BLASTX nr result
ID: Zingiber25_contig00032068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00032068
(544 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts... 92 8e-17
ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts... 92 8e-17
ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts... 83 5e-14
ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13
ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13
ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts... 80 4e-13
ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts... 79 9e-13
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 78 2e-12
ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts... 77 3e-12
gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus... 76 6e-12
gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus... 76 6e-12
gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus pe... 76 6e-12
ref|XP_003611424.1| Regulator of nonsense transcripts-like prote... 75 1e-11
gb|EPS67765.1| hypothetical protein M569_07005, partial [Genlise... 75 1e-11
ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts... 74 2e-11
ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 73 5e-11
ref|XP_002329539.1| predicted protein [Populus trichocarpa] gi|5... 72 7e-11
ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts... 72 1e-10
gb|EXC26734.1| Regulator of nonsense transcripts 1-like protein ... 70 3e-10
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 70 3e-10
>ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
tuberosum]
Length = 1264
Score = 92.0 bits (227), Expect = 8e-17
Identities = 58/126 (46%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNLY+TASQPDTG DAYTFLEFNTQ + DYP+FQELSQ
Sbjct: 6 NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQPIRSSAWPTPSDSLVSEVP-- 63
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
P S+ SPS + VD LAAGMSGLNFEETG D
Sbjct: 64 ----DRPPSSEASPSTKS-----RGGGGNSNVSSSSNQASVVDALAAGMSGLNFEETGDD 114
Query: 18 EGYEFG 1
EG+E+G
Sbjct: 115 EGFEYG 120
>ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
lycopersicum]
Length = 1264
Score = 92.0 bits (227), Expect = 8e-17
Identities = 58/126 (46%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNLY+TASQPDTG DAYTFLEFNTQ + DYP+FQELSQ
Sbjct: 6 NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQPIRSSAWPTPSDSLVSEVP-- 63
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
P S+ SPS + VD LAAGMSGLNFEETG D
Sbjct: 64 ----DRPPSSEASPSTKS-----RGGGGNSNVSSSSNQASVVDALAAGMSGLNFEETGDD 114
Query: 18 EGYEFG 1
EG+E+G
Sbjct: 115 EGFEYG 120
>ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
tuberosum]
Length = 1267
Score = 82.8 bits (203), Expect = 5e-14
Identities = 56/132 (42%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -2
Query: 393 MAAQSVNNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXX 214
M +QS N+LY+TASQPDTG DAYTFLEFNTQ + DYP+F ELSQ
Sbjct: 1 MDSQS-NSLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLV 59
Query: 213 XXXXXXXSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNF 34
+ S+ S ++ AVD LAAGMSGLNF
Sbjct: 60 SEAPD-----RPQSSSDASQASGKSRGGDGGRSSSSKISSNKAAAVAVDALAAGMSGLNF 114
Query: 33 EETG-DEGYEFG 1
EETG DE +E+G
Sbjct: 115 EETGDDESFEYG 126
>ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
[Cicer arietinum]
Length = 1259
Score = 81.6 bits (200), Expect = 1e-13
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGA 65
Query: 195 XSDLQTPESTV-LSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG- 22
SD Q+ S V ++P ++T VD+LAAGMSGLNFE+TG
Sbjct: 66 VSDHQSDASPVSVTPGSAT----------KGRSGSGGGSSQMVDSLAAGMSGLNFEDTGD 115
Query: 21 DEGYEFG 1
D+ YE+G
Sbjct: 116 DDNYEYG 122
>ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Cicer arietinum]
Length = 1261
Score = 81.6 bits (200), Expect = 1e-13
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGA 65
Query: 195 XSDLQTPESTV-LSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG- 22
SD Q+ S V ++P ++T VD+LAAGMSGLNFE+TG
Sbjct: 66 VSDHQSDASPVSVTPGSAT----------KGRSGSGGGSSQMVDSLAAGMSGLNFEDTGD 115
Query: 21 DEGYEFG 1
D+ YE+G
Sbjct: 116 DDNYEYG 122
>ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 79.7 bits (195), Expect = 4e-13
Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQE-LSQXXXXXXXXXXXXXXXXXXXX 199
NNL+ETASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPLERGGG 65
Query: 198 XXSDLQTPESTV-LSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG 22
SD Q+ S V ++P ++T VD LAAGMSGLNFE+TG
Sbjct: 66 GGSDHQSDASPVSVAPGSAT--------KGGRSGSGGGNSSQMVDALAAGMSGLNFEDTG 117
Query: 21 -DEGYEFG 1
D+ YE+G
Sbjct: 118 DDDNYEYG 125
>ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
lycopersicum]
Length = 1274
Score = 78.6 bits (192), Expect = 9e-13
Identities = 51/126 (40%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
N+LY+TASQPDTG D YTFLEFNTQ + DYP+F ELSQ
Sbjct: 6 NSLYDTASQPDTGNDVYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLVSEVPDR 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+ +++ S + AVD LAAGMSGLNFEETG D
Sbjct: 66 PQ--SSSDASQASGKSRGGDGGRSRSSSSSKISSNKAAAVAVDALAAGMSGLNFEETGDD 123
Query: 18 EGYEFG 1
E +E+G
Sbjct: 124 ENFEYG 129
>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
product [Vitis vinifera]
Length = 1267
Score = 77.8 bits (190), Expect = 2e-12
Identities = 53/127 (41%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNLY+TASQPDTG DAYTF+EFNTQ + DYP F++
Sbjct: 6 NNLYDTASQPDTGNDAYTFIEFNTQGEDFDYPDFRD--------PIRPSAWPTPSDSISD 57
Query: 195 XSDLQTPESTV-LSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG- 22
+D Q+ S V +P ++T AVD LAAGMSGLNFEETG
Sbjct: 58 AADHQSDASPVSAAPGSAT--------KARGAAGSSSSSQAAVDALAAGMSGLNFEETGD 109
Query: 21 DEGYEFG 1
D+ YE+G
Sbjct: 110 DDNYEYG 116
>ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1268
Score = 77.0 bits (188), Expect = 3e-12
Identities = 50/126 (39%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL+ETASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGG 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+S SP ++ P VD LAAGMSGLNFE+TG D
Sbjct: 66 GGGGSDHQSDT-SPVSAAP--GSATKGGRSGSGGGGNSSQMVDALAAGMSGLNFEDTGDD 122
Query: 18 EGYEFG 1
+ YE+G
Sbjct: 123 DNYEYG 128
>gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
Length = 1268
Score = 75.9 bits (185), Expect = 6e-12
Identities = 49/126 (38%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGAV 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+S SP ++ P VD LAAGMSGLNFE+TG D
Sbjct: 66 GGPGSDHQSDA-SPVSAAP---GSATKGGRSGNGGGHSSQMVDALAAGMSGLNFEDTGDD 121
Query: 18 EGYEFG 1
+ YE+G
Sbjct: 122 DNYEYG 127
>gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
Length = 1248
Score = 75.9 bits (185), Expect = 6e-12
Identities = 49/126 (38%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGAV 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+S SP ++ P VD LAAGMSGLNFE+TG D
Sbjct: 66 GGPGSDHQSDA-SPVSAAP---GSATKGGRSGNGGGHSSQMVDALAAGMSGLNFEDTGDD 121
Query: 18 EGYEFG 1
+ YE+G
Sbjct: 122 DNYEYG 127
>gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus persica]
Length = 1276
Score = 75.9 bits (185), Expect = 6e-12
Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL+ETASQPDTG DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLSDPTDRDRG 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+ + + SP ++ P VD LA GMS LNFE+TG D
Sbjct: 66 GGGVGSDHQSDASPVSAAP--GSATKARAGGSGSSGGNNQVVDVLAGGMSVLNFEDTGDD 123
Query: 18 EGYEFG 1
+ YE+G
Sbjct: 124 DNYEYG 129
>ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula] gi|355512759|gb|AES94382.1| Regulator of
nonsense transcripts-like protein [Medicago truncatula]
Length = 1253
Score = 75.1 bits (183), Expect = 1e-11
Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDTG DAYTFLEFNTQ + DYP F++ +
Sbjct: 6 NNLFDTASQPDTGTDAYTFLEFNTQGEDFDYPDFRDPIRSPVAW---------------- 49
Query: 195 XSDLQTPESTVLSPSAS---------TPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSG 43
TP ++ PS S +P+ VD+LA+GMSG
Sbjct: 50 ----PTPSDSLADPSGSAGSDHHSDASPV-SAAPTKGGRSGGGSGSGSQMVDSLASGMSG 104
Query: 42 LNFEETG-DEGYEFG 1
LNFE+TG D+ YEFG
Sbjct: 105 LNFEDTGDDDNYEFG 119
>gb|EPS67765.1| hypothetical protein M569_07005, partial [Genlisea aurea]
Length = 1245
Score = 74.7 bits (182), Expect = 1e-11
Identities = 49/137 (35%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Frame = -2
Query: 402 GLAMAAQSVNNLYETASQPDTGGDAYTFLEFNTQDDFD-DYPQFQELSQXXXXXXXXXXX 226
G++ ++LYET SQPDTG DAYTF+EFNTQ + D DYP+FQELSQ
Sbjct: 9 GISPMDSQTSDLYETLSQPDTGNDAYTFIEFNTQGEEDFDYPEFQELSQPIRSAASVWPP 68
Query: 225 XXXXXXXXXXXSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMS 46
D+ +P T L S + ++L AGMS
Sbjct: 69 HTDSKSPS----DVASPSETTLGGSKTLGGVGGGVAHNGGGSNYSSKDAGVEESLTAGMS 124
Query: 45 GLNFEET--GDEGYEFG 1
GLNFE+ D+ +E+G
Sbjct: 125 GLNFEDPVGDDDVFEYG 141
>ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/126 (37%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL+ETASQPDT DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGG 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+P ++T VD LAAGMSGL FE+TG D
Sbjct: 66 SDHQSDASPVSAAPGSAT------KGRTGGGSGNTGGNNQMVDALAAGMSGLTFEDTGDD 119
Query: 18 EGYEFG 1
+ YEFG
Sbjct: 120 DNYEFG 125
>ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 72.8 bits (177), Expect = 5e-11
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL+ETASQPDT DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGG 65
Query: 195 XSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG-D 19
+P ++T VD LAAGMSGL F++TG D
Sbjct: 66 SDHQSDASPVSAAPGSAT------KGRTGGGSGNTGGNNQMVDALAAGMSGLTFKDTGDD 119
Query: 18 EGYEFG 1
+ YEFG
Sbjct: 120 DNYEFG 125
>ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|566161589|ref|XP_006385597.1| RNA helicase family
protein [Populus trichocarpa]
gi|550342726|gb|ERP63394.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1242
Score = 72.4 bits (176), Expect = 7e-11
Identities = 52/127 (40%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFD-DYPQFQELSQXXXXXXXXXXXXXXXXXXXX 199
NNLYETASQPDT DAYTFLEFNTQ + D DYP+F+
Sbjct: 6 NNLYETASQPDTATDAYTFLEFNTQGESDFDYPEFR---SPVAWPTPSDSLGATSSAVDP 62
Query: 198 XXSDLQTPESTVLSPSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG- 22
SD +T ST S S V+ L A + GLNFEETG
Sbjct: 63 TSSDHRTAASTPDLHSDSLAASPVASKSAARGGGANSGTQGVVEGLVASIGGLNFEETGD 122
Query: 21 DEGYEFG 1
D+GYEFG
Sbjct: 123 DDGYEFG 129
>ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Fragaria
vesca subsp. vesca]
Length = 1277
Score = 71.6 bits (174), Expect = 1e-10
Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
NNL++TASQPDT DAYTFLEFNTQ + DYP+F++ +
Sbjct: 6 NNLFDTASQPDTATDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLSDPADRGGG 65
Query: 195 XSDLQTPESTVLSPSASTP--LXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLNFEETG 22
+ + SP ++ P VD LA+GMS LNFE+TG
Sbjct: 66 GGGAGSDHQSDASPVSAAPGSATKARAGGSGSSGGNNSSNNQVVDALASGMSVLNFEDTG 125
Query: 21 -DEGYEFG 1
D+ YEFG
Sbjct: 126 DDDSYEFG 133
>gb|EXC26734.1| Regulator of nonsense transcripts 1-like protein [Morus notabilis]
Length = 1267
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFDDYPQFQELSQXXXXXXXXXXXXXXXXXXXXX 196
+NL++ ASQPDT DAYTFLEFNTQ + DYP+F++
Sbjct: 6 SNLFDAASQPDTANDAYTFLEFNTQGEDFDYPEFRD--------------------PIRS 45
Query: 195 XSDLQTPESTVLSP-------------SASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAA 55
TP ++ P S ++P+ VD+LAA
Sbjct: 46 SVSWPTPSDSLSDPADRGGGPGGTDHQSDASPVSTSGPGIASKGRPGSSASNQVVDSLAA 105
Query: 54 GMSGLNFEETG-DEGYEFG 1
GMSGLNFE+TG D+ Y++G
Sbjct: 106 GMSGLNFEDTGDDDSYDYG 124
>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 70.1 bits (170), Expect = 3e-10
Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Frame = -2
Query: 375 NNLYETASQPDTGGDAYTFLEFNTQDDFD-DYPQFQELSQXXXXXXXXXXXXXXXXXXXX 199
+NLYETASQPDTG DAYTFLEFNTQ + D DYP+F+
Sbjct: 6 SNLYETASQPDTGTDAYTFLEFNTQGESDFDYPEFRSPVAWPTPSDSLAAATSSSSAVDP 65
Query: 198 XXSDLQTPESTVLS------PSASTPLXXXXXXXXXXXXXXXXXXXXAVDTLAAGMSGLN 37
SD + + S SA+ V+ + + M GLN
Sbjct: 66 TASDHRGAAAAATSSDHHSADSAAAASSPVSSSSSSKAMRGGSNSQGVVEGIVSAMGGLN 125
Query: 36 FEETGDE-GYEFG 1
FEETGDE GYEFG
Sbjct: 126 FEETGDEDGYEFG 138