BLASTX nr result
ID: Zingiber25_contig00032366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00032366
(800 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis] 318 2e-84
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi... 312 8e-83
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi... 310 3e-82
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi... 308 1e-81
gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily p... 308 2e-81
ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutr... 306 7e-81
ref|XP_002299777.1| pentatricopeptide repeat-containing family p... 306 7e-81
gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus... 305 1e-80
gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna] 303 6e-80
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi... 301 1e-79
dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protei... 301 2e-79
ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group] g... 301 2e-79
gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidops... 301 2e-79
gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virg... 301 2e-79
gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya... 300 3e-79
dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare] 300 3e-79
gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indi... 300 3e-79
gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta] 300 4e-79
ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Caps... 299 7e-79
gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella burs... 299 7e-79
>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
Length = 508
Score = 318 bits (814), Expect = 2e-84
Identities = 152/256 (59%), Positives = 200/256 (78%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTAL MYAK G +AR VFD + +NSVS+NTMI GYMRN KV A+ +FD MPE
Sbjct: 120 VMVGTALVAMYAKRGLVDVARLVFDDIKEKNSVSWNTMIDGYMRNGKVRDAVEVFDEMPE 179
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D VSWT +I G VK EEAL++FR MQ+ ++ DYVT++AV+AAC LGT+ LW+
Sbjct: 180 RDAVSWTALIGGFVKRRRFEEALEWFREMQVSSVEPDYVTVIAVLAACADLGTVGLGLWM 239
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
+R+I N N++++NSLIDMYS+CGC++FA QVFER+ +RTLVSWNS+IV FAVNG +
Sbjct: 240 NRFIMNRKFKDNVKISNSLIDMYSRCGCIEFARQVFERMPNRTLVSWNSIIVGFAVNGHA 299
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA++ F LMQR+GF+PDGVSFTG LTACSHAGLV+EGL+ +E +K + ++ +EHYGC
Sbjct: 300 EEALKFFNLMQREGFKPDGVSFTGALTACSHAGLVEEGLLLFENMKRVHGIRHRIEHYGC 359
Query: 50 LVDLLSRAGRLEEAMS 3
+VDL SRAGRLE+A++
Sbjct: 360 IVDLYSRAGRLEDALN 375
Score = 83.6 bits (205), Expect = 7e-14
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Frame = -1
Query: 596 PEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHAL 417
P + V WT I KN EA F M+L ++ ++VT + +++ C ++
Sbjct: 46 PIEPVVKWTSSIARHCKNGRFSEAAAEFSRMRLSGVEPNHVTFVTLLSGCAD-SNISFGA 104
Query: 416 WIHRYIKNHGL-SGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVN 240
IH Y + + N+ + +L+ MY+K G VD A VF+ I ++ VSWN+MI + N
Sbjct: 105 SIHGYARKLCFDTSNVMVGTALVAMYAKRGLVDVARLVFDDIKEKNSVSWNTMIDGYMRN 164
Query: 239 GRSR-------------------------------EAIEHFELMQRKGFEPDGVSFTGLL 153
G+ R EA+E F MQ EPD V+ +L
Sbjct: 165 GKVRDAVEVFDEMPERDAVSWTALIGGFVKRRRFEEALEWFREMQVSSVEPDYVTVIAVL 224
Query: 152 TACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
AC+ G V GL + + + V+ L+D+ SR G +E A
Sbjct: 225 AACADLGTVGLGLWMNRFI-MNRKFKDNVKISNSLIDMYSRCGCIEFA 271
Score = 62.0 bits (149), Expect = 2e-07
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Frame = -1
Query: 776 EELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRM 597
+ + + + ++MY++CG AR+VF+RMP R VS+N++I G+ N AL F+ M
Sbjct: 250 DNVKISNSLIDMYSRCGCIEFARQVFERMPNRTLVSWNSIIVGFAVNGHAEEALKFFNLM 309
Query: 596 PEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTL 429
+ D VS+T + C L+EE L F M+
Sbjct: 310 QREGFKPDGVSFTGALTACSHAGLVEEGLLLFENMK------------------------ 345
Query: 428 NHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFE 300
+ HG+ I ++D+YS+ G ++ A V E
Sbjct: 346 ----------RVHGIRHRIEHYGCIVDLYSRAGRLEDALNVIE 378
>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 312 bits (800), Expect = 8e-83
Identities = 150/258 (58%), Positives = 197/258 (76%), Gaps = 1/258 (0%)
Frame = -1
Query: 773 ELVVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRM 597
E V+ GTAL +MY+KCG +A +FD M VRNSVS+NTMI G MRN +VG A+ LFD+M
Sbjct: 125 ENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQM 184
Query: 596 PEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHAL 417
E+D +SWT +I G VK E+AL++FR MQL ++ DYVTI++V+AAC LG L L
Sbjct: 185 SERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGL 244
Query: 416 WIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNG 237
WI+R++ NI+++NSLIDMYS+CGC+ A QVFE++ R+LVSWNSMIV FA+NG
Sbjct: 245 WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNG 304
Query: 236 RSREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHY 57
+ EA+E F LM+++GF PDGVSFTG LTACSH+GLVDEGL F++ +K + + P +EHY
Sbjct: 305 HAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHY 364
Query: 56 GCLVDLLSRAGRLEEAMS 3
GCLVDL SRAGRLE+A++
Sbjct: 365 GCLVDLYSRAGRLEDALN 382
Score = 91.7 bits (226), Expect = 3e-16
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTG--LGTLNHALWIH 408
VSWT I +N L EA F MQ+ + +++T L +++ACT L L IH
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 407 RYIKNHGL-SGNIRLANSLIDMYSKCGCVDFAH--------------------------- 312
Y++ GL + N+ + +L+DMYSKCG +D A
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 311 ----QVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
+F+++ +R +SW SMI F G +A+E F MQ G EPD V+ +L AC
Sbjct: 175 GEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAAC 234
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAG 24
++ G + GL + + + ++ L+D+ SR G
Sbjct: 235 ANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCG 273
Score = 67.0 bits (162), Expect = 7e-09
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + + + + ++MY++CG +AR+VF++MP R+ VS+N+MI G+ N AL F
Sbjct: 254 DFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFF 313
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQ 501
+ M ++ D VS+T + C + L++E L +F M+
Sbjct: 314 NLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMK 352
>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 504
Score = 310 bits (795), Expect = 3e-82
Identities = 150/256 (58%), Positives = 193/256 (75%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTAL +MYAK G AR F M V+NS+S+NT+I GYM+ V A+ +FD MP+
Sbjct: 118 VIVGTALIDMYAKSGRVEFARLAFGGMEVKNSMSWNTLIDGYMKMGNVRDAVEVFDEMPK 177
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D VSWT +I G VK E+AL++FR MQ+ ++ DYVTI+AVIAAC LGTL LW+
Sbjct: 178 RDAVSWTTLIGGFVKKRRYEDALEWFREMQVSGVEPDYVTIIAVIAACADLGTLGLGLWV 237
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
+R++ NIR++NSLIDMYS+CGC+DFA QVF + +RTLVSWNSMIV FAVNG +
Sbjct: 238 NRFVTKQHFRHNIRISNSLIDMYSRCGCIDFARQVFGNMPNRTLVSWNSMIVGFAVNGHA 297
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA+E F MQ++GF+PDGVSFTG LTACSHAGLVDEGL F++ +K + + P +EHYGC
Sbjct: 298 EEALEFFHQMQKEGFKPDGVSFTGALTACSHAGLVDEGLHFFDKMKRIHKITPRIEHYGC 357
Query: 50 LVDLLSRAGRLEEAMS 3
+VDL SRAGRLE+A+S
Sbjct: 358 IVDLYSRAGRLEDALS 373
Score = 74.7 bits (182), Expect = 3e-11
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALW--IH 408
V WT I+ +N L +A+ F M+ +++ +++T + +++ C +H
Sbjct: 46 VLWTSSISQRCRNGQLAQAVSQFIQMRRARVEPNHITFVTLLSGCAHFPAKAAFFGPSLH 105
Query: 407 RYIKNHGLSG-NIRLANSLIDMYSKCGCVDFAH--------------------------- 312
Y+ GL N+ + +LIDMY+K G V+FA
Sbjct: 106 AYVCKLGLDRTNVIVGTALIDMYAKSGRVEFARLAFGGMEVKNSMSWNTLIDGYMKMGNV 165
Query: 311 ----QVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
+VF+ + R VSW ++I F R +A+E F MQ G EPD V+ ++ AC
Sbjct: 166 RDAVEVFDEMPKRDAVSWTTLIGGFVKKRRYEDALEWFREMQVSGVEPDYVTIIAVIAAC 225
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
+ G + GL + + + + L+D+ SR G ++ A
Sbjct: 226 ADLGTLGLGL-WVNRFVTKQHFRHNIRISNSLIDMYSRCGCIDFA 269
>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 308 bits (789), Expect = 1e-81
Identities = 151/256 (58%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTAL +MYAKCG AR FD+M VRN VS+NTMI GYMRN K AL +FD +P
Sbjct: 130 VMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPV 189
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
K+ +SWT +I G VK D EEAL+ FR MQL + DYVT++AVIAAC LGTL LW+
Sbjct: 190 KNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWV 249
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HR + N++++NSLIDMYS+CGC+D A QVF+R+ RTLVSWNS+IV FAVNG +
Sbjct: 250 HRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLA 309
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA+ +F MQ +GF+PDGVS+TG L ACSHAGL+ EGL +E +K + P +EHYGC
Sbjct: 310 DEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGC 369
Query: 50 LVDLLSRAGRLEEAMS 3
LVDL SRAGRLEEA++
Sbjct: 370 LVDLYSRAGRLEEALN 385
Score = 90.1 bits (222), Expect = 8e-16
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 36/265 (13%)
Frame = -1
Query: 695 RMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDK-VSWTVVINGCVKNDLLEEALD 519
+ P NS+ T N LSL D VSWT I K+ L +A
Sbjct: 18 KSPSSNSLPNQTHSTFSNTNTNTNQGLSLRHTTKYNDPIVSWTTSIADYCKSGHLVKAAS 77
Query: 518 YFRAMQLHQIDADYVTILAVIAACT---GLGTLNHALWIHRYIKNHGLSGN-IRLANSLI 351
F M+ I+ +++T + +++AC +++ IH +++ GL N + + +LI
Sbjct: 78 KFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALI 137
Query: 350 DMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGR--------------------- 234
DMY+KCG V+ A F+++ R LVSWN+MI + NG+
Sbjct: 138 DMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTA 197
Query: 233 ----------SREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASY 84
EA+E F MQ G PD V+ ++ AC++ G + GL + L +
Sbjct: 198 LIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHR-LVMTQ 256
Query: 83 NLQPTVEHYGCLVDLLSRAGRLEEA 9
+ + V+ L+D+ SR G ++ A
Sbjct: 257 DFRNNVKVSNSLIDMYSRCGCIDLA 281
Score = 66.2 bits (160), Expect = 1e-08
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + V + ++MY++CG +AR+VFDRMP R VS+N++I G+ N ALS F
Sbjct: 257 DFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADEALSYF 316
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAM-QLHQIDADYVTILAVIAACTG 441
+ M E+ D VS+T + C L+ E L F M ++ +I ++ +
Sbjct: 317 NSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSR 376
Query: 440 LGTLNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILD 288
G L AL +KN + N + SL+ G + A V +++
Sbjct: 377 AGRLEEAL---NVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIE 424
>gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 509
Score = 308 bits (788), Expect = 2e-81
Identities = 143/258 (55%), Positives = 193/258 (74%), Gaps = 1/258 (0%)
Frame = -1
Query: 776 EELVVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDR 600
+E V+ GTAL MYAKCG+ +A+ VFD M V+N VS+NTM+ GYMRN + A+ +FD
Sbjct: 115 KENVMVGTALVEMYAKCGHVKVAKLVFDVMRVKNLVSWNTMVDGYMRNGEYEKAVEIFDE 174
Query: 599 MPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHA 420
MP++D +SWT +ING + EEALD+FR M + + DYV I+AV+ AC LG L
Sbjct: 175 MPQRDVISWTALINGFARRGFHEEALDWFREMMIFGVKPDYVVIIAVLTACANLGALGVG 234
Query: 419 LWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVN 240
LWIHR++ N+R+ NSLIDMYS+CGC++ A +VF+++ RTLVSWNS+IV FAVN
Sbjct: 235 LWIHRFVLKQSFRDNVRVNNSLIDMYSRCGCIELAREVFDKMQKRTLVSWNSIIVGFAVN 294
Query: 239 GRSREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEH 60
G + EA+++F+ MQ++GF+PDGVSFTG LTACSHAGLVDEGL ++ +K Y + P +EH
Sbjct: 295 GFAEEALKYFDSMQKEGFKPDGVSFTGALTACSHAGLVDEGLRYFGIMKRVYRISPRIEH 354
Query: 59 YGCLVDLLSRAGRLEEAM 6
+GC+VDL SRAG+LEEA+
Sbjct: 355 FGCIVDLYSRAGKLEEAL 372
>ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum]
gi|557095763|gb|ESQ36345.1| hypothetical protein
EUTSA_v10009524mg [Eutrema salsugineum]
Length = 500
Score = 306 bits (783), Expect = 7e-81
Identities = 142/255 (55%), Positives = 192/255 (75%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K G AR VFD M +NSV++NTMI GYMRN +V A+ +FD MP+
Sbjct: 115 VMVGTAILGMYSKRGRFRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVYDAVKMFDEMPD 174
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT ++NG VK EEAL +FR MQ+ ++ DYV I+A +AACT LG L+ LW+
Sbjct: 175 RDLISWTAMMNGFVKKGFHEEALAWFREMQISGVEPDYVAIIAALAACTNLGALSFGLWV 234
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ +H N+R++NSLID+Y +CGCV+FA QVF+++ RT+VSWNS+IV FA NG +
Sbjct: 235 HRYVMSHDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNA 294
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+PD V+FTG LTACSH GLV+EGL +++T+K Y + P +EHYGC
Sbjct: 295 DESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGC 354
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLE+A+
Sbjct: 355 LVDLYSRAGRLEDAL 369
Score = 81.3 bits (199), Expect = 4e-13
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 34/245 (13%)
Frame = -1
Query: 641 RNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILA 462
R N+ + ++ + VSWT I +N L +A F M+L ++ +++T +A
Sbjct: 23 RENQANPKIQKLNQSTSETTVSWTSRITLLSRNGRLADAAKEFSDMRLAGVEPNHITFIA 82
Query: 461 VIAACTGLGTLNHALW--IHRYIKNHGLSGN-IRLANSLIDMYSKCGCVDFAHQVFERIL 291
+++ C + + AL +H Y GL N + + +++ MYSK G A VF+ +
Sbjct: 83 LLSGCGDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRFRKARLVFDYME 142
Query: 290 DRTLVSWNSMIVCFAVNGR-------------------------------SREAIEHFEL 204
D+ V+WN+MI + NG+ EA+ F
Sbjct: 143 DKNSVTWNTMIDGYMRNGQVYDAVKMFDEMPDRDLISWTAMMNGFVKKGFHEEALAWFRE 202
Query: 203 MQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAG 24
MQ G EPD V+ L AC++ G + GL + + S++ + V L+DL R G
Sbjct: 203 MQISGVEPDYVAIIAALAACTNLGALSFGLWVHRYV-MSHDFKNNVRVSNSLIDLYCRCG 261
Query: 23 RLEEA 9
+E A
Sbjct: 262 CVEFA 266
Score = 67.0 bits (162), Expect = 7e-09
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = -1
Query: 665 NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQID 486
N++I Y R V A +FD+M ++ VSW VI G N +E+L YFR MQ
Sbjct: 251 NSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNADESLVYFRKMQEEGFK 310
Query: 485 ADYVTILAVIAACTGLGTLNHALWIHRYIK-NHGLSGNIRLANSLIDMYSKCGCVDFAHQ 309
D VT + AC+ +G + L + +K ++ +S I L+D+YS+ G ++ A +
Sbjct: 311 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCLVDLYSRAGRLEDALK 370
Query: 308 VFERI-LDRTLVSWNSMIVCFAVNGRSREAIE 216
V + + + V S++ NG + E E
Sbjct: 371 VVQSMPMKPNEVVIGSLLAACRTNGNNAELAE 402
>ref|XP_002299777.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847035|gb|EEE84582.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 439
Score = 306 bits (783), Expect = 7e-81
Identities = 141/256 (55%), Positives = 196/256 (76%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
++ GTAL +MYAKCG+ ++R FD + V+NS S+NTMI G++RN K+ A+ +FD MPE
Sbjct: 48 LMVGTALVDMYAKCGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPE 107
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+ +SWTV+ING VK L EEAL++FR MQ+ +++ D VTI+ V++AC LG L LW+
Sbjct: 108 RGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWV 167
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY GL N+++ NSLID+YS+CG ++ A QVFE++ +RTLVSWNS+I A NG +
Sbjct: 168 HRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFT 227
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA+EHF+LMQ++GF+P+ VSFTG LTACSH GLVDEGL +++ ++ + + P +EHYGC
Sbjct: 228 EEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGC 287
Query: 50 LVDLLSRAGRLEEAMS 3
+VDL SRAGRLE+AMS
Sbjct: 288 IVDLYSRAGRLEDAMS 303
Score = 87.4 bits (215), Expect = 5e-15
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 34/200 (17%)
Frame = -1
Query: 506 MQLHQIDADYVTILAVIAACTGLGTLNHALW--IHRYIKNHGLSG-NIRLANSLIDMYSK 336
M+L +ID ++VT + +++ C L + ++L +H Y + GL N+ + +L+DMY+K
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 335 CGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKG----------- 189
CG V+ + F+ + + SWN+MI F NG+ REAIE F+ M +G
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 188 --------------------FEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPT 69
EPD V+ +L+AC++ G + GL + L+
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHR-YALKKGLRDN 179
Query: 68 VEHYGCLVDLLSRAGRLEEA 9
V+ L+DL SR G +E A
Sbjct: 180 VKICNSLIDLYSRCGAIELA 199
Score = 62.4 bits (150), Expect = 2e-07
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Frame = -1
Query: 776 EELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRM 597
+ + + + +++Y++CG +AR+VF++M R VS+N++I G N AL FD M
Sbjct: 178 DNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLM 237
Query: 596 PEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQ-LHQIDADYVTILAVIAACTGLGT 432
++ + VS+T + C L++E L YF M+ +H+I ++ + G
Sbjct: 238 QKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGR 297
Query: 431 LNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERIL 291
L A+ + ++N + N + SL+ G V+ A ++ ++
Sbjct: 298 LEDAMSV---VQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLV 341
>gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
Length = 514
Score = 305 bits (781), Expect = 1e-80
Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 1/254 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTAL +MYAKCG AR F+ M VRN VS+NTMI GYMRN ++ AL +FD++P
Sbjct: 123 VMVGTALIDMYAKCGRVDFARLAFNHMRVRNLVSWNTMIDGYMRNGRIEDALQVFDQLPV 182
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
K+ +SWT +I G VK D EEAL+ FR MQL + DYVTI+AV+AAC LGTL LW+
Sbjct: 183 KNTISWTALIGGFVKKDFHEEALECFREMQLAGVAYDYVTIIAVVAACANLGTLGLGLWV 242
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HR + N+R++NSLIDMYS+CGC++ A QVF+R+ +RTLVSWNS+IV FAVNG +
Sbjct: 243 HRLVMTQAFRNNVRVSNSLIDMYSRCGCIELARQVFDRMPNRTLVSWNSIIVGFAVNGFA 302
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA+ +F MQ GF+PDGVS TG L ACSHAGL+++GL +E +K + P +EHYGC
Sbjct: 303 DEALNYFNSMQEAGFKPDGVSHTGALMACSHAGLINKGLKIFENMKRVLRISPRIEHYGC 362
Query: 50 LVDLLSRAGRLEEA 9
LVDL SRAGRLEEA
Sbjct: 363 LVDLYSRAGRLEEA 376
Score = 83.2 bits (204), Expect = 1e-13
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACT---GLGTLNHALWI 411
V+WT I K L +A F M+ I+ +++T++ +++ C +++ +
Sbjct: 50 VAWTSSIAQYCKGGHLVKAASEFVRMREANIEPNHITLITLLSVCAHHPSQSSISFGTIV 109
Query: 410 HRYIKNHGLSGN-IRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGR 234
H Y GL N + + +LIDMY+KCG VDFA F + R LVSWN+MI + NGR
Sbjct: 110 HGYACKMGLHVNDVMVGTALIDMYAKCGRVDFARLAFNHMRVRNLVSWNTMIDGYMRNGR 169
Query: 233 -------------------------------SREAIEHFELMQRKGFEPDGVSFTGLLTA 147
EA+E F MQ G D V+ ++ A
Sbjct: 170 IEDALQVFDQLPVKNTISWTALIGGFVKKDFHEEALECFREMQLAGVAYDYVTIIAVVAA 229
Query: 146 CSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
C++ G + GL + L + + V L+D+ SR G +E A
Sbjct: 230 CANLGTLGLGLWVHR-LVMTQAFRNNVRVSNSLIDMYSRCGCIELA 274
Score = 67.4 bits (163), Expect = 6e-09
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Frame = -1
Query: 683 RNSVSF-NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRA 507
RN+V N++I Y R + A +FDRMP + VSW +I G N +EAL+YF +
Sbjct: 252 RNNVRVSNSLIDMYSRCGCIELARQVFDRMPNRTLVSWNSIIVGFAVNGFADEALNYFNS 311
Query: 506 MQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKNH-GLSGNIRLANSLIDMYSKCG 330
MQ D V+ + AC+ G +N L I +K +S I L+D+YS+ G
Sbjct: 312 MQEAGFKPDGVSHTGALMACSHAGLINKGLKIFENMKRVLRISPRIEHYGCLVDLYSRAG 371
Query: 329 CVDFAHQVFERI 294
++ A V + +
Sbjct: 372 RLEEAWNVLKNM 383
>gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 303 bits (775), Expect = 6e-80
Identities = 143/256 (55%), Positives = 192/256 (75%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K G AR VFD M +NSV++NTMI GYMR+ +V +A+ LFD MPE
Sbjct: 103 VMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPE 162
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +ING VK EEAL +FR MQ+ + DYV I+A +AACT LG L+ LW+
Sbjct: 163 RDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWV 222
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ N NIR++NSLID+Y +CGCV+FA +VF+++ RT+VSWNS+IV FA NG +
Sbjct: 223 HRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA 282
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+PD V+FTG LTACSH GLV+EGL +++T+K + + P +EHYGC
Sbjct: 283 HESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGC 342
Query: 50 LVDLLSRAGRLEEAMS 3
LVDL SRAGRLE+A++
Sbjct: 343 LVDLYSRAGRLEDALN 358
Score = 75.9 bits (185), Expect = 2e-11
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALW--IH 408
VSWT I +N L EA F +M+L ++ +++T +A+++ C + + + AL +H
Sbjct: 31 VSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALGDLLH 90
Query: 407 RYIKNHGLSG-NIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWN------------ 267
Y GL ++ + +++ MYSK G A VF+ + D+ V+WN
Sbjct: 91 GYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQV 150
Query: 266 -------------------SMIVCFAVNGRSREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
+MI F G EA+ F MQ G +PD V+ L AC
Sbjct: 151 NNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAAC 210
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
+H G + GL + + + + + + L+DL R G +E A
Sbjct: 211 THLGALSFGLWVHRYV-MNQDFKNNIRVSNSLIDLYCRCGCVEFA 254
Score = 65.5 bits (158), Expect = 2e-08
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + V + +++Y +CG AREVFD+M R VS+N++I G+ N +L F
Sbjct: 230 DFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYF 289
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGL 438
+M E+ D V++T + C L+EE L YF+ M+
Sbjct: 290 RKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMK--------------------- 328
Query: 437 GTLNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFE 300
++H +S I L+D+YS+ G ++ A V +
Sbjct: 329 -------------RDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQ 361
>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Citrus sinensis]
Length = 509
Score = 301 bits (772), Expect = 1e-79
Identities = 140/256 (54%), Positives = 192/256 (75%), Gaps = 1/256 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTAL +MYAK G +A VFD M V++S ++N MI GYMR + SA+ +FD MP
Sbjct: 118 VMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPV 177
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT ++NG VK EEAL+ FR MQ+ ++ DYVTI++V+ AC +GTL LWI
Sbjct: 178 RDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWI 237
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ N+++ N+LID+YS+CGC++FA QVF+R+ RTLVSWNS+IV FAVNG
Sbjct: 238 HRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 297
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
EA+E+F MQ++GF+PDGVSFTG LTACSHAGL+++GL +++ +K Y + P +EHYGC
Sbjct: 298 GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGC 357
Query: 50 LVDLLSRAGRLEEAMS 3
+VDL SRAGRLE+A++
Sbjct: 358 IVDLYSRAGRLEDALN 373
Score = 78.6 bits (192), Expect = 2e-12
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGT--LNHALWIH 408
V WT I+ ++ + EA F M LH + +++T + +++ C + L IH
Sbjct: 46 VQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIH 105
Query: 407 RYIKNHGLS-GNIRLANSLIDMYSKCGCVDFAHQVFE----------------------- 300
+ GL N+ + +L+DMY+K G +D A VF+
Sbjct: 106 GLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDI 165
Query: 299 ----RILD----RTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
R+ D R +SW +++ F G EA+E F MQ G EPD V+ +L AC
Sbjct: 166 ESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNAC 225
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
++ G + GL + + + + V+ L+DL SR G +E A
Sbjct: 226 ANVGTLGIGLWIHRYV-LKQDFKDNVKVCNTLIDLYSRCGCIEFA 269
Score = 68.2 bits (165), Expect = 3e-09
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + + V T +++Y++CG AR+VF RM R VS+N++I G+ N VG AL F
Sbjct: 245 DFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 304
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAM-QLHQIDADYVTILAVIAACTG 441
+ M ++ D VS+T + C L+E+ L YF M +++++ ++ +
Sbjct: 305 NSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSR 364
Query: 440 LGTLNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILD 288
G L AL ++N + N + SL+ G + A ++ + ++D
Sbjct: 365 AGRLEDAL---NVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVD 412
>dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|215704291|dbj|BAG93131.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 301 bits (770), Expect = 2e-79
Identities = 137/239 (57%), Positives = 184/239 (76%)
Frame = -1
Query: 722 PHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKN 543
PH+A ++FD MPVR++V++NT+I+G MRN V +A +FD MP DKVSWT +I+GCVKN
Sbjct: 155 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 214
Query: 542 DLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKNHGLSGNIRLA 363
+EA+D FRAM L ++ DYVT++AVI+AC +G L +W+HR + GL N+R+A
Sbjct: 215 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 274
Query: 362 NSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFE 183
NSLIDMY++CG V+ A QVF + RT+VSWNSMIV FA NGR +A+EHFE M+R+GF+
Sbjct: 275 NSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFK 334
Query: 182 PDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEAM 6
PD V+FTG+LTACSH GL DEGL +Y+ ++A Y + +EHYGC+VDLL R+G+LEEAM
Sbjct: 335 PDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAM 393
Score = 61.2 bits (147), Expect = 4e-07
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = -1
Query: 764 VFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEK- 588
+ + ++MYA+CG +AR+VF M R VS+N+MI G+ N + A+ F+ M +
Sbjct: 273 IANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREG 332
Query: 587 ---DKVSWTVVINGCVKNDLLEEALDYFRAMQL-HQIDADYVTILAVIAACTGLGTLNHA 420
D V++T V+ C L +E L Y+ M+ + I A V+ G L A
Sbjct: 333 FKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEA 392
Query: 419 LWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILD 288
+ R + + N + +L+ G V A Q+ + +L+
Sbjct: 393 M---RVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLE 433
>ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza
sativa Japonica Group]
Length = 438
Score = 301 bits (770), Expect = 2e-79
Identities = 137/239 (57%), Positives = 184/239 (76%)
Frame = -1
Query: 722 PHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKN 543
PH+A ++FD MPVR++V++NT+I+G MRN V +A +FD MP DKVSWT +I+GCVKN
Sbjct: 66 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 125
Query: 542 DLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKNHGLSGNIRLA 363
+EA+D FRAM L ++ DYVT++AVI+AC +G L +W+HR + GL N+R+A
Sbjct: 126 GRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 185
Query: 362 NSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFE 183
NSLIDMY++CG V+ A QVF + RT+VSWNSMIV FA NGR +A+EHFE M+R+GF+
Sbjct: 186 NSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFK 245
Query: 182 PDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEAM 6
PD V+FTG+LTACSH GL DEGL +Y+ ++A Y + +EHYGC+VDLL R+G+LEEAM
Sbjct: 246 PDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAM 304
Score = 61.2 bits (147), Expect = 4e-07
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = -1
Query: 764 VFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEK- 588
+ + ++MYA+CG +AR+VF M R VS+N+MI G+ N + A+ F+ M +
Sbjct: 184 IANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREG 243
Query: 587 ---DKVSWTVVINGCVKNDLLEEALDYFRAMQL-HQIDADYVTILAVIAACTGLGTLNHA 420
D V++T V+ C L +E L Y+ M+ + I A V+ G L A
Sbjct: 244 FKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEA 303
Query: 419 LWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILD 288
+ R + + N + +L+ G V A Q+ + +L+
Sbjct: 304 M---RVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLE 344
>gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 301 bits (770), Expect = 2e-79
Identities = 141/255 (55%), Positives = 191/255 (74%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K G AR VFD M +NSV++NTMI GYMR+ +V +A+ LFD+MPE
Sbjct: 84 VMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPE 143
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
D +SWT ++NG VK EEAL +FR MQ+ + DYV I+A + ACT LG L+ LW+
Sbjct: 144 PDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALNACTNLGALSLGLWV 203
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ + N+R++NSLID+Y +CGCV+FA +VF+++ RT+VSWNS+IV FA NG +
Sbjct: 204 HRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA 263
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+P+ V+FTG LTACSH GLVDEGL F++++K YN+ P +EHYGC
Sbjct: 264 HESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGC 323
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLE+A+
Sbjct: 324 LVDLYSRAGRLEDAL 338
Score = 75.1 bits (183), Expect = 3e-11
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAAC----TGLGTLNHALW 414
VSWT I ++ L EA F M+L ++ ++T +A+++ C +G TL L
Sbjct: 12 VSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDLL- 70
Query: 413 IHRYIKNHGLSGN-IRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNG 237
H Y GL N + + +++ MYSK G V A VF+ + D+ V+WN+MI + +G
Sbjct: 71 -HGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSG 129
Query: 236 RSREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKAS 87
+ A++ F+ M EPD +S+T ++ G +E L+++ ++ S
Sbjct: 130 QVHNAVKLFDKMP----EPDLISWTAMVNGFVKKGFHEEALVWFREMQIS 175
Score = 62.8 bits (151), Expect = 1e-07
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = -1
Query: 665 NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQID 486
N++I Y R V A +FD+M ++ VSW VI G N E+L YFR MQ
Sbjct: 220 NSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFK 279
Query: 485 ADYVTILAVIAACTGLGTLNHALWIHRYIK-NHGLSGNIRLANSLIDMYSKCGCVDFAHQ 309
+ VT + AC+ +G ++ L + +K ++ +S I L+D+YS+ G ++ A +
Sbjct: 280 PNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALK 339
Query: 308 VFE 300
V +
Sbjct: 340 VVQ 342
>gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 301 bits (770), Expect = 2e-79
Identities = 139/254 (54%), Positives = 191/254 (75%), Gaps = 1/254 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K G+ AR VFD + +NSV++NTMI GYMRN +V +A+ +FD+MP+
Sbjct: 94 VMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPD 153
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +I G VK EEAL +FR MQ+ ++ DYV I++ +AACT LG L+ LW+
Sbjct: 154 RDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWV 213
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ + N+R++NSLID+Y +CGCV+FA QVF+++ RT+VSWNS+IV FA NG +
Sbjct: 214 HRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNA 273
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQR+GF PDGV+FTG LTACSH GLV+EG +++ +K Y + P +EHYGC
Sbjct: 274 NESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGC 333
Query: 50 LVDLLSRAGRLEEA 9
LVDL SRAGRLE+A
Sbjct: 334 LVDLYSRAGRLEDA 347
Score = 77.4 bits (189), Expect = 5e-12
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 34/245 (13%)
Frame = -1
Query: 641 RNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILA 462
R N + ++ + VSWT I ++ L EA+ F M+L I+ +++T +A
Sbjct: 2 RKNHANPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIA 61
Query: 461 VIAACTGLGTLNHALW--IHRYIKNHGLS-GNIRLANSLIDMYSKCGCVDFAHQVFERIL 291
+++AC + + L +H Y GL ++ + +++ MYSK G + A VF+ I
Sbjct: 62 LLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIE 121
Query: 290 DRTLVSWNSMIVCFAVNGR-------------------------------SREAIEHFEL 204
D+ V+WN+MI + NG+ EA+ F
Sbjct: 122 DKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFRE 181
Query: 203 MQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAG 24
MQ G PD V+ + AC++ G + GL + + S + + V L+DL R G
Sbjct: 182 MQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYV-LSQDFRNNVRVSNSLIDLYCRCG 240
Query: 23 RLEEA 9
+E A
Sbjct: 241 CVEFA 245
Score = 63.5 bits (153), Expect = 8e-08
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = -1
Query: 683 RNSVSF-NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRA 507
RN+V N++I Y R V A +FD+M ++ VSW VI G N E+L YFR
Sbjct: 223 RNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRK 282
Query: 506 MQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKN-HGLSGNIRLANSLIDMYSKCG 330
MQ D VT + AC+ +G + + +K+ + +S I L+D+YS+ G
Sbjct: 283 MQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAG 342
Query: 329 CVDFAHQVFE 300
++ A V E
Sbjct: 343 RLEDAFIVVE 352
Score = 59.7 bits (143), Expect = 1e-06
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + V + +++Y +CG AR+VFD+M R VS+N++I G+ N +L F
Sbjct: 221 DFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYF 280
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQ 501
+M + D V++T + C L+EE YF+ M+
Sbjct: 281 RKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMK 319
>gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 300 bits (769), Expect = 3e-79
Identities = 140/255 (54%), Positives = 191/255 (74%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTAL-NMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA+ MY+K G+ AR VFD M NSV++NTMI GYMR+ +V +A+ +FD+MPE
Sbjct: 100 VMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPE 159
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +ING VK EEAL +FR MQ+ + DYV I+A + ACT LG L+ LW+
Sbjct: 160 RDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWV 219
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ N N+R++NSLID+Y +CGCV+FA +VF+++ RT+VSWNS+IV FA NG +
Sbjct: 220 HRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA 279
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+PD V+FTG LTACSH GLV+EGL +++T+K Y + P +EHYGC
Sbjct: 280 HESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGC 339
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLE+A+
Sbjct: 340 LVDLYSRAGRLEDAL 354
Score = 74.3 bits (181), Expect = 5e-11
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Frame = -1
Query: 641 RNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILA 462
R N + ++ + VSWT I +N L EA F M+L ++ +++T +A
Sbjct: 8 RKNYGXPKIQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIA 67
Query: 461 VIAAC----TGLGTLNHALWIHRYIKNHGLSG-NIRLANSLIDMYSKCGCVDFAHQVFER 297
+++ C +G TL++ L H Y GL ++ + ++I MYSK G V A VF+
Sbjct: 68 LLSGCGDFPSGSETLSNLL--HGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDY 125
Query: 296 ILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEG 117
+ D V+WN+MI + +G+ A++ F+ M E D +S+T ++ G +E
Sbjct: 126 MEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMP----ERDLISWTAMINGFVKKGFHEEA 181
Query: 116 LMFYETLKAS 87
L+++ ++ S
Sbjct: 182 LVWFREMQIS 191
Score = 67.8 bits (164), Expect = 4e-09
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = -1
Query: 665 NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQID 486
N++I Y R V A +FD+M ++ VSW VI G N E+L YFR MQ
Sbjct: 236 NSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFK 295
Query: 485 ADYVTILAVIAACTGLGTLNHALWIHRYIK-NHGLSGNIRLANSLIDMYSKCGCVDFAHQ 309
D VT + AC+ +G + L + +K ++G+S I L+D+YS+ G ++ A +
Sbjct: 296 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALK 355
Query: 308 VFE 300
V E
Sbjct: 356 VIE 358
>dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 300 bits (769), Expect = 3e-79
Identities = 141/240 (58%), Positives = 182/240 (75%)
Frame = -1
Query: 722 PHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKN 543
PH+A ++F M VR+ V++NTMI G MRN V +A +FD MPE DKVSWT +I+GCVKN
Sbjct: 122 PHLALQLFGSMTVRSLVTYNTMITGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCVKN 181
Query: 542 DLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKNHGLSGNIRLA 363
+EA+D F AM L ++ DYVT++A I+AC +G L +W+HR + L GNIR+A
Sbjct: 182 GRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIA 241
Query: 362 NSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFE 183
NSLIDMY++CG V+FA QVF+ + +RT+VSWNSMIV FA NGR +AIEHFE M+RKGF
Sbjct: 242 NSLIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFR 301
Query: 182 PDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEAMS 3
PD V+FTG+LTACSHAGL DEGL +Y+ ++A + + +EHYGC+VDLL RAGRL EAMS
Sbjct: 302 PDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMS 361
Score = 71.2 bits (173), Expect = 4e-10
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Frame = -1
Query: 764 VFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEK- 588
+ + ++MYA+CG AR+VFD M R VS+N+MI G+ N + A+ F+ M K
Sbjct: 240 IANSLIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKG 299
Query: 587 ---DKVSWTVVINGCVKNDLLEEALDYFRAMQL-HQIDADYVTILAVIAACTGLGTLNHA 420
D V++T V+ C L +E L Y++AM+ H I A V+ G L A
Sbjct: 300 FRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEA 359
Query: 419 LWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDR 285
+ + + + N + +L+ G VD A Q+ + +L++
Sbjct: 360 MSV---VATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHLLEQ 401
>gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 300 bits (769), Expect = 3e-79
Identities = 137/239 (57%), Positives = 184/239 (76%)
Frame = -1
Query: 722 PHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKN 543
PH+A ++FD MPVR++V++NT+I+G MRN V +A +FD MP DKVSWT +I+GCVKN
Sbjct: 121 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 180
Query: 542 DLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWIHRYIKNHGLSGNIRLA 363
+EA++ FRAM L ++ DYVT++AVI+AC +G L +W+HR + GL N+R+A
Sbjct: 181 GRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIA 240
Query: 362 NSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRSREAIEHFELMQRKGFE 183
NSLIDMY++CG V+ A QVF + RT+VSWNSMIV FA NGR +A+EHFE M+R+GF+
Sbjct: 241 NSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFK 300
Query: 182 PDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEAM 6
PD V+FTG+LTACSH GL DEGL +Y+ ++A Y + +EHYGC+VDLL R+GRLEEAM
Sbjct: 301 PDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAM 359
Score = 61.2 bits (147), Expect = 4e-07
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = -1
Query: 764 VFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPEK- 588
+ + ++MYA+CG +AR+VF M R VS+N+MI G+ N + A+ F+ M +
Sbjct: 239 IANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREG 298
Query: 587 ---DKVSWTVVINGCVKNDLLEEALDYFRAMQL-HQIDADYVTILAVIAACTGLGTLNHA 420
D V++T V+ C L +E L Y+ M+ + I A V+ G L A
Sbjct: 299 FKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEA 358
Query: 419 LWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILD 288
+ R + + N + +L+ G V A Q+ + +L+
Sbjct: 359 M---RVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLE 399
>gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 300 bits (768), Expect = 4e-79
Identities = 141/255 (55%), Positives = 189/255 (74%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K G AR VFD M +NSV++NTMI GYMRN +V A+ LFD MPE
Sbjct: 52 VMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPE 111
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +ING VK EEAL +FR MQ+ + DYV I+A +AACT LG L+ LWI
Sbjct: 112 RDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWI 171
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ + N+R++NSLID+Y +CGCV+FA QVF+++ RT+VSWNS+IV FA NG +
Sbjct: 172 HRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHA 231
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+P+ V+FTG L AC+H GLV+EGL +++++K Y + P +EHYGC
Sbjct: 232 HESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGC 291
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLE+A+
Sbjct: 292 LVDLYSRAGRLEDAL 306
Score = 62.4 bits (150), Expect = 2e-07
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = -1
Query: 665 NTMIAGYMRNNKVGSALSLFDRMPEKDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQID 486
N++I Y R V A +FD+M ++ VSW VI G N E+L YFR MQ
Sbjct: 188 NSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFK 247
Query: 485 ADYVTILAVIAACTGLGTLNHALWIHRYIK-NHGLSGNIRLANSLIDMYSKCGCVDFAHQ 309
+ VT +AAC +G + L + +K ++ +S I L+D+YS+ G ++ A +
Sbjct: 248 PNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALK 307
Query: 308 VFE 300
V +
Sbjct: 308 VVQ 310
Score = 60.5 bits (145), Expect = 7e-07
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Frame = -1
Query: 515 FRAMQLHQIDADYVTILAVIAACTGLGTLNHALW--IHRYIKNHGLS-GNIRLANSLIDM 345
F M+L ++ +++T +A+++ L + + AL +H Y GL ++ + +++ M
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 344 YSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGR----------------------- 234
YSK G A VF+ + ++ V+WN+MI + NG+
Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121
Query: 233 --------SREAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNL 78
EA+ F MQ G +PD V+ L AC++ G + GL + + S +
Sbjct: 122 NGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYV-VSQDF 180
Query: 77 QPTVEHYGCLVDLLSRAGRLEEA 9
+ V L+DL R G +E A
Sbjct: 181 KNNVRVSNSLIDLYCRCGCVEFA 203
>ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Capsella rubella]
gi|482572309|gb|EOA36496.1| hypothetical protein
CARUB_v10011161mg [Capsella rubella]
Length = 506
Score = 299 bits (766), Expect = 7e-79
Identities = 139/255 (54%), Positives = 191/255 (74%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K AR VFD M +NSV++NTMI GYMRN +V +A+ +FD+MPE
Sbjct: 115 VMVGTAILGMYSKRSRVKKARLVFDYMEDKNSVTWNTMINGYMRNGQVDNAVKMFDKMPE 174
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +ING VK EEAL +FR MQ+ + DYV I+A + ACT LG L+ LW+
Sbjct: 175 RDFISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV 234
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ + N++++NSLID+Y +CGCV+FA +VF+++ RT+VSWNS+IV FA NG +
Sbjct: 235 HRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA 294
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+PD V+FTG LTACSH GLV+EGL +++T+K ++ + P +EHYGC
Sbjct: 295 HESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRNHRISPRIEHYGC 354
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLEEA+
Sbjct: 355 LVDLYSRAGRLEEAL 369
Score = 76.3 bits (186), Expect = 1e-11
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALW--IH 408
VSWT I +N L EA F M+L ++ +++T +A+++ C + + AL +H
Sbjct: 43 VSWTSRITLLTRNGRLAEAAKEFSNMRLAGVEPNHITFIALLSGCGDFSSGSEALGDLLH 102
Query: 407 RYIKNHGLSG-NIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGR- 234
Y GL ++ + +++ MYSK V A VF+ + D+ V+WN+MI + NG+
Sbjct: 103 GYACKLGLDRTHVMVGTAILGMYSKRSRVKKARLVFDYMEDKNSVTWNTMINGYMRNGQV 162
Query: 233 ------------------------------SREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
EA+ F MQ G +PD V+ L AC
Sbjct: 163 DNAVKMFDKMPERDFISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNAC 222
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
++ G + GL + + S + + V+ L+DL R G +E A
Sbjct: 223 TNLGALSFGLWVHRYV-MSQDFKNNVKVSNSLIDLYCRCGCVEFA 266
Score = 67.8 bits (164), Expect = 4e-09
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + V + +++Y +CG AREVFD+M R VS+N++I G+ N +L F
Sbjct: 242 DFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYF 301
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGL 438
+M E+ D V++T + C L+EE L YF+ M+
Sbjct: 302 RKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMK--------------------- 340
Query: 437 GTLNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFE 300
+NH +S I L+D+YS+ G ++ A +V +
Sbjct: 341 -------------RNHRISPRIEHYGCLVDLYSRAGRLEEALKVVQ 373
>gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 299 bits (766), Expect = 7e-79
Identities = 139/255 (54%), Positives = 190/255 (74%), Gaps = 1/255 (0%)
Frame = -1
Query: 767 VVFGTA-LNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLFDRMPE 591
V+ GTA L MY+K AR VFD M +NSV++NTMI GYMRN +V +A+ +FD+MPE
Sbjct: 98 VMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPE 157
Query: 590 KDKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALWI 411
+D +SWT +ING VK EEAL +FR MQ+ + DYV I+A + ACT LG L+ LW+
Sbjct: 158 RDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV 217
Query: 410 HRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGRS 231
HRY+ + N++++NSLID+Y +CGCV+FA +VF+++ RT+VSWNS+IV FA NG +
Sbjct: 218 HRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA 277
Query: 230 REAIEHFELMQRKGFEPDGVSFTGLLTACSHAGLVDEGLMFYETLKASYNLQPTVEHYGC 51
E++ +F MQ +GF+PD V+FTG LTACSH GLV+EGL +++T+K + + P +EHYGC
Sbjct: 278 HESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGC 337
Query: 50 LVDLLSRAGRLEEAM 6
LVDL SRAGRLEEA+
Sbjct: 338 LVDLYSRAGRLEEAL 352
Score = 73.6 bits (179), Expect = 8e-11
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Frame = -1
Query: 581 VSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGLGTLNHALW--IH 408
VSWT I +N L EA F M+L ++ +++T +A+++ C + + AL +H
Sbjct: 26 VSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDLLH 85
Query: 407 RYIKNHGLSG-NIRLANSLIDMYSKCGCVDFAHQVFERILDRTLVSWNSMIVCFAVNGR- 234
Y G ++ + +++ MYSK V A VF+ + D+ V+WN+MI + NG+
Sbjct: 86 GYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNGQV 145
Query: 233 ------------------------------SREAIEHFELMQRKGFEPDGVSFTGLLTAC 144
EA+ F MQ G +PD V+ L AC
Sbjct: 146 DNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNAC 205
Query: 143 SHAGLVDEGLMFYETLKASYNLQPTVEHYGCLVDLLSRAGRLEEA 9
++ G + GL + + S + + V+ L+DL R G +E A
Sbjct: 206 TNLGALSFGLWVHRYV-MSQDFKNNVKVSNSLIDLYCRCGCVEFA 249
Score = 65.9 bits (159), Expect = 2e-08
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Frame = -1
Query: 785 DASEELVVFGTALNMYAKCGNPHIAREVFDRMPVRNSVSFNTMIAGYMRNNKVGSALSLF 606
D + V + +++Y +CG AREVFD+M R VS+N++I G+ N +L F
Sbjct: 225 DFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYF 284
Query: 605 DRMPEK----DKVSWTVVINGCVKNDLLEEALDYFRAMQLHQIDADYVTILAVIAACTGL 438
+M E+ D V++T + C L+EE L YF+ M+
Sbjct: 285 RKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMK--------------------- 323
Query: 437 GTLNHALWIHRYIKNHGLSGNIRLANSLIDMYSKCGCVDFAHQVFE 300
++H +S I L+D+YS+ G ++ A +V +
Sbjct: 324 -------------RDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQ 356