
>ref|XP_004304149.1| PREDICTED: uncharacterized protein LOC101295545 [Fragaria vesca
subsp. vesca]
Length = 553
Score = 61.2 bits (147), Expect = 4e-07
Identities = 42/118 (35%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPT------XXXXXXXXXXXXXXXXXYHHEQRWS 213
++KMTV FPG+NAPIP+NAD + W P+ ++ EQRWS
Sbjct: 389 RRKMTVGFPGMNAPIPENADERRWTPSPSVSDPSRNHSHNRPNHYYEPVSRGHYREQRWS 448
Query: 214 SDIRDDSMLNLDHXXXXXXXXXXXXXXXXDHNSRR-------RSPKSERSVSERGWRS 366
D RDD +D D+NSR RSP RS SERG RS
Sbjct: 449 RDYRDDGPPGVD--PGYGPSSYSPRYGSYDYNSRNTSNASASRSPTFGRSNSERGRRS 504
>ref|XP_002452286.1| hypothetical protein SORBIDRAFT_04g023010 [Sorghum bicolor]
gi|241932117|gb|EES05262.1| hypothetical protein
SORBIDRAFT_04g023010 [Sorghum bicolor]
Length = 519
Score = 59.3 bits (142), Expect = 2e-06
Identities = 38/115 (33%), Positives = 48/115 (41%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLWATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRDD 231
+K+MTV FPGINAP+P+N D LW + P H S D RD
Sbjct: 383 KKRMTVEFPGINAPVPENGDQWLWGSAPPQSSS--------------RHHSLDSRDYRDR 428
Query: 232 SMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENSTAN 396
DH H+ SP RS S+RGWRSP ++N A+
Sbjct: 429 GPPGADH----------YSSRYHSHDYGPLSPSLGRSHSDRGWRSPPRYDNPPAD 473
>gb|AFW62642.1| nucleic acid binding protein [Zea mays]
Length = 259
Score = 57.8 bits (138), Expect = 5e-06
Identities = 40/116 (34%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLW-ATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRD 228
+KKMTV FPGINAPIP+N D LW +TPP H S D D
Sbjct: 123 KKKMTVEFPGINAPIPENGDQWLWGSTPPQSSG---------------RHHSLDSRDFHD 167
Query: 229 DSMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENSTAN 396
DH H+ P RS S+RGWRSP ++N A+
Sbjct: 168 RGPPGADH----------YSPRYHSHDFGPLRPSIGRSHSDRGWRSPPRYDNPPAD 213
>ref|NP_001149074.1| nucleic acid binding protein [Zea mays] gi|195624520|gb|ACG34090.1|
nucleic acid binding protein [Zea mays]
gi|238006148|gb|ACR34109.1| unknown [Zea mays]
Length = 527
Score = 57.8 bits (138), Expect = 5e-06
Identities = 40/116 (34%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +1
Query: 52 QKKMTVAFPGINAPIPDNADPKLW-ATPPTXXXXXXXXXXXXXXXXXYHHEQRWSSDIRD 228
+KKMTV FPGINAPIP+N D LW +TPP H S D D
Sbjct: 391 KKKMTVEFPGINAPIPENGDQWLWGSTPPQSSG---------------RHHSLDSRDFHD 435
Query: 229 DSMLNLDHXXXXXXXXXXXXXXXXDHNSRRRSPKSERSVSERGWRSPSSHENSTAN 396
DH H+ P RS S+RGWRSP ++N A+
Sbjct: 436 RGPPGADH----------YSPRYHSHDFGPLRPSIGRSHSDRGWRSPPRYDNPPAD 481